Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->AHL20(2) -------->HSFB2a(2)                                                                     <---------AHL20(2) ---------HSFB2a(2)                                                                 --------->AHL20(2) -->GAMYB           <---------TOE1(2)                     <----------DOF2           <---------AHL20(2) --DOF5.7(2)        <---------TOE2(2)                     --------->TOE2(3)        <---------AHL20(2) -WRKY45         <---------ANAC46                      <-----------GT1             --------->AHL20(1) -WRKY38(1)  <---------GLK1(1)                      --------->YAB1                 --------->AHL20(2) -WRKY12    <---------GLK1(2)                  --------->AHL20(2)                  <---------AHL20(1) -HVH21<----------DOF2             <----------DOF2<---------YAB1        <----------DOF2<---------AHL20(2)   ctctagaggctttggattttcgtagatttatcaaactcttttcttcagatttattaataactttagcagtttagcttttgcataatttatttatttcttc  8816800                                <---------KAN4(1)                                --------->KAN4(1)                               <---------KAN4(2)                              --------->YAB1                    <----------DOF2                 --------->ARR14(2)                 <---------ARR11(3)                 --------->ARR11(3)                 <---------ARR14(2)                 <---------ARR11(1)                                  <---------CCA1(2)                <---------ARR14(1)                    <---------ATHB12                <---------CCA1(2)       --------->AHL20(2)       <---------ANAC55(2)             <---      --------->STY1(2)--------->HSFB2a(2) <---------AHL20(1)    <---------ANAC46         <---------TOE2(3)      <---------STY1(2)<---------HSFB2a(2) --------->AHL20(1)  --------->AHL20(2)----------->GT1-----   aatcgactagctactaccatatcttttagaaagaataatcgaaaaaatattatccaatgagcaaattacttatatccttggactcgtgaattgacgaatt  8816900                                                                   ----------->RAV1(2)                                                                  --------->ARR14(2)                                                               <---------ANAC58                                                               <---------ANAC58                                                              --------------->AtSPL3                                                              <---------TOE2(3)                                                              --------------->AtSPL8                                                              <---------TOE1(3)                                                             --------->MYB52(1)                                                             <-----------GT1     --------->At4g35610                                     <---------DOF5.7(2)   <---------GLK1(2)                                  ----------->GT1 ------>MYB46(1)  --------->ZAT2                          <---------LBD16  <---------MYB52(2)              ----------  <---------ZAT2            --------->ANAC58       --------->MYB52(1) ------>MYB83     -------------- --------GT1                --------->ANAC58      --------->ICU4  ------->TEIL         <---------ANAC58 ---->WRKY38(1)     <---------ALFIN1------>ZmHOX2a(1) --------->YAB1<---------MYB111(1)<---------ANAC58   gaccagcttctgcataaattccacacacatacgctctcctaatatcagggacataatggtaattaacgtacctgcccatctgtcattttccttgttctct  8817000                              <---------AHL20(2)                         --------->AHL20(1)                         <---------AHL20(1)                         --------->AHL20(2)                         <---------AHL20(2)                        --------->AHL20(2)                        <---------AHL20(2)                    --------->AHL20(2)                                              --------->ARR11(3)                    <---------AHL20(2)                                              <---------ARR11(3)                    --------->AHL20(1)                       <---------LBD16--------->ANAC58    --------->TOE2(3)<---------AHL20(2)                  <---------MYB52(1) --------->ANAC58      --- >ID1<----------DOF2<---------AHL20(1)                  <-------GAMYB     ---------->DOF2       <---- ------->WRI1      --------->AHL20(2)            --------->YAB1       ---------->DOF2     <---------TOE2(3)   tcaaaaccttttttttggaaaattaattttatttttttgtaaacagttctataatgtctgttattcggaatccaaagaaagccagagatattgagattta  8817100                                            <---------AHL20(2)                                            --------->AHL20(2)                                           --------->AHL20(1)                                           <---------AHL20(1)                                           <---------AHL20(2)                                           --------->AHL20(2)                                        <---------AHL20(2)                                        --------->AHL20(2)                                       --------->AHL20(2)                                       <---------AHL20(2)                                      <---------YAB1                                    <---------ICU4                                              -----                                    --------->YAB1                                              -----                                    --------->AHL20(2)                                          <----                                    <--------HAHB4                                       <---------ANAC46     <---------ARR11(3)             -------->ATHB1                                       <---------ANAC58     --------->GLK1(2)              --------->ATHB51                                     <---------ANAC58     --------->ARR11(3)            <---------ATHB51 ------>ZmHOX2a(1)                  <---------ANAC46     <---------ARR14(2)            --------->ICU4  <---------------AGL15               *TSS     <----     --------->ARR14(2)        ------------>CBF    --------------->AGL15 --------->TOE1(3)      ----- -------->GT1                 <------ZmHOX2a(1) <-----------GT1<---------YAB1     <---------ANAC46 -----At5g28300<------ZmHOX2a(1)   <---------YAB1<-----------GT1         --------->TOE2(3)  <--------   cagtgaaaatctacagaggaagagatagcgaaggacaattattaatttattttcctattttagttttcattacaaccttaatcttcgtgttgtgtgttct  8817200          <---------RVE1(1)         <---------ARR11(3)         <---------GLK1(2)                                          <---------At4g35610         <---------ARR14(2)<---------ANAC58       <---------DAG2    --------->ZAT14         --------->ARR14(2)<---------ANAC58       <----------DOF2   --------->At4g35610 ---->ANAC55(2)           --------->ZAT2         <---------DAG2  ------>ZmHOX2a(1) ------>GT1 <---------AHL20(2)               ---------->ID1      <---------At4g35610 -----ANAC55(2)        <----------DOF2    <----------DOF2   <----------DOF2                         - -----HSFB2a(2)    ---------->ID1    <---------MYB52(1)  <-----------GT1                            < ---->HSFB2a(2)   <-----------GT1  --------->MYB52(2)   ---------->ID1                         ------ -ZAT14<---------TOE1(2)  <---------ZAT2 <---------DAG2<-----------GT1                        -------   gtaacttcccagattttttttttctctttgctgggcttcgttgccttttcccctttttttctctttcctctgctctcgattcagtttagggcgagaaaaa  8817300                                          <---------ANAC58                               ------>ZmHOX2a(1)                             <---------HSFB2a(1)                                                    <                             --------->HSFC1(2)                                                     <                             ------>ZmHOX2a(2)                                                      -                             <---------HSFC1(2)                                                     -                             --------->HSFB2a(1)                                                    -                            <------ZmHOX2a(2)                                                       <                           <---------GLK1(2)       --------->ANAC58                                 <                           --------->ARR14(2)      --------->ANAC46                                <-                           --------->ARR11(3)   --------->ZAT2                                <------        <-----------GT1    <---------ARR11(3)   <---------At4g35610                           ------- -------->At4g35610        <---------ARR14(2)---------->DOF2                                  ------- ---------At4g35610      ----------->ARR10<---------ANAC58                            <---------At4g35610 --->DAG2              ---------->DOF2  <-----------GT1                    --------->ATHB12   <------ --->DOF2           --------->YAB1 <----------DOF2 --------->ANAC58<---------GLK1(1)  --------->At4g35610   gtagctgtttttacagggtttatcacaaagatccttccttttttacttgaagctcgccattttcttagggtttctcttgatttcattcatctccagtgcc  8817400  ------>ZmHOX2a(2) --------->GLK1(1) <---------GLK1(1) <------ZmHOX2a(2) ---------ARR11(3) ---------ARR14(2) -------->ARR14(2) -------->AGP1                                                                     <---------ARR14(2) -------->ARR11(3)                                                                 <---------AGP1 -----------ARR10                                                                  --------->ARR11(3) ---------AGP1                     <---------ALFIN1                                <---------ARR11(3) --------CCA1(2)               <---------At4g35610                                 --------->ARR14(2) ---ZAT14                      --------->At4g35610                                <---------CCA1(2) -->ZAT14        <---------At4g35610            ------>ZmHOX2a(1)     ---------->ID1 ------>ZmHOX2a(2) -->ZAT18        ----------->RAV1(2)         ------>ZmHOX2a(1)      <-----------RAV1(1)      <------- ---ZAT18        --------->At4g35610------>ZmHOX2a(1)        <-----------GT1   <---------LBD16   ----   cagatctctctctctactcatctgccatttgtaagctcctcttcttcctcctctctccaaagtttacattttgttgttttctctggatcttcttaagcta  8817500                                                                              <---------TOE2(3)                                                                              <---------TOE1(3)                                                                         --------->YAB1                                                                         <---------ICU4                                                                         --------->ATHB12                                                       --------->AtLEC2  <--------ATHB1                                         <---------TOE2(3)              <---------YAB1        <---------YAB1               ------->TEIL   <---------REM1(2)   --------->ICU4          ----- --At4g35610                      <---------YAB1  --------->ETT(2)      <---------ATHB12       ------ ----->GLK1(2)           <---------ARR14(2)  <----------DOF2  <---------DEAR3(1)    <---------YAB1   atctttgattctgtttatgagattgtgtttccgattatgaatttaggctttgtctacatgcagggctgtgttcaatgattagggttttgatttagaacca  8817600                                                                                         <---------TOE2(3)                                           ----------->GT1                       <---------ARR11(3)         <----------DOF2           <---------ANAC46                       <---------ANAC46 <----------DOF2              <---------MYB46(3)                        <-----------RAV1(1) <-------- ----->DOF2<-----------GT1  <---------ANAC58      --------->DAG2     <----------DOF2     <---------TOE1(3) --->AtMYB61                <---------ANAC58     ---------->DOF2 ---------->ID1----------->GT1   aagcttttgggttttactggtttagtttaggcttgttgcgaagtagagaaaaaaagggaagggttttggcccttttgtggggagataatttagggtttct  8817700  Previous    Next  AGI:  At4g15410.1    Description:  UBX domain-containing protein. Identical to UBA and UBX domain-containing protein At4g15410 [Arabidopsis Thaliana] (GB:Q7Y175;GB:O23394;GB:Q94A11); similar to PUX4 (LANT UBX DOMAIN-CONTAINING PROTEIN 4) [Arabidopsis thaliana] (TAIR:AT4G04210.1); similar to unknown [Populus trichocarpa] (GB:ABK93225.1); contains InterPro domain UBX (InterPro:IPR001012); contains InterPro domain SEP (InterPro:IPR012989); contains InterPro domain UBA-like (InterPro:IPR009060) Range:  from: 8814801    to: 8816805    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g15415.1    Description:  ATB' GAMMA; poly(U) binding / protein phosphatase type 2A regulator. Identical to Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform (B'GAMMA) [Arabidopsis Thaliana] (GB:Q8RW96;GB:O04377;GB:O23394); similar to serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative [Arabidopsis thaliana] (TAIR:AT3G26020.2); similar to serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative [Arabidopsis thaliana] (TAIR:AT3G21650.1); similar to serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative [Arabidopsis thaliana] (TAIR:AT3G26020.1); similar to unnamed Range:  from: 8817187    to: 8819693    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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