Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------------AtSPL8                                                                            <---------------AtSPL3                                                                       --------->HSFB2a(2)                                                                       <---------HSFB2a(2)                                                                --------->YAB1                                         --------->AHL20(2)     <--------HAHB4               <-------                              --------->ANAC58                  <---------ICU4         <---------ARR14(2)                              --------->ANAC58                 --------->ICU4      --------->At5g28300                              --------->ANAC55(1)              <---------YAB1     ----------->GT1 <--                              --------->ANAC46              --------->MYB46(3)  <-------TEIL -------- -------ARR11(3)            <---------ALFIN1     <---------ALFIN1 <---------YAB1<---------ZAT14  ----   tatccaacttagtaaacacattgttcagaaacacgccaaaaaaaaaaatcaacacatctcaaaccatcattatccagaagggtacagtaaatccagttcc  8814400                                                                                                  ---                                                                                                  <--                                                                   --------->ARR14(2)          ------ --ARR14(2)                                <----------DOF2         --------->GLK1(2)         <------- -------TOE1(2)                            <---------DAG2  <-----------HVH21 ------->MYC3  <---------MYB46(3) ->ARR14(2)                            <-------TEIL --------->ANAC46         <-------MYC3 <---------ATHB12 -->ZmHOX2a(1)                <----------DOF2   <-----------GT1   <---------GLK1(2)       --------->ICU4   tagttttcgatttctaacttcaaaaatgctctctttctacatacacttttttacaagtctctatcacagaatcggaacatgtggatagagcaatggttag  8814500                        <---------TOE2(3)                      ----------->HVH21                  <---------DAG2                          --------->YAB1            ------>NtERF2<---------ANAC58              --------->WOX13(1)           --------->LBD16 <---------ARR14(2)        <---------YAB1           <---------ETT(1)--------->ARR14(2)      -------->HAHB4           ----------->HVH21                      --------->ICU4                         ----------->RAV1(1)           --------->DEAR3(1)                     <---------ATHB12                      --------->MYB46(3)          --------->LBD16<---------ANAC58       ------>MYB83                            --------->REM1(1) ------>ZAT14  <---------ALFIN1------>ZmHOX2a(1)------>MYB46(1)                       ----------->RAV1(1) -------ZAT18  --------->AtMYB61              <---------MYB59  --------->ANAC46    --------->ANAC58 --->MYB52(2) --------->MYB46(3)            ------->TEIL <---------ATHB12          --------->ANAC58 -P <----------DOF2 <----------DOF2 ---------->DOF2--------->YAB1               ---------->DOF2   tagactcttttccccgaccactctttgacgttcctcgataaatccgaacctaatgatcaatgaacacgacgagtcatttatacaaaggcaacaacaaaat  8814600                    <---------ANAC58                    --------------------->WRI1                    <---------ANAC46                                      --------->ANAC58                    <---------ANAC58                                      --------->ANAC58                <---------ANAC58                                  ---------->DOF2                <---------ANAC58              ---------->DOF2----------->GT1  <----------DOF2            <---------MYB52(1)  <---------At4g35610  <----------DOF2 <----------ID1--------->PCF2   <   gtggtttcttctcagtttgcttccttgaaaatttagctgttatatactaaaaggccttttgtaaggctaaaaggccaagcctttgggcccattaacatca  8814700                                                               <---------AHL20(2)                                                           --------->AHL20(2)                                                          --------->AHL20(1)                                                          --------->ARR11(3)                                                     ----------->GT1 --------->AHL20(2)                                                    ----------->GT1  ----------->TBP<---------YAB1                                                  ---------->DOF2  <---------------AGL15----------->GT1                                            --------->At5g28300<-----------GT1     --------->AHL20(2)              ------->TEIL                 ----------->GT1<---------ARR11(3)       <---------AHL20(2)              <---------TOE2(2)           <---------DEAR3(1)<---------ICU4----------->GT1      ------ ---------MYB52(1)                     ----------->HVH21  <---------AHL20(1)      --------->AHL20(2)   ccgtttattcgaaacgtatgttgttaagacttgagagaagtttgacggtgaaaaaaggaaaatatttacatatatatagtaaaattaaaatagtagaaag  8814800                                                                       <---------ANAC46                                                       <---------HSFC1(1)                 ---------->DOF2                       <---------HSFB2a(2)               --------->ANAC58                        --------->HSFC1(1)                           =               --------->ANAC58                        --------->HSFB2a(2)   <XXXXXXXXXXXXXXXXXXXXMIR837-5P            --------->TOE1(2)                     --------->HSFC1(2)  <------NtERF2                 -          ------------------------>ANAC81         --------->HSFB2a(1) --------->ATERF1(1)<---------YAB1          --------->ANAC58                        <---------HSFC1(2)--------->ETT(2)  --------->ARR14(2)        ---------->DOF2                    ------->GAMYB            <---------DEAR3(1)<---------ARR14(2) *TSS--------->YAB1----------->GT1      ----------->RAV1(1)      <---------DEAR3(1)   --------->GLK1(2) ----->GT1--------->ANAC58       --------->GLK1(2)<---------HSFB2a(1)------>NtERF2   <---------GLK1(2)   aaaaaaatcagaaagctacgaaagaaaaaaaaaacaatctagcaacagaagaagcttcgagaagacgatggcgacggagacgaacgagaatctgataaac  8814900                                                                                      <----------DOF2                                                        <---------ALFIN1     <---------ANAC58          <------ZmHOX2a(2)                      ---------->DOF2             <---------ANAC58         --------->ARR11(3)                   ------>ZmHOX2a(1)            ------>NtERF2         <---------ARR11(3)                   --------->HSFB2a(2)        --------->ATERF1(1)     <--- ================HOX2a_HOX2a                  <---------HSFB2a(2)       --------->At4g35610     <---- ----->ZmHOX2a(1)                             --------->LBD16          --------->ANAC46    ------>ZmHOX2a(1)   tccttcatcgagatcacttcttcatcaagagaagaagctaatttcttcctcgaaagtcacacttggaatctagacgctgccgtttcaactttcctcgata  8815000                 <---------SPL7                --------->DEAR3(1)               <------NtERF2              --------->At4g35610              <---------ATERF1(1)              ------>NtERF2             --------->DEAR3(1)             <---------ATERF1(2)             --------->RAP2.3(2)             ------->GAMYB             --------->RAP2.3(3)             --------->ATERF1(2)             --------->RAP2.6(2)            --------->RRTF1(1)            --------->MYB46(3)            --------->RAP2.6(1)            --------->ATERF1(1)            --------->RAP2.3(1)            --------->DEAR3(2)            --------->ERF1           <---------At4g35610           <---------ATERF1(1)           <---------ZAT2           --------->At4g35610           ------>NtERF2           --------->ZAT2          --------->DEAR3(1)         --------->ERF1         <------NtERF2         --------->RAP2.3(1)         <-----------RAV1(2)         --------->ATERF1(1)        <------NtERF2        ------>NtERF2        <---------ATERF1(1)        --------->ABI4(1)        <---------At4g35610        --------->LBD16        --------->At4g35610       --------->RAP2.3(2)       --------->DEAR3(1)       --------->RRTF1(2)      --------->RAP2.3(1)      --------->RAP2.6(1)                 <---------ALFIN1      --------->ATERF1(1)                 --------->AtMYB61      <------NtERF2  --------->AtMYB61    --------->DEAR3(1)      --------->RRTF1(1)               --------->AtMYB61         <---------ZAT14     ------>NtERF2  --------->MYB46(3) <---------ALFIN1          <---------ZAT18     <---------ATERF1(1)         <---------PCF5                  --------->ZAT18     <---------RAP2.3(1)        <-----------TCP11(1)             --------->ZAT14    --------->DEAR3(1)          --------->LBD16                <-------PIF5    --------->ATERF1(2)      -------->P--------->DEAR3(1)      ------->PIF5    <---------ATERF1(2)      ------>MYB46(1)                  <---------DEAR3(2)   --------->ATERF1(1)       --------->MYB52(1)               --------->LBD16   --------->RAP2.3(1) ------>MYB83  ------>NtERF2           <---------DREB2C(2)   <---------RAP2.6(2) ------>MYB46(1)--------->MYB46(3)     --------->ATERF1(2)  <---------ATERF1(1)<---------MYB59 <---------ATERF1(1)     <---------ATERF1(2)  ------>NtERF2--------->ATERF1(1)------>NtERF2              <---------DEAR3(1) ------TOE2(3)--------->LBD16------>MYB83--------->MYB46(3) <---------LBD16                         - -----DOF5.7(2)--------->RAP2.3(1)<---------ATERF1(1)       <---------ANAC46------>ZmHOX2a(1) -------   acgatgccgccgcagccgccgaaccaaaccctaccgggccaccaccaccttcttctactattgccggtgcacaatctccttctcaatctcactctcccga  8815100                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                       <---------ARR11(3)                                       --------->ARR11(3)                                       --------->ARR14(2)                                     -------                                       <---------ARR14(2)                                     <------                                   --------->YAB1                      --------->SPL7        --------                                  <------ZmHOX2a(2)                   --------->STY1(1)     <------NtERF2                               --------->LBD16                       <---------SPL7        <---------DEAR4(2)                              <---------HSFB2a(2)               <---------ZAT2             <---------ORA47(2)                              --------->HSFB2a(2)               --------->At4g35610       --------->ALFIN1                           =====================HOX2a_HOX2a     <---------At4g35610       <---------DREB2C(2)  --------->ANAC46         ====================HOX2a_HOX2a      --------->ZAT2            <---------DEAR3(1) -------->ZAT6             ------>ZmHOX2a(1) <----------DOF2   <---------ATERF1(1)       <---------ABI4(1) -->LBD16                  ==============HOX2a_HOX2a         <---------At4g35610  <------ZmHOX2a(2)   ttacactccgtctgaaacctctccctctccttcccgatcacgatctgcttctccgtcttctcgcgctgctccctacggtctccgatcgagaggcggtgct  8815200                                                                    --------------->AtSPL3                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)                                                                 --------->HSFB2a(1)                                                                 <---------HSFB2a(1)                                         <---------HSFB2a(2)     --------->KAN4(1)                              --------->ARR14(2)                 --------->GLK1(1)                              <---------ARR14(2)                 <----------TaMYB80                <-                              --------->GLK1(1)                  <---------GLK1(1)                ---                              <---------GLK1(1)         --------->ANAC46        --------->DEAR3(1)---                           <------NtERF2 --------->HSFB2a(2)     <---------KAN4(1)              <----                          --------->HSFB2a(2)           --------->ANAC58  --------->KAN4(2) <--------                          <---------HSFB2a(2)           --------->ANAC58<-------TEIL------>ZmHOX2a(2)                        <---------MYB52(1)  <------ZmHOX2a(1)   ---------->TaMYB80 <------ZmHOX2a(2)      ---------->DOF2  <-----------HVH21 <---------HSFC1(1)     <---------KAN4(2) <---------ARR14(2) -->ZAT2           --------->ARR14(2)    --------->HSFC1(1)     ----------->ARR10 --------->ARR14(2) ---ZAT2           --------->GLK1(2)     >>>>>>>ZML2 <---------REM1(2)  --------->SPL7  ------->TEIL ->ALFIN1          <---------ARR14(2)--------->GLK1(1)<---------ALFIN1--------->LBD16----------->HVH21   ggagagaataaagaaactgagaatccgtcgggaattcggagttctaggagtcgtcaacacgctgggaatatccgtacattcgccgatctgaaccgttctc  8815300  Previous    Next  AGI:  At4g15410.1    Description:  UBX domain-containing protein. Identical to UBA and UBX domain-containing protein At4g15410 [Arabidopsis Thaliana] (GB:Q7Y175;GB:O23394;GB:Q94A11); similar to PUX4 (LANT UBX DOMAIN-CONTAINING PROTEIN 4) [Arabidopsis thaliana] (TAIR:AT4G04210.1); similar to unknown [Populus trichocarpa] (GB:ABK93225.1); contains InterPro domain UBX (InterPro:IPR001012); contains InterPro domain SEP (InterPro:IPR012989); contains InterPro domain UBA-like (InterPro:IPR009060) Range:  from: 8814801    to: 8816805    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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