Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ------>ZmHOX2a(2)                                                                   ------>NtERF2  ------>ZmHOX2a(1)                                                                       <---------- ---------->RAV1(2)                                                  --------->At4g35610 ----------->HVH21 -------ALFIN1                                            --------->ARR14(2)         --------->GLK1(1) -----ALFIN1                               <-----------HVH21      <---------ZAT2   <------ZmHOX2a(1) ->ANAC58                                 ------->GAMYB   <---------ARR14(2)   <------NtERF2 ->DEAR3(1)                              --------->MYB46(3)--------->GLK1(2) <---------LBD16 ->RAP2.6(2)                          --------->MYB46(3)----------->ARR10    --------->ETT(1) ->ANAC46             ----------->HVH21--------->MYB52(1) <---------GLK1(2)  <---------ANAC46 ->ANAC58         ---------->DOF2--------->ANAC58  <------NtERF2  <---------At4g35610<---------GLK1(1) ----AtMYB77  --------->LBD16    --------->ANAC46  <---------At4g35610     <-----------HVH21 >MYB46(3)--------->ARR14(2)     --------->ANAC58  --------->At4g35610    <---------ZAT6 <---------ETT(1) >DEAR3(2)<---------ARR14(2)   --------->ZAT6     <---------DEAR3(1) <---------At4g35610 --------->ANAC46   actcctgatccagacccgaagaaagtgaccttgacactcaacaacggccaggccgctggagattctccagcagctagtgtcgggaggaatcccgacaggg  8813100                                            <---------ANAC58                                            <---------ANAC46                                           --------->ABI4(2)                                           <-------TEIL                                           <---------MYB46(3)                                        <---------DEAR3(2)                                       ------>ZmHOX2a(2)                                       <---------DEAR3(1)                                       ===================================HOX2a_HOX2a                                     --------->ARR14(2)                     ---------->DOF2                                     <---------ARR14(2)            ------>ZmHOX2a(1)                           <------ZmHOX2a(1)<---------ANAC58    ------>NtERF2                     <---------GLK1(1)====================================HOX2a_HOX2a                     --------->GLK1(1)<------ZmHOX2a(2)       --------->ATERF1(1)                   <------ZmHOX2a(1)<---------GLK1(1)        <---------RAP2.3(1)                 <---------TOE2(3)  --------->GLK1(1)        <---------ATERF1(1)        <---------TOE2(3)  ===================HOX2a_HOX2a   <---------RAP2.3(3)  ----------->HVH21    --------->ZAT14==========================HOX2a_HOX2a    <---------DEAR3(1) --------->At4g35610    <---------ZAT14===========================HOX2a_HOX2a   <---------RAP2.3(2)<---------At4g35610   <---------ZAT6<---------TOE1(3)<------ZmHOX2a(1)<---------DEAR3(1)  ---------->ID1  ---------->DOF2 -HVH21 <---------TOE1(3)  ==================HOX2a_HOX2a   --------->RAP2.6(3) <---------ZAT2   agtcagtgttgaggtttctaaggaaatcaggaagaaggagatcggtgcgtgcctcggtgaagacggctccttcgtcgttacagctgatggaaaggccttc  8813200                                                                             <---------ARR14(2)                                                                            =======================HOX2a_HOX2a                                                                            ======================HOX2a_HOX2a                                                                            <------ZmHOX2a(1)                                                                     --------->TOE1(2)                                                                     --------->TOE2(2)                                                             --------->HSFB2a(2)                                                             <---------HSFB2a(2)           <------ZmHOX2a(2)                                                             --------->LBD16=========================                       <-----------HVH21              <---------ARR14(2)    =========================                      <---------ANAC58                --------->ARR14(2) --------->HSFB2a(2)       <---------At4g35610          ----------->HVH21 <---------ARR11(3) --------->LBD16  <---------ARR11(3)       --------->ZAT2 <---------ANAC46                <---------GLK1(2)  <---------HSFB2a(2)------>ZmHOX2a(2)       <---------ZAT2 <---------ANAC58                --------->ARR11(3)<---------TOE1(1) --------->ARR11(3)   tattcgtccagctagtggatagaagcgtgagagagtctcggacagagagagtttcagattttccgagaaaacctccgaggactcggtgatgagatcgtag  8813300                <---------TOE2(2)             --------->ANAC58             <---------O2             --------->ANAC58             <---------ANAC55(2)          <---------REM1(2)        ----------->HVH21        --------->ETT(2)        <---------ETT(2)     ===========================HOX2a_HOX2a     ------>ZmHOX2a(2)    ============================HOX2a_HOX2a    <------ZmHOX2a(2)   <---------ARR14(3)               <------ZmHOX2a(2)   --------->ARR11(3)              --------->ARR11(3)   <---------ARR11(3)    <------ZmHOX2a(1)         ----------->HVH21   --------->ARR14(3)    ==================HOX2a_HOX2a                    <---------REM1(1)   --------->ARR14(2) <---------HSFB2a(2)        <---------ZAT2        <---------AtMYB61   <---------ARR14(2) --------->HSFB2a(2)        --------->At4g35610--------->ALFIN1                - ==========HOX2a_HOX2a<---------LBD16            <---------At4g35610----------->HVH21              <- ===========HOX2a_HOX2a--------->LBD16 <---------TOE2(3)    <------ZmHOX2a(2)                  <-----   aagaagatcgtcgacacgtagattccaggacaatagagatcaaggatagagagctgaaggcgatcacgaggtgatggtgaagcaggtttgatcacttctt  8813400                                               ----------->GT1                                           --------->MYB52(1)                                          <---------WRKY12    <---------WRKY38(1)                   <---------WRKY38(1)  <-----------HVH21                       <---------WRKY45 --------->ANAC46                    ---------->DOF2 --------->LBD16                 <----------DOF2                              *TSS    <------ZmHOX2a(1) -------->LBD16                 --------------->AGL15                 <------ZmHOX2a(1) --------LBD16                  <---------------AGL15               <---------TOE2(3) =============== -----DOF2                      --------->TOE2(3)               <XXXXXXXXXXXXXXXXXXXXMIR781        <-   tcccggtcacctctagcttcgcttccatcgtcttcctttaaaagtcaacgggttacaagattgaagtattgaggaaactttgacaagaggagaagatgga  8813500                                     <-------GAMYB                                    <---------MYB46(3)                                    --------->MYB55(2)                          --------->ZAT6  <----                                    --------->MYB52(2)                          --------->ANAC46-----                                    --------->MYB111(2)                      --------->ZAT18   <-----                        ------>ZmHOX2a(1)                                    ----------------->AGL1 <                        <----------DOF2                                      <---------ZAT18   ------          =====================HOX2a_HOX2a                                   <-----------------AGL1 -          <------ZmHOX2a(2)         --------->MYB111(1)                  <-------MYC3          ------ ================HOX2a_HOX2a      <---------MYB52(1)                     ------->MYC3          <----- ---------ID1        ---------->ID1<--------P                     ------>ZmHOX2a(1)   <------ZmHOX2a(1)   agagacaaatggatcagagatgtgtccttttaaactggtagttgaatcgttgatacaagtttcaactcctatccatgtgtccacactaggaacaaaattt  8813600            ---------->DOF2       --------->AHL20(2)   <---------TOE2(3) -----AHL20(2) ---->AHL20(2)                     --------->AHL20(2) ----AHL20(2)                      <---------AHL20(2) ---------AHL20(2)                --------->AHL20(2)     <---------AHL20(2) --->AHL20(2)                  <---------AHL20(2)        --------->AHL20(2) -------->AHL20(2)         --------->ICU4            <---------AHL20(2) --->AHL20(1)      <---------At4g35610            ----------->GT1         ----------->GT1           - ----AHL20(1)      --------->At4g35610      --------->YAB1<---------AHL20(2)  --------->AHL20(2) ----   aatttaagaaaaaataaagtctgctaacaatgtttatttaattcattcatattagtaaattaaataaaacttcaaatgcttaaaatagacgactatgtaa  8813700                  --------->AHL20(1)                  <---------AHL20(2)                                <---------AHL20(2)                  <---------AHL20(1)                                --------->AHL20(2)            --------->YAB1                                         --------->AHL20(2)    <---------WOX13(1)                                          --------->ATHB12 <---------AHL20(2)<---------YAB1                             <---------WOX13(1) --------->AHL20(2)<---------AHL20(2)               --------->AHL20(1) -------->AHL20(2)--------->AHL20(2)                --------->ARR11(3)        --------->AHL20(2) ----->ICU4 ----------->GT1  <---------------------WRI1    <---------YAB1     <---------AHL20(2)   <-   tatttaattggtgatagtaatataattcgacttctaaacaaacaaaaaaaaacatatattgaagattgatttaattgtatttaaaattttagagagcgtt  8813800                   --------->AHL20(2)                  --------->AHL20(2)          ----------->GT1                  <---------AHL20(2)     --------->AHL20(2)          ----------->GT1                  <---------ATHB51       <---------AHL20(2)        ---------->DOF2            ----------->GT1   --------->ARR11(3)         --------->AHL20(2)          --------->DAG2      --------->AHL20(1)        --------->AHL20(2)                  ---------        ---------->DOF2       <---------AHL20(1)    --------->AHL20(2)                <---------YAB1      <---------YAB1 --------->ICU4    <---------------AGL15    --------->YAB1  <---------TOE2(3)    --------->YAB1--------->ICU4  ----------->GT1   --------->AHL20(1)         <-----------GT1   ---- --------YAB1----------->GT1 --------->AHL20(2)     <---------AHL20(2) --------->AHL20(2) ---------->DOF2   tatgaattataaaaggggaaataattttgaaatatatagttatatatatagaaataaaataaaaaatcagaaagaaaatataaacgttatgagaaagaaa  8813900                            ----------->GT1                   --------->ARR14(2)                   <---------ARR14(2)                  <----------TaMYB80                 ---------->TaMYB80        --------->YAB1   ------>MYB46(1)                 ---------->DOF2       <---------ATHB12  ------>MYB83               <---------MYB46(3) -->GT1<---------YAB1    -------->P                 ----------->GT1     <---------ARR14(2) ------>DOF2    <---------ANAC46             <------ZmHOX2a(1)          --------->ARR14(2)       <---   aaagagcaaatgatagtggcatataccaactggtaaaacttctaagaggattgtttgttaaaagtctcacatcgaatatgagactgagccctagtccaaa  8814000  Previous    Next  AGI:  At4g15400.1    Description:  transferase family protein. similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT5G47980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69388.1); contains InterPro domain Transferase (InterPro:IPR003480) Range:  from: 8811928    to: 8813478    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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