Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                <---------AHL20(2)                                                                                --------->AHL20(2)                                                                               --------->AHL20(2)                                                                             --------->TOE2(3)                                                                            <--------HAHB4                                                                           <---------YAB1                                                      --------->ATHB12     <------ZmHOX2a(2)                          --------->DAG2              --------->ATHB51    --------->ARR11(3)                         ---------->DOF2             <---------AHL20(2)   <---------ARR11(3)                      --------->ANAC58               <---------YAB1      <------ZmHOX2a(1)                      ----------->GT1        --------->ATHB12===================HOX2a_HOX2a          ----------------->AGL1---------->DOF2  --------->YAB1       --------->YAB1      <---------ICU4  --------->ANAC58    --------->ANAC46   <------ZmHOX2a(2) <---------AHL20(2)<--- -------->YAB1       <---------------------WRI1<---------WOX13(1)     <---------LBD16 <---------YAB1   aaacataatttttccaagacgagaacgtaaagttcaaagcatctaagtcattgatattattggatcaaattatcaggatcattaatttataaatgtgtta  8726300                                                                              --------------->AGL15                                                                             ----------------->AGL3                                                                     <---------At4g35610                                                                     --------->ZAT2                                                              --------->ARR14(2)         --------->At4g35610                           --------------->AtSPL8             <---------ARR11(3)         ----------->GT1                           <---------------AtSPL8             <---------ARR14(2)         --------->ANAC58                       ---------->DOF2                        --------->ARR11(3)         --------->ANAC58             <---------ANAC46             <---------ANAC55(1)<---------CCA1(2)<---------------AGL15           <---------ICU4  <---------------AtSPL3        <---------ANAC46    <-----------------AGL3          --------->ICU4--------->DAG2    <---------ANAC46  ----------->ARR10<-----------------AGL1       <---------AHL20(2)  --------------->AtSPL3        ----------->GT1 <------ZmHOX2a(1)    -------       --------->AHL20(2)  --------->ALFIN1       <---------AHL20(2) --------->At4g35610 <------MYB46(1) ------TOE2(3)  <-------TEIL      <----------DOF2 --------->AHL20(2) <---------ZAT2      <------MYB83   atgtattagttaattatgtgcatataaaagtggtacctttcattaagtgtatttatatagggtatatcttcagcaggactccattttaggcaggtaaaaa  8726400                                  --------->ANAC58                                  --------->ANAC58                       <-------TEIL                      --------->CCA1(2)                     <---------GLK1(2)                     --------->ARR14(2)                                   <---------ARR14(2)                     <---------ARR14(2)                        <----------DOF2          <------ZmHOX2a(1)           --------->YAB1       ---------->DOF2      ---------->ID1       --------->ARR14(2) -->ICU4  <---------ATHB12--------->ANAC46    --------->MYB52(1)         <------ZmHOX2a(1)   tcagccataccaatgagaaacaagattcacagaagaaagccaagagccaaacgttgtcgttttcgcttatatgtaggattcgatacaagaggagagaata  8726500                                                      =====================HOX2a_HOX2a                                                      ------>ZmHOX2a(2)                                                     ======================HOX2a_HOX2a                                                     <------ZmHOX2a(2)                         <---------At4g35610        --------->AGP1                    ------>ZmHOX2a(2)               --------->ARR11(3)                   --------->CCA1(2)                <---------ARR14(2)                  --------->ARR14(2)                --------->ARR14(2)                  <---------ARR11(3)                <---------ARR11(3)                  --------->ARR11(3)               --------->GLK1(1)                  <---------ARR14(2)          <---------ANAC46                  --------->AGP1              <---------ANAC58                          <---------At4g35610             --------->TOE1(2)                <---------ANAC58                         <---------ARR14(2)            --------->YAB1                  <---------ANAC46                           ------->TEIL          --------->GLK1(2)              <----------DOF2                    --------->At4g35610          <---------ARR14(2)            <---------ANAC58      ---------->DOF2    ------->TEIL         <---------GLK1(2)              <---------ANAC58------>ZmHOX2a(1)   --------->CCA1(2)      <------NtERF2<------ZmHOX2a(2)  ------->TEIL <---------GLK1(1)<------ZmHOX2a(1)  --------->ARR14(2)   gagaaggccgagaatcgtgagatctacagctcttaaaacgtagcttttgtgtgagatcctttcgcaaagaggatggagagatgaacttgaatctgccatt  8726600                                <-------TEIL                                ------->TEIL                            <---------------AtSPL8                          ----------->HVH21                            --------------->AtSPL8                   *TSS --------->At4g35610                            ------->TEIL                       --------->ANAC55(2)                            <---------------AtSPL3             <---------ANAC55(2)                         <---------YAB1                        --------->ANAC46             <--------                       --------->CCA1(2)                    <---------ARR14(2)            --------->CCA1(2)                --------->MYB55(2)                       <---------ANAC46 <---------At4g35610      --                <---------MYB46(3)  ------->TEIL       <---------ANAC46 <---------ZAT18  --------->ARR11(3)   <---------At4g35610<---------ARR14(2)            <---------MYB46(3)  --------->ZAT18  <---------ARR11(3)   --------->At4g35610--------->ARR14(2) <---------AHL20(2) --------->ARR14(2)  ---------->DOF2   ---   gaatcagctcttaatcggtgtttggatatgaatgtacgtatatataatgtgtagttgttgtgtatacgtactagtgggctgacaaagtatagatatatat  8726700                      --------->YAB1                                                            <----                      <---------ICU4                                                        ---------                <---------WOX13(1)                                                          <--------            <---------WOX13(1)                                                              <--------           <---------ANAC58                                                                 ---------           <---------ANAC58                                                    --------->DOF5.7(2)<--    --------->YAB1   --------->ICU4                               <---------WOX13(1)  ----------->GT1 ---TBP<------------CBF      <---------ANAC46                   --------->ATHB12  <---------TOE2(3) ---------->CBF<------------CBF   <-------TEIL                 <---------YAB1 <----------DOF2<------- ------>ANAC46--------->ATHB12 ----------->GT1    <-----------GT1<------------CBF<---------DOF5.7(2)   acacaatagtattgagtgattgaataatgagtcgggtacattttgactaattttacaaataatgtatgattgaaatagttctttaacgaagtaaaatatt  8726800                              <---------ARR14(2)                              <---------GLK1(2)                              <---------ARR11(3)                              --------->ARR14(2)                             <---------HSFC1(2)                             --------->HSFB2a(1)                     --------->GLK1(2)               <---------ANAC58         <---------YAB1      <---------HSFB2a(1)       --------->ANAC46<---------LBD16 -------GT1    <---------ANAC55(2) >AHL20(1)     <---------ANAC46                  <---------ICU4 -AHL20(1)     <---------ANAC58--------->GLK1(2) --------->ATHB12  <---------DAG2 -AHL20(2)--------->ATHB12   --------->HSFC1(2) <---------YAB1     --------->TOE1(3)      <---------TOE2(3) >AHL20(2)<---------ICU4<---------HSFB2a(2)   --------->ANAC46     --------->TOE2(3)<----------DOF2 -------YAB1   <---------ANAC55(1)     ------->TEIL              -------->P   <------ZmHOX2a(1)    <- --ICU4--------->REM1(1)--------->HSFB2a(2)   --------->REM1(1) <-----------GT1 <------ZmHOX2a(2) ---   actatttctacatcattgcgtataatctggaagattctatgaatctctacatcattgcaatggaacttaccttatcgaaaggatcactttctaatgtata  8726900                                <------NtERF2                               <---------DEAR3(2)                              <---------DEAR3(1)                              --------->ETT(1)                             --------->RAP2.6(3)                            <-----------HVH21                           <-----------RAV1(1)                           ----------->HVH21                         --------->ZAT2                      <---------ZAT2                      <---------At4g35610    <---------ANAC58  --------->At4g35610    <---------ANAC55(1)  --------->At4g35610    <---------ANAC46  --------->ZAT2    <---------ANAC58---------->CDC5    <---------ANAC55(2)  <---------ZAT2    --------->ANAC55(2)  <---------At4g35610   <---------LBD16  ===================RAV   ------->TEIL  <-----------GT1   <-----------RAV1(2)     <---------AtLEC2 --------ICU4    --------->bZIP60(1)       <-------TEIL                                  --------->AHL20(2) ------>ICU4     <---------bZIP60(1)      --------->AtLEC2                   <---------YAB1   agtattacgggtttcaatgacctcagcagctgtcggctagaaacatgcatgttatatgtacgatgggagggtttcgattttcatttatagattatatgca  8727000                                                       <---------AHL20(2)                                                       --------->YAB1                                                       --------->AHL20(2)             <---------RVE1(1)           --------->ARR11(3)            <---------ARR11(3)           <---------ARR11(3)            --------->ARR11(3)          --------->GLK1(1)                                           <     --------->AtMYB61             ----------->GT1  --------->YAB1                              ----- <----------ID1               ------->GAMYB     --------->ZAT6                            <----------ID1 --------->MYB46(3)      <------ZmHOX2a(2) --------->TOE2(3)  ------->TEIL     ----------->GT1-------   taaacgaccaaaacgatatttcagtggatcaacagcaaggtgaaatcttaagactaataatatgcatccaatctcttggttttgttaatttagcgacaaa  8727100             --------------->AGL15             <---------------AGL15            <---------YAB1           <---------AHL20(2)       -------->ATHB1       <--------HAHB4       --------->ATHB51       <---------AHL20(2)       --------->YAB1       <---------ICU4                                                                           <----       -------->HAHB4                                                                         <------MYB83      <---------YAB1                                                                         --------      <---------ATHB51                                                                       --------      --------->ICU4                                                                       <---------MYB52(1)    <---------ICU4                                                                        <-------GAMYB    -------->HAHB4                                                                        -----------    --------->YAB1                                          --------->ATHB51             --------->MYB111(2)    <--------ATHB1                                          <---------ICU4               <---------MYB46(3)    <--------HAHB4                                          --------->AHL20(2)           --------->MYB55(2)    --------->ATHB51                                       --------->ICU4               --------->ALFIN1   <---------ATHB51                                     --------->AHL20(1)           --------->DAG2   <---------YAB1                                       <---------AHL20(1)        >>>>>>>>>>GATA-1---   --------->AHL20(2)                                   <---------AHL20(2)        >>>>>>>>>>GATA-4---   --------->ICU4                                       --------->AHL20(2)        >>>>>>>>>>GATA-3--- --------->YAB1                                     --------->AHL20(2)           --------->YAB1 <---- ---------YAB1<---------AHL20(2)                  ----------->GT1  <---------MYB52(1)<---------TOE2(3) ------>GT1<---------AHL20(1)              <---------AHL20(2)   <---------AHL20(2)>>>>>>>>>>GATA-2--- --->DOF2<---------YAB1---------->DOF2    --------->AHL20(2)<---------AHL20(2)  <---------YAB1<------MYB46(1)   gtataataattattattttttttagtaaagaagagtaatggatttttaatagaagtaattaattatttagttagtcagacctatgataaggtggttaggt  8727200  Previous    Next  AGI:  At4g15290.1    Description:  ATCSLB05 (Cellulose synthase-like B5); transferase/ transferase, transferring glycosyl groups. similar to ATCSLB03 (Cellulose synthase-like B3), transferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G32530.1); similar to ATCSLB06 (Cellulose synthase-like B6), transferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G15320.1); similar to ATCSLB02 (Cellulose synthase-like B2), transferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT2G32620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24024.1); contains InterPro domain Cellulose synthas Range:  from: 8721487    to: 8726669    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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