Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <------ZmHOX2a(2)                                                                                          --------->CCA1(2)                <---------ARR11(3)                                                       <---------AGP1                <---------GLK1(2)                                                        --------->ARR14(2)              ----------->ARR10                                                          --------->AGP1            --------->CCA1(2)       <---------AHL20(2)                                   <---------ARR11(3)     --------->YAB1       ---------->DOF2                                                --------->ARR11(3)    <---------ATHB12    ----------->HVH21                                         --------->GLK1(2)   ------>MYB46(1)    <---------ANAC58                                  <---------HSFB2a(2)   ------>MYB83 --------->ARR11(3) --------->ICU4      ----------->GT1  --------->HSFB2a(2)------>ZmHOX2a(2)  --------->WOX13(1)  <---------ANAC46              --------->MYB52(1) <---------LBD16   <---------ARR14(2) ->ID1 ---------->DOF2<---------ANAC58      <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------CCA1(2)   aaaccaatcaaaagataagattttgggtgaaaggggaattaatactcagacagccaagggttaatcttcaacttctgggagaagaatcccagatctgaaa  8713300                  <xxxxxxxxxxxxxxxxsmallRNA(le3)                  <---------CCA1(2)                 <xxxxxxxxxxxxxxxxxsmallRNA(si3)                 <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                <xxxxxxxxxxxxxxxxxxsmallRNA(se3)               <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                   --         --------->ZAT14                     <---------ALFIN1                                    <---       --------->ANAC46                    <---------ALFIN1                                    ------       <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                        --------->TOE2(3)    <---------ZAT18               <-----------GT1    *TSS                               --------->TOE1(3)    --------->ZAT18  --------->YAB1-------->P--------->ANAC46               <----------DOF2   <------   ctctagtccacaatactcttgtatcatcaccatattcaaccccttccacatcccataaaactaagacatcacaaatctctttcacaaaaaccttaaatat  8713400                                                        <---------MYB111(2)                                                        <---------MYB59                                                        <---------MYB52(2)                                                        <---------MYB46(2)                                                        <---------MYB111(1)                                                       <---------ANAC55(2)                                                     <-----------GT1                                                 ---------->DOF2                                             --------->TOE1(3)    --------->WOX13(1)                                             --------->TOE2(3)  <---------YAB1                  <----                                            --------->ZAT6------>MYB46(1)                       <----                                          ------>MYB83 --------->ANAC55(2)               --------->GLK1(1) ---------->CBF        --------->ANAC58   ------>MYB46(1) --------->MYB52(1)             <---------GLK1(1) --------GT1           --------->ANAC58 --------->AtMYB61--------->MYB55(1)       ---------->DOF2---- --->ARR11(3)        --------->MYB52(1) <---------MYB59--------->At4g35610    ---------->DOF2  <----- ---ICU4         --------->ANAC46       <---------MYB46(2)------>MYB83     --------->AtLEC2   ------>ZmHOX2a(1)   caccaatttcaacatatatacacaaacgaaaatagtcacagacctaaccctaaaatcacctaacatatcattcagacatgaaaagaaagagagttcctat  8713500                                                                             <---------------AGL15                                                                          --------->ARR14(2)                                                                          <---------ARR11(3)                                                                         <---------CCA1(2)                                                                  --------->ATERF1(1)                                                                  <---------At4g35610                                                                  --------->At4g35610                                                                  <------NtERF2                                                                 ------>NtERF2                                                                 <---------RAP2.3(1)                                                                 <---------ATERF1(1)                                                                 <---------MYB46(3)                                                                 <---------DEAR3(2)                                                                 <---------ERF1                                                                <---------DEAR3(1)                                                               --------->ATERF1(1)                                                               <---------At4g35610                                                               <------NtERF2<-----------------AGL3                                                              <---------DEAR3(2)                                                              <---------RAP2.3(1)                                                              <---------ATERF1(1)                                                              <---------ORA47(2)                                                             <---------DREB2C(2)                                                             <---------WRKY12--------------->AGL15                                                             <---------MYB46(3)                    --                    --------->AHL20(2)         <---------TOE1(3)<---------RAP2.6(2)           -------          --------->ANAC46                     <---------TOE2(3)<---------RAP2.3(2)  <---------GLK1(2)          --------->ANAC58          --------->ZAT14          <---------DEAR3(1)    <---------TOE1(3) -----ATHB12        <---------YAB1  --------->ZAT2           <---------DEAR4(1)    --------->MYB59<-- -----YAB1--------->ANAC58          <---------At4g35610     <---------ORA47(1)     <---------TOE2(3) ----->ATHB12   --------->TOE1(3)   <---------ZAT2          --------->SPL7<---------ARR11(1)------>NtERF2 ----TOE1(2)    --------->TOE2(3)   --------->At4g35610    <-----------HVH21<-----------------AGL2<--   gatttgcattagacgaaaccttataaatacacagacacagcagacaattagggtttacttcggtcggcggctaccatatctattttaggttctcggccca  8713600                               ------->GAMYB                              <---------MYB111(2)                              <---------MYB55(2)                            ------>MYB83                            ------>MYB46(1)                            ----------->RAV1(1)                          <---------MYB59                                                  --------->DAG2                          --------->MYB46(3)                                              ---------->DOF2                      ----------->HVH21                                                  *TSS                    <---------ANAC58                                                    ------->GAMYB                    <---------ANAC46                                               <---------ATHB12                    --------->ANAC55(2)                                            --------->MYB46(3) <---------YAB1     <---------ANAC58                       <-----------GT1       --------->WOX13(1) <-----------GT1 <----------DOF2--------->ANAC46     <----------DOF2           ------------>CBF ------->YAB1  --------->At4g35610           --------->AHL20(2)               --------->ANAC58 ----->CBF     <---------At4g35610           <---------AHL20(2)               --------->ANAC58 -------ATHB12 <---------ZAT2 --------->MYB46(3)     <---------DAG2   <----------DOF2 <-------------- -------ATHB51 --------->ZAT2 <---------MYB52(2)  <-----------GT1     <---------DAG2 --------->MYB52(1)   attatactaaatgggccagctttcgtgacccaacaaacaacttacatttattttactttattaacacattcactttacaaacccaatcaacgaaaagtcc  8713700                                                                             ---------->DOF2                                                      <---------ARR14(2)  ------->GAMYB                                                      --------->GLK1(2)  <------------AtMYB77                                                      --------->ARR14(2)-------->P                                                   <------NtERF2        ------>MYB83                                                  --------->LBD16       ------>MYB46(1) --------->ANAC58                                                  ------>NtERF2        --------->MYB52(1)        ----   --------->TOE2(3)                             <---------LBD16    ------>NtERF2       --------->ANAC58  <---------ANAC55(2)                            --------->LBD16   --------->LBD16    ---------->DOF2  ----------->GT1                       <---------CCA1(2)          ------>NtERF2   --------->ANAC58 -------WRI1                 <---------At4g35610<---------LBD16  <---------LBD16   --------->ANAC58   aaaaacgtaaaaacagaaatgaagaagattgagctcgtgttcataccttcgccgggaatcggccatctccggccaaccgtgaagctagcaaagcaactca  8713800                                                                    --------->DEAR3(1)                                                           --------->ALFIN1                                   <---------ICU4        --------->LBD16                                  <---------YAB1        <---------DEAR3(1)                                <---------ICU4         <------NtERF2--------->RAP2.6(2)                                --------->YAB1        <---------RAP2.3(1)                               <---------ATHB12       ------>NtERF2 ------->GAMYB                               --------->ICU4        --------->DEAR3(1)                           --------->At5g28300       --------->ANAC46                        <---------At5g28300 --------->HSFC1(1)     --------->MYB46(3)                       --------->YAB1       --------->HSFB2a(2)    --------->DEAR3(2)                      <---------ATHB12      <---------HSFB2a(2)    <---------MYB55(2)                      --------->MYB46(3)    <---------HSFC1(1)     <------------AtMYB77 ----->At4g35610    --------->WOX13(1)<<<<<<<<<NAM   <---------DEAR3(1)   <---------CCA1(2)   <------   tcggaagcgaagaacattttttcaatcaccgtaatcatcatcccttctagaaacgacgccggtgatgcaaccgcctatatcgcatccctcgttgcagagt  8713900                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                      <---------ARR11(3)                                                      --------->ARR11(3)                                                      --------->GLK1(2)                                                      <---------ARR11(1)                                                     --------->GLK1(1)                                                     <---------CCA1(2)                                                 --------->ANAC58                                                 --------->RAP2.6(2)                                                 --------->ANAC58                                                 ------->GAMYB                                                --------->MYB46(3)                                               ------>MYB83                                               ------>MYB46(1)                                               -------->P                                              --------->MYB55(1)                                              --------->MYB52(1)                                             --------->AtMYB61                                             <---------MYB111(1)                   ------->TEIL              <---------MYB46(2)                <---------MYB52(2)           <---------MYB55(2)            <---------At4g35610              --------->MYB46(3)            --------->At4g35610              --------->DEAR3(1)         ------>NtERF2                       <---------MYB111(2)        --------->DEAR3(1)                   <---------ALFIN1     ------>ZmHOX2a(2)                    --------->AtMYB61                     --------->HSFB2a(2)    <------ZmHOX2a(2)                     ------->GAMYB         <---------RAP2.6(3)   --------->ARR11(3)                    <---------MYB55(2)    --------->DEAR3(1)   <---------ARR14(2)                    --------->MYB46(3)    --------->RAP2.3(2)   --------->ARR14(2)                   -------->P--------->LBD16           --------->REM1(1)    ----   <---------ARR11(3)                 --------->MYB46(3)     <---------At4g35610<---------HSFB2a(2) ---GLK1(2)--------->ANAC46  --------->LBD16--------->MYB46(3) --------->RAP2.3(3)               <---   ctcaagatcgcctccgctacgaacccatctccgtcgaaaaacaaccaccaaccgcaaatcttgagccgtctcaagtctacatcgagaaacaaaaaccaca  8714000                                                         <---------ZAT18                                                        <---------ANAC46                                                   <---------ANAC58                             <----                         --------->WOX13(1)        <---------ANAC58                        --------->MYB52(1)                       <---------YAB1           <---------GLK1(2)                          <---------DOF5.7(2)                      --------->TOE2(3)         --------->ARR14(2)                       <---------MYB52(2)                     --------->YAB1             <---------ARR14(2)                      <---------At4g35610                --------->LBD16               --------->LBD16                    ------>ZmHOX2a(2)         --------->DEAR3(1)                 <---------LBD16                   --------->ATHB12  ----- ----->TGA1a   <---------HSFB2a(2)--------->ANAC58 <---------ANAC46           --------->YAB1<-------- ------TGA1a   --------->HSFB2a(2)--------->ANAC58<-------TEIL               <---------ATHB12   -----   agtgagagacaccgtctccagaatcatcaatccaacaagaaaactcgccggattcgtggtggacatgttctgttcttcaatgatcgatatagctaacgaa  8714100                                                                                                 <---                                                                                               <-----                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------       <---------ANAC58                                                       ------>NtERF2 ---------       <---------ANAC46         --------->ANAC58                              ----------->RAV1(1)<---       <---------ANAC58         --------->ANAC46                         --------->SPL7   <---------TGA2(2)   <---------GLK1(1)            --------->ANAC58                     <---------------AtSPL8<---------   --------->GLK1(1)     --------->ANAC46                        --------->ANAC58   --------->DAG2 -----ARR14(2)         <---------ALFIN1                          --------->ANAC58  ---------->DOF2 -->TEIL            ------>ZmHOX2a(2)                            --------->ANAC46  ================== -TOE2(3)         --------->ARR11(3)                          <-------TEIL   <----------ID1---------- ---->ARR14(2)    <---------ARR11(3)                  --------->ANAC46 --------->TOE1(2) ----------->TGA1   tttggagttccttgttatatgatctacacatcaaacgctacgtttttgggaatcacacttcacgttcaagaaatgtacgacgacaaaaagtatgacgtca  8714200  Previous    Next  AGI:  At4g15258.1    Description:  SNOR37-2; snoRNA Range:  from: 8713226    to: 8713353    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g15260.1    Description:  UDP-glucoronosyl/UDP-glucosyl transferase family protein. similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT4G15280.1); similar to Anthocyanidin 3-O-glucosyltransferase (Flavonol 3-O-glucosyltransferase 6) (UDP-glucose flavonoid 3-O-glucosyltransferase 6) (GB:Q40288); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 8713689    to: 8715339    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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