Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->TGA2(2)          ----------->HVH21         <-----------HVH21         <-----------TGA1        =============================bZIP_DOF        --------->ANAC58        --------->ANAC46        --------->ANAC55(2)        --------->ANAC55(1)        <---------ANAC55(2)        --------->ANAC58        --------->O2        <---------O2        --------->TGA1a                                                                       -------        <---------TGA1a                                                                       -------        --------->bZIP60(2)  <---------HSFB2a(2)                           --------->GLK1(2)  -------       <-----------STF1      --------->HSFB2a(2)      ---------->DOF2   <---------TOE1(3)     -------      <---------ALFIN1    <----------DOF2         ---------->DOF2       <---------TOE2(3)    <------- ------ANAC55(2)          <---------DAG2         <------ZmHOX2a(1)  <----------DOF2        --------->MYB46(3)   cttaaacaacacgtcacctcttctatcacttttggaagattagattccataggaaagaaagaagaatagtctttaaggttctgagtttgtgtaaccacgg  8710700                                                                                                 ----                                                                                                 ====                                                                                                =====                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                          --------->YAB1                                       <-----                                       <---------GLK1(1)                                       <-----                                  <-----------RAV1(2)                                          <-----       ------->TEIL              --------->ZAT2                           <---------HSFB2a(1)  ------      <-----------GT1        ------>ZmHOX2a(1)                            --------->HSFB2a(1)  <----- -->ANAC58                   --------->LBD16                      ----------->HVH21           <------ -->ANAC58                   --------->HSFB2a(2)            ------>MYB83  --------->HSFC1(2)  <------ -->ANAC46                  <---------LBD16                 ------>MYB46(1)      <---------TOE2(3) -->ANAC55(1)              ----------->RAV1(2)            <---------MYB59 <---------HSFC1(2) -------- --LBD16         <---------ATHB12<---------ZAT2           --------->AtMYB61     ---------->DOF2------   aagttgatgaaccattccaatcgtctaattcctggagcagggtatcagaaaatggagagaccaaacttgtgacagaaggttctaaagttgaagaccagat  8710800     <---------GLK1(1)     --------->GLK1(1)   <---------RAP2.6(3) -->ZmHOX2a(2) ==========================HOX2a_HOX2a ==========================HOX2a_HOX2a --ZmHOX2a(2) ------ARR10 --->ARR14(3) --->ARR11(3) ----ARR14(3)                                                                           ----------->HVH21 ----AGP1                                                                             --------->At4g35610 ----ARR14(2)                                                                       <---------WRKY12 --->ARR14(2)                                                                      --------->PCF5 ----ARR11(3)                                                          ----------->GT1<---------At4g35610 ---CCA1(2)                     --------->MYB52(1)                   <---------ZAT14<---------ZAT14 ---ARR14(1)              --------->YAB1       --------->ZAT14       --------->ZAT14--------->ZAT14 --->ARR10             --------->WOX13(1)  --------->GLK1(2)         <---------ZAT18<---------WRKY38(1) --->AGP1           <------ZmHOX2a(1) <-------TEIL          ------>ZmHOX2a(1) --------->MYB52(1)   cttgccgaaatctgatggagaaggacaatcagagtaagggttcagactctgaagtctgtgtcctaaaccagtgcagttactagcggtccactgacatcct  8710900                                        <---------ANAC58                                        <-------GAMYB                                        <---------ANAC46                                        <---------ANAC58                                     <---------MYB52(1)                                     --------->ALFIN1                     <---------ANAC58                                    --------->LBD16                       <---------ANAC55(2)                                   --------->TGA1a                        <---------ANAC58                                   <---------O2 ===============================HOX2a_HOX2a                                   <---------TGA1a                        <---------ANAC46                                   <---------ANAC58                     =============================HOX2a_HOX2a                                   =============MYC_MYB                 ------>ZmHOX2a(2)                                   <---------bZIP60(2)   --------->HSFB2a(2)                    -----                            --------->ZAT14     ==============================HOX2a_HOX2a      <-----                            <---------ZAT18     <------ZmHOX2a(1)      <------ZmHOX2a(2)       ------                            --------->ZAT18   --------->ANAC58  --------->ZAT14                ------                            <---------ZAT14   --------->ANAC58  <---------ZAT14   <----------DOF2  --                <---------ANAC58   <---------ANAC58--------->HSFB2a(1) ==============================HOX2a_HOX2a ---------->DOF2<---------ANAC58   <---------ANAC46<---------HSFB2a(1)--------->ARR11(3)       <----- ============================================bZIP_DOF    <---------HSFB2a(2)--------->ALFIN1  <------ZmHOX2a(1)   tggcaaagagaaacattttcgttcatacagtgtactgccgtgggttgtaaggaacatttctcgcagagtagagatcgcgtgtgtctttgagacagaggat  8711000                <-----------TGA1           --------->DOF5.7(2)          --------->TOE2(3)      --------->ZAT14      <---------ZAT18      <---------ZAT14      --------->ZAT18    --------------->AtSPL8                                                     --------->LBD16   <---------ANAC46                              --------->CCA1(2)            <---------HSFB2a(2) ---->ARR14(1)  <-----------HVH21                --------->GLK1(1)         <---------TCP20 ----GLK1(2)   --------->bZIP60(1)              <---------ARR14(2)         --------->ARR14(2) --->ARR14(2)  --------->ANAC46                 <---------GLK1(2)          <---------ARR14(2) --->ARR11(1) <---------TOE2(3)                 --------->ARR14(2) <----------DOF2   <-----------HVH21 ------->At4g35610            ---------->DOF2 ----------->ARR10    <---------DAG2 ---------->DOF2 ----ARR14(2)<---------DOF5.7(2)             --------->YAB1    <---------TOE2(3)--------->ANAC46   tcgctgagtgtacattaacgtcacagtttaaacaaagtttagccgaatcagatttgcagtagattaatgctttttcggttccacaaaagtcacatcgagc  8711100                                                                                          ------>ZmHOX2a(2)                                                                                        --------->ARR11(3)                                                              <---------ALFIN1          --------->ARR14(2)                                                            <---------ALFIN1            <---------ARR14(2)                                                            --------->ANAC46           <------ZmHOX2a(1)                                          ------------>CBF<---------ALFIN1            <---------HSFC1(2)                                  <---------TOE2(3)      --------->ZAT14              --------->HSFC1(2)                                 --------->MYB52(1) <---------ATHB12                  <---------HSFB2a(1)                                 <-----------GT1------------>CBF          ------>ZmHOX2a(1)--------->TOE1(2)        *TSS             ---------->DOF2 <-----------GT1 <---------REM1(2)=======================HOX2a_HOX2a   ctccatacttcttcgaagacaaaactccaaagaaataacgatttctcaatcccaatcgctacacacacctaaaatcctatagcatagaaggatcgtgaga  8711200                       --------->YAB1                  <------ZmHOX2a(2)   <---------YAB1              ----------->HVH21                 <---------ARR11(3) --------->YAB1     <----------DOF2                --------->GLK1(1)  <-------TEIL     ------->TEIL--------->ALFIN1        --------->KAN4(1)      <---------YAB1      <---------CCA1(2)    ----------->HVH21      <-----       <---------KAN4(2)     <-----------GT1  <-------TEIL <---------AHL20(2)                  <-----   caaaaacagaacattcagagatcaaacaaaattacgattcattataggttcatgtatctttttaatgtgtgactgtgactgtgactaatacatggttgtg  8711300                                                      --------------->AtSPL8                <--------                                                      <---------ICU4                      -----------                                                    --------->GLK1(2)         <---------GLK1(2)                                                 <---------MYB59           --------->HSFC1(1)<-------                                          <---------HSFB2a(2)              <---------HSFC1(1)--------                                      <---------GLK1(2)                    --------->HSFB2a(2) ----ANAC46                           <---------ARR14(2)                   <---------HSFB2a(2) ----YAB1                             --------->ARR14(2)          --------->YAB1   --------->YAB1   tttgaatgttagagaaacactcacaaactaagaaaatgtggattctcgagaccgaatcagtactaaaatcacaatgtctagaaactcataaccagttaat  8711400                                                                                                 <---                                   ----------->GT1                                               ---- -MYB52(1)                    <---------ICU4                  --------->HSFB2a(2)       --------->ALFIN1 >GT1   <-----------GT1       --------->YAB1                  <---------HSFB2a(2)     <---------ANAC46 --AHL20(2)                --------->YAB1             <---------LBD16       <----------DOF2      ---- ->AHL20(2)             --------->YAB1           <---------YAB1--------->LBD16        --------->ALFIN1   tacagagttttttctaaacaagagtataacaataatcgtgtaaaattgtttatgtttcagggttccagagattagaagctttacaagggtgtgtgagagt  8711500                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                  <---------ALFIN1              <----                                                                --------->TCP15(2)              -----                                                                --------->TCP16(2)           <------NtERF2                                                               <---------TCP11(2)         <-------MYC3                                                               <---------TCP16(1)         <---------LBD16                                                               --------->PCF2             ------->MYC3                                                               <---------PCF5            <---------TGA1a                                                              <---------ANAC46           --------->TGA1a                                                              <---------PCF2             <---------O2          --------->At4g35610                              --------->ALFIN1              ============        <------ZmHOX2a(1)                                <-----------RAV1(1)             --------->O2 ------ZAT14                                             --------->ALFIN1        --------->ARR14(2) = ----->ZAT18                     --------->DAG2          <---------ANAC46        <---------ARR14(2) < ----->ZAT14    ---------->DOF2---------->DOF2         ------>ZmHOX2a(1)     <---------LBD16---------   ccagtgagaaggagatgagaaagaacagagaagaaaaggttttgctctgtttttatcctgtgtggggtccaccttgttaagcgggtttgccacgcggggt  8711600  Previous    Next  AGI:  At4g15250.1    Description:  zinc finger (B-box type) family protein. Identical to Putative zinc finger protein CONSTANS-LIKE 11 (COL11) [Arabidopsis Thaliana] (GB:O23379); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT3G21880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24166.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 8709942    to: 8711108    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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