Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ----------->GT1                                                                     <------MYB83            <---------WRKY18(1)                                     --------->MYB111(1)           --------->WRKY12                                        <--------P  --------->YAB1                                                 <---------ANAC58 <---------YAB1                                                  <---------ANAC58 -----ARR11(3)         --------->MYB52(1)                        <---------ANAC46 -GT1      --------->WRKY38(1)      <---------ARR11(3)<-----------GT1<------MYB46(1)   tctattataaacattgaccaaaacaaaactgagaacattatctatgttatatgatataacataccttgggtagggagagggaaaacagccaattttaggg  8639900              --------->ATHB12         <---------YAB1                                                <---------bZIP60(1)       <---------ICU4                                                  --------->bZIP60(1)       <---      <---------YAB1                                               <---------WOX13(1)           <----    --------->YAB1  <---------TOE2(3)                            --------->ATHB12               <----    <---------ICU4  <---------TOE1(3)      <-----------GT1   <<<<<<<<<TBF1              <<<<<<<<<TBF1   gaagaatcatcattcttcattgaaggtatgtctagtttcagtaatttactcttcttcttgttcttcttcattgacatcatcttcatcttcttcttcttgc  8640000                                                       ----------->HVH21                                                      =============HOX2a_HOX2a                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                                                     ==============HOX2a_HOX2a                                                     --------->CCA1(2)                                       ------->GAMYB<---------ARR14(2)                                      <------------AtMYB77                                     <---------At4g35610                                 --------->ANAC58   --------->ARR11(3)                                 --------->ANAC46   --------->ARR14(2)                                 --------->ANAC58   <---------AGP1                               --------->MYB52(1)   --------->AGP1                             --------->MYB46(3)     <---------ARR11(3)                             <---------MYB52(2)   ----------->ARR10                          <----------ID1    <------NtERF2         <---------ANAC58                          <---------ETT(1)--------->ETT(1)        <---------ANAC46                  - ------MYB59           --------->GLK1(2)<-----------HVH21         ----------->GT1                   < -----ANAC58          <---------GLK1(2)<-----------RAV1(1)        <---------ANAC58           -------- -----ANAC58        <---------YAB1   --------->At4g35610    <------ZmHOX2a(1)          <------ZmHOX2a(1)   ctacttgaaactcccctagcttaagattccgacaaacgcaactgtcggagtctagatctgaaggactggcgtaatttcgaggcaagagaggagaccaaag  8640100                                                                                              <------                                                                                             <-------                                    --------->HSFB2a(2)                          --------->ANAC46 -------->ZAT18       ---------->DOF2----------->GT1  --------->ARR11(3)      --------->ARR14(2) ---------ZAT14  --------->ARR14(2) <---------HSFB2a(2)   <---------ETT(2)    <---------ARR14(2) -->DOF2         <---------ARR14(2)<---------LBD16   --------->At4g35610  <------NtERF2   <----------DOF2   agagctctgtgagtagtcgaatccaaaagcagagttatctggaaatttgcagagaagctctcgacacattactggctgcaaatactcaactactttggtt  8640200                                                                               ---------->ID1                                                                         <----------DOF2                                                                        <------------------------ANAC81                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                       <---------RVE1(1)                                                                      --------->ARR11(3)                                          <----------DOF2             <---------ARR11(3)    *TSS                  <----------DOF2        <---------ANAC58             <---------ARR14(2)<---------DAG2                  <---------DAG2      <---------CCA1(2)               <---------AGP1   <---------ANAC58      ----------->GT1---------->ID1   ---------->ID1 <-----------GT1  --------->AGP1 <-----------GT1 -GAMYB<------ZmHOX2a(1)------>ZmHOX2a(1)<---------ANAC58             --------->ARR14(2)<----------DOF2 --MYB46(3)   <-----------GT1 <<<<<<<<<TBF1   <----------DOF2        <---------CCA1(2) <---------ANAC58   gtaatgagaggataattctccttttcctcttcttcttcttgtagctttctttgattcaccatttttgtttcagatctttttgtttttttgcttttttctg  8640300                                                                            ------->MYC3                                                                            <-------MYC2--------->ATHB51                                                                            <-------MYC4<---------ICU4                                                                 --------->ARR14(2)     -------->ATHB1                                                                 <---------ARR14(2)    <---------YAB1                                                                <------NtERF2       --------->AHL20(2)                                                              <---------ANAC46    ----------->GT1                                                             --------->ATERF1(1)  --------->ANAC55(2)                                                             <------NtERF2  -------->ABF1<-----------                                                            ------>NtERF2   ------->MYC2<---------AHL20(2)                                                           <---------RAP2.3(3)    <---------ANAC55(2)                                                           <---------RAP2.3(2)  <---------ANAC46                                                          <---------ANAC58  ------->MYC4-------->HAHB4                                                          <---------ANAC46  <-------MYC3--------->ATHB12            <-----------TBP                               <---------ANAC58 <---------ANAC55(2)          <----------DOF2                                <---------MYB46(3)--------->O2<---------ATHB51      <---------CCA1(2)             --------->ICU4      --------->ALFIN1   --------->ANAC55(2)  <---------ANAC55(2)               <---------YAB1     <---------MYB52(1)  <---------O2--------->ICU4  --------->ANAC55(2)             --------->YAB1      <-------GAMYB        --------->TGA1a  <---------ANAC58             <------ZmHOX2a(1)      ===============================MYC_MYB  <---------ANAC46        <---------WRKY38(1)        <---------MYB46(3)    <---------TGA1a  <---------ANAC58        <---------WRKY12  ---------->DOF2<---------DEAR3(1) <-----------HVH21  <---------ANAC55(1)   <-----------HVH21   =========================================bZIP_DOF   -----   agtttcgtgtttctttttatattttgggtcaaaggatgatgatgaagaaagacgaccgttgggggcggatttagaacacgtgtcatgtaattattggatt  8640400                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                           --------->DEAR3(1)                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                         --------->SPL7                                                                                        <---------SPL1(1)                            <---------MYB52(1)                                          <---------ALFIN1                           <-------GAMYB                                                --------->SPL1(1) <---------ARR14(2)     <---------DOF5.7(2)                                            ------>NtERF2 ------->TEIL           <---------At5g28300                                            <---------SPL7 --------->ARR14(2)    <-----------GT1        <---------WOX13(1)                   --------->ALFIN1<- -CBF              --------->DAG2           <<<<<<<<<RAP2.2  <------ZmHOX2a(1) <---------ZAT14 <----- ------>GT1       ---------->DOF2       <----------DOF2   <-----------RAV1(2)  --------->ZAT14-------   gtgaatctacttcatgtccgaaaagttaccgttggaagaagactttagattgccatcggggcaggattagattggacattgtacagtgccgcacggccga  8640500            <-----------GT1        --------->AHL20(1)        <---------AHL20(1)        --------->AHL20(2) ------ARR11(1) ----->GLK1(2) --------ARR10 ------ARR14(2) ----->ARR14(2) --->TEIL  <---------YAB1 -----ARR14(1)                                                                                     <- -----GLK1(2)                                                                            --------->YAB1 -----CCA1(2)                                       --------->YAB1<------ZmHOX2a(1)      <---------ICU4 --------ICU4                                  <-------TEIL     <---------TOE2(3)    <---------AHL20(2) -NtERF2<---------AHL20(2)         --------->ZAT6   --------->TOE2(3)            <---------YAB1 ----- -->RAP2.6(2) <---------YAB1    <---------MYB52(1)  >>>>>>>>>RAP2.2       ------->TEIL  <---------ATHB12   atcttgacattttattactattcaagtcttaaccgttacactattcagattcaatctaaatggactaaggagtatggacgtttatttttaatcataacga  8640600                                                                                                 <---                                                                                                 ----                                                                                               ------                                                                                               <-----                                                                                             --------                                                                                             <-------                                                                                           --------->AHL20(2)                                                                                         <---------AHL20(2)                 --------->YAB1                                                          --------->AHL20(2)                 <--------HAHB4                                                        --------->AHL20(2)        --------->ATHB12                                                               <---------AHL20(2)      <---------WOX13(1)                                                             --------->AHL20(2)   <---------AHL20(2)                                                                <---------AHL20(2)   <---------AHL20(1)                                                              <---------AHL20(2)   --------->AHL20(1)                                                              --------->AHL20(2)   --------->AHL20(2)<---------AHL20(2)        <---------AHL20(2)                --------->AHL20(2)<- --------AHL20(2)<---------ICU4                --------->AHL20(2)          ----------->GT1 <---------AHL20(2) ------>GT1     <---------ATHB12        --------->At5g28300      <----------DOF2 <---------AHL20(2)--   gttaattaattgatttgaatcatttttttttttgtttttctcggtaattttaaatacagttttttgtctttgaaaaacagtatatatatatatatatata  8640700         --------->AHL20(2)         <---------AHL20(2)       <---------AHL20(2)       --------->AHL20(2)     --------->AHL20(2)     <---------AHL20(2)   --------->AHL20(2)   <---------AHL20(2) <---------AHL20(2) --------->AHL20(2)                                      --------->GLK1(1) ------AHL20(2)                                          --------->CCA1(2) ----->AHL20(2)                                         --------->ARR11(3) --->AHL20(2)                                           <---------ARR11(3) ----AHL20(2)                                <---------AHL20(2) ->AHL20(2)                               --------->TOE2(3)                              --------->AHL20(2) --AHL20(2)                         <---------ICU4  ---------->DOF2                      <---------AHL20(2) --------AHL20(2)         <---------AHL20(2) --------->AHL20(2)                        --------->YAB1 ------->AHL20(2)        --------->AHL20(2) --------->AHL20(2)              <----------DOF2   -------   tatatatatatatatatatcaaaacgttttaattttaaaaatcacattaaattcaaaagatatcaaaaacatcacaaacttttagacaattttaaatgat  8640800  Previous    Next  AGI:  At4g15140.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK96081.1) Range:  from: 8639423    to: 8640292    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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