Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------MYB46(3)                                                          <---------AtMYB61                    <-----                                                        <---------MYB46(3)                     ------                                                       <---------ZAT6                         -------                                                 ------->MYC3                                 <------                                   --------->ARR11(3)  <---------AtMYB61                    ---------                                   <---------ARR11(3)  --------->ALFIN1                  ----------->GT1                           <---------YAB1<---------HSFB2a(2)                            <---------TOE2(3)                      <---------ZAT6     --------->HSFB2a(2)                       <-----------GT1---                 --------->YAB1 <---------AHL20(2) --------->ZAT14                --------->AHL20(2)     ---------->DOF2  ----------->GT1 <----------DOF2<---------ANAC46         <---------AHL20(2) ---- -->ZAT14       <---------YAB1  --------->AHL20(2) <---------ZAT14            --------->AHL20(2) <--- ---ZAT14   <---------GLK1(2)  --------->AHL20(2)<-------MYC3       --------->MYB46(3) ---------->DOF2   ctgtatgaaaagaagattatcatacagttaaaattaaaatcttttagaacatgtgtagtggtggtttctaaccaaagtttttaatttactaaagtaataa  8613700        --------->AHL20(1)     --------->AHL20(2) --------->AHL20(2) --------->YAB1 ----ICU4                                                 --------->AHL20(2) --->YAB1--------->AHL20(2)                           <---------AHL20(2)                            < -->ICU4--------->ARR11(3)                            --------->AHL20(2)                            - ---YAB1<---------ARR11(3)                     <---------ARR11(1)                               ----- >YAB1  <---------AHL20(1)                     --------->ARR11(3)                           --------- ------>YAB1 --------->AHL20(2)               <---------CCA1(2)                             <-------- ----->ICU4  <---------AHL20(2)           <-----------GT1 <---------AHL20(2)                <-------- ------YAB1 --------->AHL20(2) --------->AHL20(2)    --------->AHL20(2)     <---------AHL20(2)  <----   taataaaaaaaatatttaatttgaagagttttttaaaatagttttttcaaatcttttaaattaaaaactttctcatattttcttagaaattgttttaatt  8613800                               <---------REM1(1)                              <---------TOE2(3)                        <---------YAB1   <---------AHL20(1)   --------->ICU4   --------->AHL20(1) <---------ICU4   --------->ARR11(3)<---------YAB1                       --------->YAB1 ---------AHL20(2)<---------AHL20(2)            ----------->GT1 -------->AHL20(2)--------->AHL20(2)           --------->MYB59 ---->AHL20(2)    --------->AHL20(1)        --------->GLK1(2)                    --------->YAB1 >AHL20(2)        <---------AHL20(1)       --------->ARR11(3)                 --------->YAB1 -YAB1 ----------->GT1--------->YAB1       <---------GLK1(2)                --------->AHL20(2) -AHL20(2)   <---------YAB1<---------YAB1  <---------ARR11(3)           <----------DOF2 -----AHL20(2) <---------AHL20(2)         <---------RVE1(1)        <---------At4g35610         <-----   aaaaaaatattgtttattattttattattattaatgtaggcgagagattttggtaaaaaatcacaatgctgatgcttttaaaataatcaatttttctaag  8613900                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                <----                                 --------->TOE2(3)                                              -----                                --------->ANAC58                                                =====                              --------->MYB52(1)                               <-----------TGA1 -----                         --------->ANAC46                                     --------->ANAC46  <----                         --------->ANAC55(1)                                  --------->ANAC58  -----                         --------->ANAC58                                     --------->ANAC58  <----                         --------->ANAC58                 --------->AHL20(2)--------->MYB52(1)  =====                <---------ANAC58----------->GT1     <---------YAB1        <---------MYB52(2)    ===== <---------ANAC55(2)   <---------ALFIN1     --------->ANAC46       <------NtERF2    <---------ICU4 ----TOE2(3)    <---------ANAC58--------->ANAC58 --------->ICU4  <---------ANAC46  --------->ICU4<---   aatacataaatcagcaatgcttctcacacgccaaacgtaaatatagacgcgattatgaaaaaaaatcgcgtcgaaaacaaacgtcattatgtcattacac  8614000       <---------ATHB12      ------>MYB46(1)      ------>MYB83     --------->WOX13(1)   ------------>CBF <-----------GT1 ----MYC3 --->MYC3 --->MYC2 ----MYC2 --->MYC4 -----TGA1a              <---------AHL20(2) ---->O2             <---------YAB1 ===========================bZIP_DOF                                             --------->YAB1 ---->ANAC55(2)   <---------MYB52(1)                                     --------->YAB1 -----ANAC55(2)  <----------DOF2                                       --------->AHL20(2)     ------>ZmHOX2a(2) ---->TGA1a --------->DAG2                                       --------->AHL20(2)         <-------- -----O2--------->YAB1   --------->AHL20(2)                    *TSS   --------->YAB1        <-------- =====================bZIP_DOF   ---------->DOF2           ------------------------>ANAC81  --------- ===========================================bZIP_DOF    --------->MYB46(3) --------->AHL20(2)<------ZmHOX2a(2) ----MYC4  ---------->DOF2  --------->ICU4         <-----------GT1   --------->AHL20(2)     ---------   gtgttaccaatcaaaaagcctttatgtttaattagtaaaggctagtaagagatttacaacaaatgaaaaaaataaaaataaaaacataatccaagatccc  8614100                                    --------->ANAC58                                    --------->ANAC46                                    --------->ANAC58                                             <---                                 ----------->HVH21                                <---------ANAC58                               ------>ZmHOX2a(1)                              <---------ZAT2     ====                           <-----------GT1                <----------DOF2     --------->ZAT2    <---- <---------ICU4       <---------ARR11(3)                  <---------DAG2   ----------->RAV1(2)  <---- -ARR14(2)            <---------GLK1(2)           ------>ZmHOX2a(1)    <---------ALFIN1     ========= -ARR11(3)            --------->ARR11(3)      --------->ARR14(2)     <---------ALFIN1       <-------- >ARR11(3)          ----------->ARR10       <---------MYB46(3) <---------ANAC58   <---------ANAC46 >ARR14(2)---------->DOF2<-----------GT1   <---------TOE1(2)   <---------ANAC58   <---------ANAC58   taaaaattcccaaaaagaaccctagattttctcctctcacgctccttggttcctcactcgcttttgcttccccactcgcctgcttcgtgttcttctttgc  8614200           <-----------HVH21           <-----------TGA1          <---------bZIP60(1)          ===================================bZIP_DOF          --------->ANAC46          --------->ANAC55(1)          --------->ANAC58          --------->ANAC55(2)          --------->ANAC58          --------->bZIP60(1)          <---------O2          --------->bZIP60(2)          --------->O2          --------->TGA1a          <---------TGA1a    ================bZIP_DOF    <----------DOF2    <---------ANAC58                                            ------>MYB83 -------DOF2         <-----------GT1                                               ------>MYB46(1) ===================bZIP_DOF                           <------NtERF2              --------->WOX13(1) -----ANAC58    <---------GLK1(2)     ---------->ID1 <---------ANAC46            --------->AtMYB61 -----ANAC58--------->TGA2(2)     <----------DOF2 <---------RAP2.6(2) ---------->DOF2 ===================bZIP_DOF      <---------MYB52(1)<------NtERF2----------->GT1 --------->MYB46(3) --DOF2 <-----------GT1<---------ANAC58           --------->ALFIN1--------->At5g28300   ---------->DOF2   tttgctcttttcacgtcagaattttgccttccctccctttgtctctctctgggtggccgagaaaatacagtaaaaagccctcaccaatccaaaagtttga  8614300                                   <---------TOE1(2)     ---------->DOF2                ---------->DOF2    ------>ZmHOX2a(1)              <---------TOE2(2)<-------TEIL             <---------YAB1    --------->LBD16               <-----------RAV1(2) --------->TOE2(3)    <---------At4g35610      <  <---------LBD16     --------->ATHB12             --------->CCA1(2) <----------DOF2 <---------TOE2(3)   catttcctgaattttgtagtctcttcatttgaattctcaggttttctcttaagatacattaaagtctctgtcttttatgctgatactaatgaaagttcag  8614400                                     --------->HSFB2a(2)                                     <---------HSFB2a(2)                                  <---------------AGL15                                  --------------->AGL15                               <---------------AGL15                               --------------->AGL15                          <---------DAG2                                             ------>ZmHOX2a(1)                          <----------DOF2                     <---------MYB52(1)--------->GLK1(1) ----------DOF2        <---------ARR11(3)             ----------->HVH21      <---------TOE1(2)   <---   ttctttcactgaaattttagaaccagaacttttctactactagaagtatgttgtctctgactctcttagtttgagttctcaggtctccttctcttatttg  8614500                                              --------->YAB1                                           --------------->AGL15                     <----------DOF2       <---------------AGL15                    <---------ANAC58    <---------------AGL15      --------->ARR11(3)            <----------DOF2        <----------DOF2                 <---------ARR11(3)       <-----------GT1             <---------DAG2      <-----------RAV1(1) <----------DOF2 ------ANAC46       <---------ANAC58    --------------->AGL15  ---------->DOF2              ---------   tgtgaaattttactcttttttggctttagaaacagaacttttctactattagaagttatgttgttgaaagttcttcactttcatttgattccattgattt  8614600  Previous    Next  AGI:  At4g15090.1    Description:  FAR1 (FAR-RED IMPAIRED RESPONSE 1). similar to FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3) [Arabidopsis thaliana] (TAIR:AT3G22170.2); similar to FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3), transcription factor [Arabidopsis thaliana] (TAIR:AT3G22170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41786.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41954.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76480.1); contains InterPro domain Zinc finger, PMZ-type; (InterPro:IPR006564); contains InterPro domain Zinc finger, SWIM-type; (InterPro:IPR007527); contains InterPro domain FAR1 (InterPro:IPR004330) Range:  from: 8614063    to: 8618142    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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