Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------ANAC58                    --------->ANAC58                           <---------ANAC58                    --------->ANAC58                --------->DAG2                               ---------->DOF2               ---------->DOF2 ---------->ID1             <---------WOX13(1)             --------------->AGL15                    --------->HSFB2a(2) -ALFIN1     <---------------AGL15                <----------DOF2 >ANAC58    ----------------->AGL2               <---------ANAC58 >ANAC46    ----------------->AG                 <---------ANAC58 >ANAC58    ----------------->AGL1   <----------DOF2  <---------HSFB2a(2)                --------->YAB1   ttctcccataaataaccaaaagcggtattgtttgtctctctttctctcattcctttccagattgaaagcatctaagacatgtcgaacacaaacatatcaa  8597000                                           --------->WRKY12<-----------GT1                                       --------->DAG2    --------->YAB1                               --------->ANAC46  <---------MYB52(1)                              <-------TEIL ----------->HVH21                            --------->ARR14(2)  --------->LBD16                          ---------->TaMYB80<---------WRKY18(1)             <---------YAB1 <---------ARR14(2)<---------LBD16  --------------->AGL15       <----------DOF2    <---------KAN4(2)--------->WRKY38(1) <---------------AGL15  ------>ZmHOX2a(1)  ---------->DOF2  ---------->DOF2   <---------YAB1                          <----   tgtccttctctttttatgtttgtaaaagaatatacgtagataaagttgaccggaagttattataccttgtaatggtatgtgtgattcttcatagaagtat  8597100                                                                                                -----                                                                                                <----                                                                                            <--------                                    <---------ARR14(2)                                      <--------                     <---------GLK1(1)                                                      ---------             <---------ANAC58       --------->ARR14(2)                   --------->AHL20(2) ---------             <---------ANAC46      <---------CCA1(2)                ----------------->AGL3<---------TOE2(3)             <---------ANAC58     --------->LBD16              <---------AHL20(2)         -----------         <-------GAMYB     <---------ALFIN1                   --------->AHL20(2)     ----------->GT1        <---------MYB46(3) --------->ANAC46             --------->WOX13(1) --------->AHL20(2)<------- -----YAB1<--------P --------->GLK1(1)    <-----------GT1 <---------ATHB12 <---------AHL20(2)<-------   gatcaaatgctggttgcttgaagaaatccacacatccgtatatttctccatctatggtctatcatttaatgccatatatatatagagaggttaagatatt  8597200        <---------AHL20(2)        <---------AHL20(1)        --------->ARR11(3) ---->AHL20(2) -----AHL20(2) -ARR11(3)                                                              --------->MYB52(2) -AHL20(1)                            --------->CCA1(2)                 <---------MYB46(3) >AHL20(1)                           --------->ARR11(3)            --------->LBD16 >ARR11(3)                           --------->ARR14(2)          <---------LBD16 >ARR10 --------->AHL20(1)           <---------ARR14(2)     --------->WRKY38(1)                ------ --CCA1(1)                           <---------ARR11(3)   <----------DOF2<-------GAMYB         <----- --RVE1(1)                  <---------GLK1(2)    --------->TOE2(3)<---------ANAC46 <----------DOF2   aattgtataatatatagagaacaacaacaagattgtgaagatatacaaaaaccttgatgactttgactgcgggtttgttgatagtctttagtctcttctc  8597300                                            --------->ATHB12                                            -------->ATHB1                                            --------->YAB1                                          <---------ARR11(3)            ---------->DOF2                                      --------->ANAC46           <---------YAB1                                     --------->LBD16           --------->YAB1         <----------DOF2            --------->HSFB2a(2)       <---------ATHB12      <---------ARR11(3)        <---------ANAC58              <---------ATHB51<-------TEIL      --------->ARR11(3)        <---------ANAC58    <---------YAB1  <-----------GT1             <----     <---------CCA1(2)   --------->ARR11(3) <---------ICU4 --------------->AGL15  <---------ALFIN1 --->HSFB2a(2)           <---------ARR11(3)<---------YAB1 =========================================== ----HSFB2a(2)       ---------->DOF2<---------HSFB2a(2)   ----------------->AGL3----------->RAV1(1)<-   gatttctaaatctttagatttagaaaagctcttggcttccacaaaatcattgttatgacttccaattatgttaccaaagatgcaacacattaacaacatc  8597400                                                                                          --------->CCA1(2)                                                                                         <---------AHL20(1)                                                                                         --------->AHL20(1)                         <---------YAB1                                          ----------->GT1           <---------At4g35610                                                  <---------TOE2(3) ---TEIL   --------->At4g35610 ------------>CBF        <------------CBF       ---------->DOF2 ===================================MADS_MADS     ----------->GT1            --------->CCA1(2)      < --------CCA1(2)    --------------->AGL15 ---------->DOF2                   --------->ARR11(3)      -   catatcactgggcctctcacttccattttgatcaacaatagagagaaaggaagagtttattgattttgaagcatggaagataaaggtttaatatataagg  8597500                <---------AHL20(2)                --------->AHL20(2)                                                               <---                --------->AHL20(1)                                                               <---               --------->AHL20(2)        <---------ICU4                                          ----               <---------AHL20(2)      <---------AHL20(2)                                       -----              --------->AHL20(2)       <---------YAB1                                          <-----              <---------AHL20(1)       --------->AHL20(1)                                   <--------        ==============================RAV<------------CBF                                  <---------        ----------->RAV1(1)           --------->YAB1                                       --------->AHL20(2)       <----------ID1                 --------->AHL20(2)                               --------------     --------->ANAC58                <---------ATHB12                                  <---------YAB1     --------->ANAC58            ------------>CBF             ---------->DOF2    <---------ARR11(3)   ---------->DOF2          ------>ZmHOX2a(1)          <----------DOF2           --------->ARR11(3) ---------HSFB2a(2)         --------->LBD16 <---------WRKY18(1)            --------->WOX13(1)-------- -------->HSFB2a(2)       ----------->RAV1(2)          <---------DAG2    ------------>CBF <---------YAB1   gtcgagaaagcaacaaaataatttgctctcctgaattcaataatattgaccaaaatgctttttggaaagacatatatcaatgacatcttcttattatata  8597600                                       ------->MYC3                               --------->YAB1 ------------AtSPL8          <---------ARR11(3)                        ------->MYC3 ------------AtSPL3          --------->ARR11(3)              <---------GLK1(2) ----->DAG2               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <-------MYC3               --- ----->DOF2          <---------MYB52(2)<-------MYC3          --------->ARR11(3)                  ---- ----AHL20(2)       <xxxxxxxxxxxxxxxxsmallRNA(i)             <---------ARR11(3)            <---------DAG2 -AHL20(2)       xxxxxxxxxxxxxxxx>smallRNA(s)          <------ZmHOX2a(2)                   <--------- ------AGL15   <-----------GT1<------ZmHOX2a(2)       <---------ARR11(3)                <-----------GT1 ->AGL15    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->ARR11(3)               <-----------GT1 --->TBP  ---------->DOF2--------->ANAC46----------->GT1   <---------TOE2(3)     <---------AHL20(2)   aagtacggttttgaaagttactaactcacgagatcataacacatggttatttgaacgatctaagattttgacatgtgtttgatttttttttaactttttc  8597700                                                                                       --------------                                 <-------TEIL                                          <-------------                            --------->AHL20(2)                                  <---------AHL20(2)              <---------------AGL15                                             --------->AHL20(2)             ========================================================================================             ----------------->AGL3                                            --------->AHL20(2)  <---------AHL20(2)       <---------AHL20(1)              >>>>>>>>>RAP2.2     <---------AHL20(2)  --------->AHL20(2)       --------->AHL20(1)           <---------CCA1(2)      <---------AHL20(1) --->ZmHOX2a(1)    ---------->DOF2            --------->AHL20(2)           <---------YAB1 ----->TOE2(3)--------------->AGL15           <---------AHL20(2)--------->AHL20(2)     ============== -DOF2   <------ZmHOX2a(1)--------->AHL20(2) <---------AHL20(2) <---------AHL20(2)   <-----------GT1<   ctaaaaaaataggaaactaaaaaaagaaatatatatacatatactaatttatatgtttatatctaaaaaaataacttataatttttttaactaaaataga  8597800                                        <---------AHL20(2)                                        <---------------AGL15                                        <---------YAB1                                    <---------AHL20(2)                                 <---------AHL20(2)                                 --------->AHL20(1)                                 <---------AHL20(1)                                --------->AHL20(2)                            <---------AHL20(2)                            --------->AHL20(2)                 ----------->GT1--------->YAB1            <---------CCA1(1)     --------->YAB1         --------->AHL20(1) ----------->GT1    --------->ZAT6         --------->AHL20(2) <---------TOE2(3) <-----------GT1  <---------AHL20(1)  --------->MYB52(1)   --------->AHL20(2)   --------->YAB1<---------RVE1(1)      <---------AHL20(2) ->AGL15 <---------TOE2(3) <---------AHL20(2) <---------YAB1  <---------AHL20(2) --------->AHL20(1) --AGL15 <---------YAB1<---------AHL20(2)  <---------YAB1<---------ARR11(3)      --------->AHL20(2) ==MADS_MADS   <---------ANAC46 <---------AHL20(2)       --------->ARR11(3)     --------->AHL20(2) =======================================================MADS_MADS       ----------->GT1            >> ---------MYB52(2)     <---------YAB1   --------------->AGL15 --------->AHL20(2)<---------AHL20(2) >>   aaactaacaataagatagagtgtatataattaaattatattttttattatggtaaaatagatatttaaactgtattgcaaaattaaatttgtaagattga  8597900  Previous    Next  AGI:  At4g15056.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G15053.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10190.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80518.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 8595981    to: 8597426    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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