Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->ANAC46                                                           --------->ANAC58                                                           <---------ALFIN1                                                           --------->ANAC58                                                    <------NtERF2<-------MYC2                                                 --------->ATERF1(1)                                                <-----------HVH21------->MYC3            -------->P                                                <---------ATERF1(1)<-------TEIL         <-----------GT1                                              <---------ANAC58   <-------MYC3    <---------ICU4                                              <---------RAP2.6(2)------->MYC2   --------->ICU4        <---------ZAT18                  <---------ICU4  <---------ALFIN1  --------->ANAC58<---------DAG2        --------->ZAT18                  xxxxxxxxxxxxxxxx>smallRNA(i)      --------->ANAC58--------->TOE2(3)   <----------DOF2                       <------ZmHOX2a(1) --------->ANAC46--------->ANAC46--------->TOE1(3) ----->ZAT14                      <-------TEIL<---------ANAC58<---------ALFIN1---------->DOF2   acagtctttgtggaccatcagattgcattgaagacatacataaggattgcggtcgccttccacaccacatgcattacaagtaaagatgactaaccttacc  8563200                                                        <-----------GT1                                                      <---------DAG2                                                      <----------DOF2                                                     <---------ANAC58                                                     <---------ANAC58                                                  <--------P                --------->ICU4                                                 <-------GAMYB             <---------TOE2(3)                  <-----------RAV1(1)           --------->MYB55(2)   --------->ZAT14                  <---------AtMYB61             <---------MYB46(3)   <---------ZAT18              <---------ANAC58               <---------MYB46(3)      <---------ZAT14          -------              <---------ANAC58              <---------AtMYB61        --------->ZAT18     --------->ANAC46            <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------AtMYB61---------->DOF2          <---------ALFIN1            <---------YAB1                  --------->ALFIN1 --------->AtLEC2     <-----------RAV1(1)    --------->ALFIN1    <----------DOF2  --------->ATHB12  <---------------AGL15 <---------TOE2(3)  -   aagagggtgaggctatgcttgtggtgctttgggttacaaatagtgagtggtggttgctttaccatacaaagtggactaatgtttatgttgcacaccgtgc  8563300                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                <---------ARR11(3)                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                                                                --------->ARR11(3)                                                                                <---------ARR14(3)                                                                                --------->AGP1      -                                                                                --------->ARR14(3)  -                                                                               <---------GLK1(1)   --     --------->MYB52(1)                    <-----------HVH21             <---------AtLEC2         --- --------->ANAC58                       <---------At4g35610       <---------MYB46(3)             <--- --------->ANAC58  <---------ANAC58     --------->At4g35610       <-----------RAV1(1)       --------- -->AtLEC2  <---------ZAT6       <---------ICU4            <---------At4g35610 --------->GLK1(1) ---- ------>GAMYB      <---------ANAC58     <------NtERF2     <---------TOE2(3)   ----------->ARR10  <---   aacgagcaaacggagtcttaagcttgcacagacaaaaatggcatcggtcatttgcatattgaggtgatttgttgggcatggagatcttgagagagtgacc  8563400                                                              --------->ZAT14                                                              <---------ZAT14                                                      <---------ALFIN1                                                    --------->DEAR3(1) --------->ANAC58 -------->ANAC58                           <---------At4g35610--------->ZAT18 -------->ANAC58                           ------>NtERF2    --------->LBD16 ------->SPL7           <---------LBD16 <---------ZAT18    <---------ANAC58 ------>MYB52(1)  ---------->DOF2       --------->ZAT14    <---------ANAC58 ------SPL7 <---------ZAT2    <-------TEIL --------->At4g35610<---------ZAT18 -->HVH21 <---------GLK1(1) --------->ARR14(2) <---------MYB52(1)  --------->ATHB12 ----->ZAT18<---------At4g35610         <---------At4g35610<---------ANAC46 ------ZAT14--------->At4g35610    <----------DOF2  --------->RAP2.6(2)--------->ANAC58         -----   gcacggagatggatagctgagaaagccctggatacatctttgtgcagccgatagccgcactccgtgcactgataggcaatgccatttcgactattacaaa  8563500                                                         ---------->DOF2                                                      <------NtERF2                                                      --------->ANAC58                                                  <-----------TGA1                                                  ------->GAMYB                                                 --------->ANAC58                                                 --------->bZIP60(2)                                                 --------->ANAC58                                                 --------->ANAC46                                            --------->ANAC58                                            --------->AtLEC2                                            --------->ANAC58                                 --------             --------->AHL20(2)             --------->ANAC46    --------->MYB59       <-------TEIL         ----------->GT1                 <-------TEIL --------->ANAC58               --------->GLK1(2)    --------->ANAC58                <------ZmHOX2a(1)------>NtERF2                  <---------ARR14(2)    --------->ANAC58              <---------TOE2(3)  ----------->RAV1(1)            --------->ARR14(2) ----->DOF2>>>>>>>>>GATA-1      ---------->DOF2--------->MYB52(1)                   <---------GLK1(2)   aatcgcaagaatagataaattcttctgtacatgataaaggatgttcatgcaacggcaccaaaagattaggcctggtctctatttcagattcagtagaaag  8563600                                                                                               <-----                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                       --------->ARR11(3)                                                                        <-----------TBP--------->ARR14(2)                                                                      <----------DOF2  --------->ARR14(3)                                                                    ===========================HOX2a_HOX2a                                   *TSS                             ============================HOX2a_HOX2a                                  --------->ALFIN1                  ------>ZmHOX2a(1)  <---------ARR14(3)                                <------MYB83                    <---------ARR14(2)     <---------ARR11(3)                              --------->CCA1(2)                 --------->ARR14(2)     <---------AGP1  <---------YAB1 ---------->DOF2<------MYB46(1)               --------->HSFB2a(1)      <---------ARR14(2) --------->AHL20(2)  ---------->DOF2           <---------DAG2<---------TOE2(3)        <---------CCA1(2) -->DOF2    ------->GAMYB---------->DOF2   ------------>CBF  <---------TOE1(3)  <------------CBF   catttttatttcaaccgagaaaagaaagaaagataggtgttgagtttcaatttttgttttgctaaggttcctctttatgtagaattgtagatcttggaac  8563700                                              <---------AHL20(2)                  <---------AHL20(2)          --------->AHL20(2)                <---------AHL20(2)          <---------AHL20(2)              <---------YAB1              <---------AHL20(2)           <---------YAB1                --------->AHL20(1)          --------->AHL20(2)             <---------ARR11(3)    <---------ICU4     <-------TEIL<---------YAB1    <-----------GT1            <---------YAB1         <---------At4g35610 --------->AHL20(2)   <---------AHL20(2) <---------AHL20(1) --------->YAB1           --------->At4g35610 ----GLK1(1)<---------AHL20(2)  --------------->AtSPL8     <---------ATHB12----------->RAV1(1)      -   tcataaattcatttttatttttattttcttagtctttgtactatatatttttatatcaccaatgataatggttttgccaacacagacagctaattcaaac  8563800                                                     <<<<<<<<<<<<<<<<<LFY                                                --------->TOE2(3)       --------->ANAC46                       ------>MYB83 --------->AHL20(2)                           ------>MYB46(1) --------->AHL20(1)  --------->AHL20(2)    --------->MYB46(3)                                 ------- -------->YAB1       <---------AHL20(2)  --------->ANAC46                         <------ZmHOX2a(1)   aaaaataatacacaagtatacatataaatagtagtagttgtccaaaccatccttgaaacaatggggagaagaagtttgcccataggaaaaactgagaagt  8563900                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                 --------->AGP1                 --------->ARR11(3)                 <---------ARR11(3)                 <---------AGP1       <------------ATHB5       <--------ATHB1       --------->ATHB51       <---------ICU4                                                           <---------ARR11(3)       --------->YAB1                                                           <---------AHL20(1)       --------->ATHB12                                                   --------->ANAC58       -------->ATHB1                                                     --------->ANAC58      <---------ATHB51                                               ------->MYC3      <---------YAB1                                                 ------->MYC2      --------->ICU4                  --------->YAB1                 <-------MYC3      <---------ATHB12    <---------YAB1              <---------LBD16<-------MYC2    <---------AHL20(2) ---->GT1 --------->AHL20(2) <---------YAB1 <-----------GT1   <-----------GT1   --------->AHL20(1)<--   attaaacaataattgaatagatctagtgactattagtatatcaaaatcacatttctctcggaattaacccatgtgcaaacaatatttttaattcgagttt  8564000                                                    --------->AtMYB61                                         <---------AHL20(2)                <------MYB83             --------->AHL20(2)  --------->ATHB51                <------MYB46(1)         --------->AHL20(2)   --------->YAB1  <----------DOF2               <---------MYB46(3)    --------->AHL20(2)     <---------YAB1   <---------DAG2         --------->MYB52(1)          <---------AHL20(2)  <---------------AGL15      <----------ID1  - -------AtLEC2--------->ALFIN1      --------->AHL20(2)   --------------->AGL15    --------->YAB1    -   gtatgaacaaataagggtgggtttgaataggcatactatttatttaattcgaaaccatacctataattgtattagttaactttattagaacaaaaataga  8564100  Previous    Next  AGI:  At4g14980.1    Description:  DC1 domain-containing protein. similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G54020.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G04500.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G54050.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain DC1 (InterPro:IPR004146) Range:  from: 8561873    to: 8563635    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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