Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->At4g35610   --------->AHL20(2)                          --------->CCA1(2)                                  ---   <---------AHL20(2)                         <---------AHL20(2)                                ----- --------AHL20(2)             --------->YAB1  --------->AHL20(1)                                ----- ------->AHL20(2)        <<<<<<<<<GATA-1      <---------AHL20(1)       --------->ARR11(3)      ------ ------>AHL20(2)      <---------AHL20(2)  <---------AHL20(2)    <---------AHL20(2)      --------->YAB1 ---YAB1             --------->AHL20(2)  --------->AHL20(2)    --------->AHL20(2)       ----------->GT1   tttaattaaactatagtttaaaattttatctataacaatactatataatatatgagttgaaccgattaaatgtgatattggtttttgtaatagtaaaaaa  8544800                                                       <---------AHL20(1)                  XXXXXXXXXXXXXXXXXXXX>MIR834          <---------ARR11(3)                  <---------YAB1                     <---------AHL20(1)       --------->TOE2(3)                             --------->ARR11(3)       ----------->GT1                     <------------MYB.PH3(2)      ----------->GT1                      <---------MYB59        <---------YAB1  <---------AHL20(2)                     <-----------GT1         <---------AHL20(2) --------->YAB1 --------->YAB1       <---------AHL20(2)--------->AHL20(1) --------->AHL20(2)--------->YAB1   --------->AHL20(2) --------->ARR11(3)                    -------- ------>YAB1 --------->YAB1        <---------YAB1    --------->AHL20(1)   ------>ZmHOX2a(1) --------- ---->AHL20(1) <---------YAB1     --------->AHL20(2) <---------ARR11(3)  --------->TOE2(3)<---------- ---->AHL20(2) ----------->GT1 --------->YAB1--------->MYB52(1)  <---------AHL20(1)<----------DOF2 --->YAB1    <---------ICU4----------->GT1 <---------MYB52(2)  <---------YAB1      <---------DAG2   taataaaaatgttaaaaatgataatagtagcgataatattatataactaactaaaaatattttctattattttttcctaaaaaaactttttttaactgta  8544900                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                       --------->ARR14(2)                                                       <---------ARR14(2)                                                   <---------LBD16                                                  <<<<<<<<<SPL4                                                  <<<<<<<<<SPL7                                                 <---------SPL7                                               <---------------AtSPL3                     <---------AHL20(2)       ------->MYC3                    --------->AHL20(2)        ------->MYC2     --------->YAB1          <---------ANAC46       <---------AHL20(2)                     <-------MYC3    <---------ATHB12         <---------ANAC58 --->GT1    <-----------GT1                   <-------MYC2 ------>ZmHOX2a(1)           <---------ANAC58 >ZAT6--------->AHL20(2) ----------->GT1      <------------------SPL14       ---------->ID1         - -GT1 <---------AHL20(2) --------->YAB1----------------------->TaNAC69(2)<----------DOF2    ------->TEIL   acaaatttttaaatttactcaattttatcgtaaaaatagaaaatggcacgttgtacggatcctaatcaaactatactttgtttttttttgtgtgtatgtg  8545000                                                                      --------->ANAC58                                                                      --------->AtLEC2                                                                      --------->ANAC58                                                                      --------->ANAC46                                                                      ------>MYB46(1)                                                              ------->GAMYB                 <-------GAMYB             <---------LBD16    --------->ANAC46--------->ANAC58               <-------TEIL           <---------At4g35610  --------->MYB52(1) --------->ANAC58  --------->YAB1 --------->TOE2(3)  <---------HSFB2a(2) <------ZmHOX2a(2) --------->ANAC58  <---------ICU4----------->GT1     --------->HSFB2a(2)<-----------ARR10  --------->ANAC58 ---------- -------->ARR11(3)              <----------DOF2     --------->MYB46(3)------>MYB83      <----------DOF2   aaaatcatggttttaagttcgttaaattcgcatactttccagatgtccggttcaaccgatctaaccgaaaccaagcaagaacgaaatgggctttaaagcc  8545100               ------->TEIL            <---------ATHB12          --------->WOX13(1)        <---------ATHB12        ------------>CBF       ------>MYB46(1)                                              <----------DOF2          --------       ------>MYB83                                          <---------ANAC46                <-------    --------->MYB46(3)                                       <---------ANAC58                <-------    ------------>CBF                                   <---------ANAC46                      -------- <---------ZAT18                                       <---------ANAC58                      <------- <---------ZAT14                                 <---------AHL20(2)*TSS                     <-------- --------->ZAT14       <------ZmHOX2a(1)     ----------->GT1 <---------ANAC58     <---------GLK1(1) >DOF2--------->WOX13(1)               --------->ZAT14 <---------ANAC58           --------->GLK1(1)   cagtgaaccaatcaatgaatgtagaggaacgagagtttttctgaactctgttaaatttcgtttgcgtcttctttccattctctgaattccttccatatct  8545200                                                                                     ----------->GT1                                                                                <---------ANAC46                                                                                --------->ANAC55(2)                                                                                <---------ANAC55(2)                                                                           <---------TGA1a                                                                           --------->ANAC55(2)                                                                           <---------ANAC55(2)                                                                           --------->ANAC58                                                                           --------->ANAC55(1)                                                                           --------->TGA1a                                                                           <---------bZIP60(1)                                                                           --------->ANAC46                                                                           --------->bZIP60(2)                                                                           <---------O2                                                                           --------->ANAC58                                                                           --------->bZIP60(1)                                                                       <-----------TGA1                                                                       <-----------HVH21                                                                      <---------O2  --------->MYB59                                                                      --------->TGA1a<------MYB46(1)                                                                      --------->O2 <---------MYB55(1)                                                                      <---------TGA1a<------MYB83                                                                      --------->ANAC55(2)                           ------>ZmHOX2a(2)                          --------->ANAC46                          <---------GLK1(1)                           --------->ANAC58                          --------->GLK1(1)                           --------->bZIP60(2)                          <------ZmHOX2a(2)                           --------->ANAC58                         --------->AGP1                               --------->ANAC55(1)                         <---------AGP1                               <---------ANAC55(2)                         --------->ARR11(3)                         <---------ALFIN1--------->MYB46(2)                         <---------ARR11(3)                 =========================bZIP_DOF ->ARR11(3)              <---------ARR14(2)   <---------MYB46(3)  <---------ALFIN1<---------MYB52(1) --ARR11(1)              --------->ARR14(2)   <------MYB83  ====================bZIP_DOF --ARR14(2)             <---------CCA1(2)     <------MYB46(1)    <---------ZAT18<---------ANAC58 ->ARR14(2)     ---------->DOF2           <-----------RAV1(1)    --------->ZAT18<---------ANAC58 --ARR11(3)  --------->HSFB2a(2) <---------At4g35610        ---------->DOF2--------->O2 -CCA1(2)    <---------HSFB2a(2) --------->At4g35610       --------->AtMYB61 <---------MYB52(1)   ctctctgtgtgtcttctacaaagaccagatctctcatctgtgttttgttggtttatctcgaccaaagcccacacgtcacgttacgttaggttacaaaaca  8545300                                                                          <---------ARR11(3)                                                                         <---------CCA1(2)                                                                  --------->GLK1(2)                                                                  <---------ARR14(2)        <--------                                                             --------->ANAC58           <---------HSFB2a(2)    <-----------GT1             ----------->GT1              --------->ANAC58    <-----------GT1   <-    ---------->ID1         --------->AHL20(2)              ---------->DOF2--------->ARR11(3)---------   <-----------GT1      --------->YAB1         ------>ZmHOX2a(1)  <---------ARR11(1)    --------->HSFB2a(2)   agttttttcccttataaaaaaaacattgataaaatcgaaaaatcaattcctattttgtttccaaagcaaatctatatatctattacccatctcgaattcg  8545400                                  --------->GLK1(1)        --------->CCA1(2)                                  <---------GLK1(1)       --------->ARR11(3)                <------MYB83  ------->TEIL             --------->ATHB12               <---------ARR11(3)                <------MYB46(1) ------>MYB46(1)         ----------->RAV1(1)         <---------MYB52(1)                    <---------TOE2(3) ------>MYB83         --------->ANAC58          --------->GLK1(2)              <------MYB46(1)      - -ARR14(2)            --------->ANAC58          <---------ARR14(2)             <------MYB83--------->MYB59 --------MYB59        --------->ANAC46          --------->ARR14(2)            --------->MYB46(2)    - >ARR14(2)          ------>ZmHOX2a(1)     <---------AHL20(2)  ----------->GT1 --------->MYB111(2)   -   accgaacccatgttctaatctccttcgcaacattggaaatctattttaaaaatccgttgagatatagttatataagtagtttggtgactcaattaggttt  8545500                            <---------ANAC46                            <---------ANAC58             --------->ANAC58                       <---------REM1(1)                 --------->ANAC58                     <------MYB83                      <-----------RAV1(2)                     <------MYB46(1)             <---------ANAC58              --------->ARR14(2)--------->ARR11(3)   ------>ZmHOX2a(2)              <---------ARR14(2)<---------ARR11(3)  <------ZmHOX2a(2)        --------->CCA1(2)   <---------ANAC58=======================RAV   ---------->DOF2  --------->MYB55(2)      <-----------RAV1(1) -------->ANAC46    <---------MYB46(3)      <---------REM1(1)                                       < -------->ANAC58  ----------->RAV1(2)  <---------At4g35610                                       ---- -------->ANAC58------>ZmHOX2a(2)   <<<<<<<<<TBF1<---------ANAC58     <----------DOF2           <----   acacacaaagacatgggatcggctggtgtagcgagttcttcttctgatgttgcgatctcaggcaagtttcttctttttgtttttgggttttcgatttttg  8545600                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                              --------->CCA1(2)                                                             <---------ARR14(2)                                                             --------->ARR11(3)                                                             <---------ARR11(3)                                                             <---------AGP1                                                             --------->AGP1                                                             --------->ARR14(2)          --------->YAB1                                  <---------HSFB2a(2)       --------->WOX13(1)        <---------CCA1(2) <---------YAB1              --------->ATHB12 ----------DOF2    --------->At4g35610          <---------ATHB51           <----------DOF2<---------- ------>ID1        <---------At4g35610    --------->CCA1(2) <---------GLK1(1) <---------YAB1 -------GT1     <XXXXXXXXXXXXXXXXXXXXMIR1886.1  --------->ICU4--------->At4g35610       <---------ANAC46   accttttatcaattagatttcatctcaattcgttcatatcatggatacaaattatgaattcgagatctgaatcacagcttttgatttgttttgtgttgtt  8545700  Previous    Next  AGI:  At4g14950.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71145.1); contains domain PTHR10281:SF1 (PTHR10281:SF1); contains domain PTHR10281 (PTHR10281) Range:  from: 8545167    to: 8548051    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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