Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->LBD16                            <---------HSFB2a(2)                         ------->GAMYB                                              ---------->DOF2                       --------->At4g35610                                       <---------TOE2(3)             <------ZmHOX2a(1)                             ----------->GT1       --------->ANAC58       --------->YAB1  <---------At4g35610   <---------LBD16            --------->TOE2(2) -------->YAB1     <-----------GT1         --------->ARR11(1)   --------->REM1(1)--------->ANAC58---- ----->YAB1 ----------->GT1 --------->HSFB2a(2)--------->LBD16 <-------TEIL<---------YAB1 --------->GLK1(1)   aataatcaaacatgaggaaattttcaactcccagaaaatcaaattgatacggagaaaggtttagttacatctaacatatgatcaaggaaagggattccag  8529700                                  <---------ICU4                                  --------->YAB1                              <---------AHL20(2)                              --------->AHL20(2)                                           <---------WOX13(1)                             --------->AHL20(2)                                       <---------At4g35610                       ------>MYB46(1)                                                <---------ZAT2 --------->At4g35610   ------>MYB83                                                   --------->At4g35610 <---------At4g35610   --------->AtLEC2                                               --------->ZAT2 ----->ALFIN1     <---------WRKY18(1)       <-------TEIL<----------DOF2 --------->ANAC46 --------->ATHB12   tggagctatctgaaactccatgaccatccaaattaatcttcactgatacatttgtttcctttgtttctctcttcacttcacctattcgagctgattgaaa  8529800                                                                                               ------                                                                                              <------                                                                                              <------                                                                                      <---------ANAC46                            ----------->GT1        --------->ANAC58                  --------->MYB55(2)                       --------->ICU4              --------->ANAC58       ----------->RAV1(2) <------                   <------ZmHOX2a(1)             <-----------RAV1(2)    <-----------GT1 ----------->HVH21             <---------GLK1(1)          --------->GLK1(1)      ---------->DOF2       <---------MYB46(3)   tcaacaaaaactaagaaatcaggaaatgaatagtgaaatgagatttcattctcaggctacatagttaaagaagttaacctgattcgatgggtgaagccgt  8529900                                <------NtERF2                              <---------DEAR3(1)                             --------->ATERF1(1)                             <------ZmHOX2a(1)                           --------->ALFIN1                        --------->LBD16        <------NtERF2   --------->HSFB2a(2)       --------->LBD16  <---------HSFB2a(2)      --------->LBD16  <---------LBD16                                                         <-----     <---------LBD16   <---------HSFB2a(2)                                                   -------- --->LBD16            <---------LBD16                                               <------ZmHOX2a(1) ---ANAC58      <---------MYB52(1)                         --------->At4g35610    --------->ANAC46<-- ---ANAC58      --------->DOF5.7(2)        <------ZmHOX2a(1)               <---------ICU4   <------ZmHOX2a(1) ---ANAC46 ------------>MYB.PH3(1)      <-----------RAV1(2)<---------At4g35610   <---------LBD16-----   ggtaatcgccggaaaaccgttatctccgggaggaggcgaagcgcaggagatagatggacgatgctgagattgagaattcattaccaggaatcgaggagga  8530000                                                         <------MYB83                                               <---------ZAT2                                               <---------At4g35610                                               --------->ZAT2      --------->ZAT2                                 --------->ANAC58        <------MYB46(1)                                 --------->ANAC58       --------->MYB59                               <------ZmHOX2a(1)      --------->CCA1(2)    --------->LBD16                        <---------ANAC58       --------->At4g35610 --------->At4g35610 <------ZmHOX2a(1)      <---------ANAC46      <---------AGP1       <---------At4g35610 -ZmHOX2a(1)            <---------ANAC58    ---------->DOF2       --------->GLK1(2) ->ALFIN1              <-------TEIL        <---------STY1(1)    <---------At4g35610 ----ZmHOX2a(1)    <---------TOE2(3)       --------->STY1(1)  <-----------RAV1(2) ---->ALFIN1    <---------WOX13(1)  ---------->DOF2----------->ARR10      <---------DEAR3(1)     ----   ggaggatgagaagaagcgattgatgttcgtggaggaagcaaagccctagagctgagatttggtctcagaagctgagccggtgaagaagagagcaactcca  8530100                                                                             <---------O2                                                                             ========================                                                                             --------->O2                                                                         --------->TOE2(3)                                                                 <---------ANAC46          *TSS                                                <---------O2   <---------TGA1a         <------ZmHOX2a(1)                                    <---------bZIP60(1) <---------ANAC46       --------->MYB59                                        --------->bZIP60(1) ----------->GT1    <-------GAMYB                              --------->ANAC55(2)       --------->TOE1(3)   <---------MYB46(3)                          <---------ANAC55(2)    <-----------GT1     --------->AHL20(2) ----->AtLEC2       ---------->DOF2 <---------YAB1            --------->O2   --------->TGA1a   tgcgatggttaggaagagtagagaaagaccacttgattttgattttgttacttaaactataacgacgtcgtataacctcaagtgtcgttaaaaaaaatat  8530200                                                                             --------->HSFB2a(1)                                                                             <---------HSFB2a(1)                                                                   <---------bZIP60(2)                                                                   <---------O2                                                                   <---------ANAC46                                                                   --------->O2                                                                   --------->ANAC55(2)                                                                   <---------ANAC55(1)                                                                   <---------ANAC58                                                                   <---------TGA1a                                                                   <---------ANAC55(2)                                                                   ==============================bZIP_DOF                                                                ----------->TGA1                                                                ----------->HVH21                                                               <-----------HVH21                                                              <---------ANAC55(2)                                                              <---------ANAC58                                                              >>>>>>>>CAMTA3 <---------HSFC1(2)                                                              --------->ANAC55(2)                                                              <---------ANAC58   <---------ANAC46                                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                     <---------ANAC46--------->ALFIN1                                                    <-----------------------TaNAC69(2)              <----------DOF2         <xxxxxxxxxxxxxxxxsmallRNA(s) --------->TGA1a            <---------ANAC58=================================================bZIP_DOF     --------->ZAT18            <---------ANAC58<----------DOF2        <---------ZAT14 <---------ANAC58    <xxxxxxxxxxxxx         <---------WOX13(1)<---------ANAC58        --------->ZAT14----------->STF1--------->HSFB2a(2)        <------------CBF   <---------ANAC58     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   ---------->DOF2       --------->ATHB12    <---------ANAC46 --------->ZAT18 <---------ANAC46 --------->HSFC1(2) ========================bZIP_DOF   <---------DEAR3(1)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   gagaacaagtgattgcctttgctctagtagcttgatggtctgcgaaggcactgtgaagtgtaacgcgtgacgtgttcgatgcttcgggcaaaggcactga  8530300                                                               <---------At5g28300                                                        <---------TOE2(3)                                                  <---------AHL20(2)                                               <---------AHL20(2)                                               --------->AHL20(2)        <---------AHL20(2)                  ---------->DOF2             <---------AHL20(2)        --------->YAB1              <----------ID1                  --------->AHL20(2)   <---------ANAC46           xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               <---       <---------------------WRI1        xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         <---------TOE2(3) xxxxxxxxxsmallRNA(l2)    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <-----------GT1 --------->YAB1     ----   gagagagacagagaagagaacaaagcagtgctacctcttaattgagtattaatttatagaggttttactgtgtataaaaatcatatgaggtattctaaaa  8530400                                                                                    ----------->GT1             --------------->AGL15                                                <-------GAMYB          <-----------GT1                                                    --------->DAG2     <----------DOF2         ---------->DOF2                                --------->DAG2 --------GT1 <---------------AGL15      ----------->GT1                    ---------->DOF2 ----->RVE1(1)         ----------->RAV1(1)        --------->WRKY38(1)--------->MYB52(2)   tacctctctttttttcttcatatagccacagaaaagatggaaatgtaaaatgttgactgcatagtctgcattagttgaaaagggagttgtatattgatat  8530500                 ----------->ARR10     <---------ANAC58                                                                             ---     <---------ANAC58                                                                             <--     <---------ANAC46   --------->At4g35610                         >>>>>>>>>>WRKY26    <-----------GT1   atcatttgggtgagtagcgaagaattggctgaattttttcaaatgaactatttgtttttgaatatagagttgatcaaatatcagtttttttcacaaactt  8530600  Previous    Next  AGI:  At4g14910.1    Description:  imidazoleglycerol-phosphate dehydratase, putative. Identical to Probable imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis Thaliana] (GB:O23346); similar to IGPD, imidazoleglycerol-phosphate dehydratase [Arabidopsis thaliana] (TAIR:AT3G22425.2); similar to imidazoleglycerol phosphate dehydratase [Thlaspi goesingense] (GB:AAC83458.1); contains InterPro domain Imidazole glycerol-phosphate dehydratase; (InterPro:IPR000807) Range:  from: 8528163    to: 8530110    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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