Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->ARR14(2)                                                      <---------ARR11(1)                       --------->TOE2(3)      --------->WRKY38(1)     <---------TOE2(1) --------------->AGL15  ----------->HVH21     <---------TOE1(1) <---------------AGL15  --------->WRKY12                                   ----  <----------ID1      ----------------->AGL1--------->TOE1(3)                                 -------  ----------->HVH21   ----------------->AGL2--------->TOE2(3)                            ----------->GT1 --->DAG2        <---------YAB1   ----------->GT1    <---------GLK1(2)        --------->GLK1(2)  <--- --->DOF2<------ZmHOX2a(1)      ---------->DOF2<---------WRKY18(1)     ----------->GT1<---------AtLEC2   gtatgggacgaggaagaagatgatacctgaatgagaaagtcaataaccttgacccgaatcgttttgaagaaaatggagaaaatcggttgtatggaataaa  8520400                                                                                  --------->At4g35610                                                                              <-----------HVH21                                                                             <---------MYB46(3)                                                --------->ANAC58             <------MYB46(1)                                                --------->ANAC55(1)          <------MYB83                                       <---------TGA1a                      <---------AtMYB61                                       --------->TGA1a                      <---------MYB46(3)                                       ===========================================MYC_MYB                                       <---------O2                        <--------P                            <---------ANAC58    --------->ANAC46          <-------GAMYB              --------->CCA1(2)    <-----------HVH21                     --------->MYB52(2)             --------->ARR11(3)   --------->WOX13(1)                     --------->MYB55(2)       --------->YAB1       <---------ANAC58  <---------ALFIN1           --------->MYB111(2)       --------->ATHB12  <----------DOF2 --------->ANAC46                <---------MYB46(3)      --------->ICU4     ========================bZIP_DOF               <---------AtMYB61      <---------ATHB12------>ZmHOX2a(2)--------->O2                     --------->ALFIN1 ----->ARR11(3)     --------->ARR11(3) =============================================MYC_MYB       --- -->AHL20(2) <---------ARR11(3)<-----------HVH21--------->ANAC58     <---------DEAR3(1)  <-----------GT1 ------ARR11(3)     <---------ARR11(3) <---------bZIP60(2)      *TSS<---------LBD16   <---------ICU4   atcttcgaatgatgagatatatgatctctttggtgtcagtcacatggcacacgctatcaatttagaaaaacgcggtggttggtcaccagaattactactt  8520500                                            --------------->AGL15                                            <---------------AGL15                                            --------->HSFB2a(2)                                           ----------------->AGL1                                           <-----------------AGL3                                           ----------------->AG                                           ==========================================================                                           <-----------------AGL2                                         <-----------GT1                    --------->LBD16   --------->AHL20(1)                --------->ARR14(2)    <---------ARR11(3)                <---------ARR14(2)    <---------AHL20(1)               <---------CCA1(2)      --------->ARR11(3)      --------->KAN4(2)          <------MYB83         --------->LBD16 --------->ARR14(2)          <------MYB46(1)      ----------->GT1 <---------ARR14(2)       <----------DOF2   --------->ARR14(2)         --------->MYB59     <---------LBD16<---------HSFB2a(2)     <---------MYB52(1)    <---------ARR14(2) ------>HSFB2a(2)  --------->ANAC55(2)<---------ICU4         <---------KAN4(1)    <---------MYB52(1)   ctcggtctgatttggtcatatccgtattaagtccggttaatattttccataactggggtttgaacattcggtttctttttttcagttagtccgatttgga  8520600                                                                                --------->AHL20(2)                                                                               <---------AHL20(2)                           <---------AHL20(2)                              --------->AHL20(2)                          --------->AHL20(1)                  <---------MYB52(1)<---------AHL20(2)                          <---------AHL20(2)         --------->ARR11(3)    <---------YAB1                          <---------AHL20(1)         --------->AHL20(1)    <---------AHL20(2)                --------->YAB1                       <---------AHL20(1)   <---------AHL20(1)              --------->AHL20(2)                     <---------ARR11(3)   --------->AHL20(2)      <--              --------->AHL20(1)      <-----------------AG   --------->TOE2(3) --------->YAB1     ---             --------->YAB1--------->AHL20(2)<---------HSFB2a(2)          --------->AHL20(1)      ---        ----------->GT1   --------->AHL20(2) --------->HSFB2a(2)<---------ICU4 --------->AHL20(2) <-- =======================================================MADS_MADS    <---------YAB1          <-------TEIL   gttttgagtatggaaaaataatactgaatttatttgttcaaactgttttggaaaaaatatttcccttaattacgaatataattaaaattttaaaattcat  8520700       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->AGP1     <---------ARR11(3)     <---------AGP1                                                                                --     --------->ARR11(3)                                                                            <-     --------->ARR14(2)                                                                            --     <---------ARR14(2)                                                                --------->MYB46(3)    <---------CCA1(2)            <---------TOE2(3)    <----------DOF2      --------->AtMYB61     ---- -------AHL20(2)                --------->YAB1      <------MYB83           <---------ALFIN1      ==== ------>AHL20(2)               --------->ICU4       <---------DEAR3(2)    --------->MYB46(3)     ---- ------>AHL20(1)     <----------DOF2        <----------DOF2             <---------ALFIN1    --------- -------AHL20(1)   ----------->GT1   ------->TEIL   <------MYB46(1)  --------->PCF2 --------->MYB46(3)   tttattagatcttggttaattcggtttaatgcattaatgaatttcggtttaagtcggttttcggtttttatgtcccaccactatctacaaccgatgatca  8520800          <---------ARR14(2)           ----------->HVH21 <---------CCA1(2)                   --------->O2 ------->TOE2(3)                     --------->ANAC55(2) --------DAG2<-----------GT1         <---------TGA1a ------->TOE1(3)                     --------->TGA1a ---->P --------->LBD16    *TSS      <---------O2                                           ------>ZmHOX2a(1) ==============================================MYC_MYB          <---------CCA1(2)     --------->HSFB2a(1) --->TEIL --------->ARR14(2)         ===========================bZIP_DOF             <-----------ARR10 >YAB1<---------LBD16     --------->YAB1             <----------DOF2               ------>NtERF2  ---   accttatctccgtattcaccacaaacagtcatcactctcacttgacacaaaaactcttttgtctccgtctctctgtctctcatggcgactcttcctctcc  8520900                                                                                                    <                                                                                                    -                                                                                                    -                                                                        <---------ALFIN1          <--                                                                   --------->ANAC58               ---                                                                   --------->ANAC58              <---                                                                   --------->ANAC55(2)          -----                                                                   <---------ANAC55(2)         ------                                                                   --------->ANAC46           <------                                                                 --------->SPL7              --------                                                                 ---------->DOF2            ---------                                                                <---------MYB52(1)          ------->GAMYB                                                               --------->LBD16             --------->MYB46(3)                                                              --------->ANAC55(2)          <---------MYB55(2)                                                              <---------ANAC55(2)          --------->DEAR3(2)                                  <---------CCA1(2)           --------->ANAC46          ------->GAMYB                                <---------CCA1(2)          <---------ALFIN1            <---------MYB52(2)                              <---------DAG2               --------->ANAC46            --------->MYB46(3)          --------->HSFB2a(2) --------->TOE1(3)          <---------ALFIN1        --------->MYB46(3) < --->NtERF2                   --------->TOE2(3)      ------>ZmHOX2a(1)----------->RAV1(1)--------->MYB52(1)   cgactcaaacttctacaatctctctccctaaaccttatctctccaattccttctccttcccactccgtaacgcaacactctcaacaacaacaaaccgccg  8521000         --------->DEAR3(1)         <---------ALFIN1        --------->MYB46(3) <----------DOF2 ---------HSFC1(2)       <---------ZAT2 -------->HSFC1(2)       --------->ZAT2 -------->HSFB2a(1)  --------->YAB1 -------ARR14(2)    <------ZmHOX2a(2)                       ---------->DOF2 ------>ARR14(2)    <---------YAB1                     --------->MYB52(1) ---NtERF2         --------->ARR11(3)              --------->ZAT18 ---->LBD16  --------->LBD16                       <---------ZAT18 --->RAP2.6(2)    <------ZmHOX2a(1)          <---------MYB46(3) ---LBD16--------->AtMYB61               --------->ALFIN1   ========================================bZIP_DOF ->MYB52(1)<---------LBD16            --------->DAG2  --------->ANAC58                            --- >DEAR3(1)--------->MYB52(1)<---------LBD16 <---------AtMYB61                             <---------TGA1a ---------HSFB2a(1)<---------ARR11(3)---------->DOF2  --------->ANAC58                    <---------O2   gaactttctcaccaccggaaggatcatagctcgggcatataaagtggtggtagagcacgacggaaagacgactgaattggaagtcgaaccagacgagacg  8521100                                                                                               <-----                                                                                              -------                                                                                          --------->SPL7                                           --------->ZAT14                               <---------ARR14(2)                                     --------->SPL7             <---------ANAC58         --------->MYB52(1)                                   --------->TOE1(2)            <---------bZIP60(2)      --------->ARR14(2)                             <---------ANAC58                   <---------ANAC58     <---------LBD16       <---------TOE2(3)     <---------ANAC58         <---------MYB46(3)          ----------->HVH21 - ------>GLK1(2)           ----------->HVH21<---------ZAT14 <---------AtLEC2      <-----------HVH21<--   attctatctaaggctcttgactctggccttgacgttccctacgactgcaatctcggtgtttgtatgacttgtccagcgaaactcgtgaccggaacggtgg  8521200                                    <-------MYC2                                    <-------MYC3                                    ------->MYC3                                  ------->TEIL       <---------ANAC46      <-------GAMYB   --------->ANAC46     <---------MYB46(3)     <---------MYB46(3)    --------->ALFIN1       --------->ALFIN1<---------ALFIN1                 <---------WOX13(1) ----MYB46(3)              <---------AtMYB61 --------->ANAC58            <---------YAB1 -->ALFIN1               <---------bZIP60(2) --------->ANAC58  --------->ARR14(2)             ======= --------->DOF2          <---------ANAC46 <---------REM1(2)    <---------ARR14(2)             ------>ZmHOX2a(2) ----ZmHOX2a(2)       --------->ICU4------->MYC2              <---------CCA1(2)        <---------TOE2(3)   atcaaagtggtgggatgctaagtgatgatgtggttgaacgtggctacacgcttctatgtgcttcgtatccaacttctgattgtcacattaagatgatccc  8521300  Previous    Next  AGI:  At4g14880.1    Description:  OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1). Identical to Cysteine synthase (OASA1) [Arabidopsis Thaliana] (GB:P47998;GB:O23343;GB:Q42570;GB:Q94AS7); similar to OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C), cysteine synthase [Arabidopsis thaliana] (TAIR:AT3G59760.1); similar to OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C), cysteine synthase [Arabidopsis thaliana] (TAIR:AT3G59760.3); similar to Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase) (OAS-TL) (OAS-TL4) (GB:O23733); contains InterPro domain Cysteine synthase K/M; (InterPro:IPR005856); contains InterPro domain Pyridoxal phosphate-de Range:  from: 8517955    to: 8520464    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g14890.1    Description:  ferredoxin family protein. similar to ATFD3 (FERREDOXIN 3), electron carrier [Arabidopsis thaliana] (TAIR:AT2G27510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71173.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69765.1); contains InterPro domain Ferredoxin [2Fe-2S], plant; (InterPro:IPR010241); contains InterPro domain Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); contains InterPro domain Ferredoxin; (InterPro:IPR001041) Range:  from: 8520827    to: 8521451    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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