Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --           --------->YAB1                                                                         <--       --------------->AGL15                                                                    <----       <---------------AGL15                                                                    -----       --------->LBD16                                                                      ---------      <---------HSFB2a(2)                                                                   <--------      --------->HSFB2a(2)                                     <---------WOX13(1)      <-----------ARR10     <---------LBD16                                        --------->ATHB12          --------->ARR14(2) <---------MYB52(1)        ------->GAMYB         <---------ANAC58                     <---------ARR14(2) -----ARR14(2)            <---------LBD16        <---------ANAC46            <-----------GT1<-------- ---->ARR14(2)--------->YAB1--------->LBD16      <---------ANAC58 --------->ZAT6      --------->GLK1(2)   tccgttttcccgataatagtcattctcaaccgggactggttcagtctccttgcttctattactcattgacactactgattcaccatcaaatctgtgcaga  8513300                                                    --------->YAB1 ------->YAB1                                       <---------ICU4 -----TEIL                                         <---------YAB1 -----ARR14(2)                                   --------->YAB1 ---->ARR14(2)  --------->AHL20(2)       <----------DOF2                                            < >ZAT14   <---------WOX13(1)            <---------ANAC58         <---------ICU4                     - -ZAT14 --------->ATHB12                <---------ANAC58         --------->YAB1    --------->YAB1  <- -ZAT18<---------YAB1                <---------WOX13(1)         <-------TEIL      <---------ATHB12 ==   ttcataaatgtgattgaatcaaataacataacttaactaattgctttgcagttataatcacatatattcattactctattcccaataacaaaacaaaatc  8513400                           <---------ZAT14                                                ===========        ---------->DOF2    --------->ZAT14                  --------->YAB1                <------ZmHOX2a(1)  <---------YAB1          --------->AtLEC2                 <---------YAB1               --------->LBD16 ---------ICU4   ------>ZmHOX2a(1)                     --------->ARR11(3)              <---------LBD16 -------->YAB1   --------->HSFB2a(2)                  --------->YAB1                   <-----------RAV1(2) -----ZmHOX2a(2) <---------HSFB2a(2)            <---------ZAT6           <---------AHL20(2)   ------- =======================HOX2a_HOX2a             ----------->GT1     <---------YAB1 <-----------GT1 <-   gatcatgactcaaagtttcctagaatcaatgcagagaaacctatacagaagtgtaaacatattgatagttcttaatgaattgaatttacccaggagaatt  8513500     <---------CCA1(2)      --------->At4g35610                  --------->ANAC58    ------>MYB83  --------->ARR14(2)                             --------->ANAC46    <------ZmHOX2a(1)    ------>MYB46(1)         <---------At4g35610   ------>ZmHOX2a(1)           --------->ANAC58  <---------MYB59 <---------ARR14(2)             --------->TOE1(2)            --------->ANAC58 ====================HOX2a_HOX2a                 --------->TOE2(2)     --------->AHL20(2) -->GLK1(2)      <---------CCA1(2)       --------->TOE1(3)       --------->ANAC58---------->DOF2 ----------GT1------>ZmHOX2a(2)          --------->TOE2(3)>>>>>>>>>GATA-1   ---------->DOF2   ttgacctatctcttgatccatatccatcgaagcagaccaaaaaccctaattcctgcgatagataaacacccaaataaacaaagcaaaggatgaattctaa  8513600                                                                                     <----------DOF2                                                                                   ------->TEIL                          --------->ANAC58                                     <-------TEIL                          --------->ANAC46                   --------->HSFB2a(2)--------->ANAC58                          --------->ANAC58                   <---------HSFB2a(2)--------->ANAC58                  --------->MYB46(3)                        <---------LBD16   --------->CCA1(2)               <----------ID1      ---------->DOF2    <---------HSFC1(2)      --------->ARR14(1)            <---------TOE2(3)    <---------AHL20(2)   <---------HSFB2a(1)    <---------ARR14(2)            <---------TOE1(3)    --------->AHL20(2)   --------->HSFC1(2)     --------->ARR11(1)        --------->YAB1  ----------->RAV1(1)           --------->HSFB2a(1)    --------->ARR14(2)  --------->YAB1  <---------MYB52(2)          --------->ATHB12           ---------->DOF2   tctataacaatgttaagggaacaaacccacacaaattaaaagttaagttgattagaaatttctccagaatgcagataaagatacgaactttggagagtca  8513700                       --------->REM1(1)                                    <----------DOF2                      *TSS   --------->REM1(1)                            ------>ZmHOX2a(1)                  <---------YAB1                                          ================HOX2a_HOX2a              ------>ZmHOX2a(2)                                       <---------ARR14(2)             <------ZmHOX2a(2)                                        <-----------GT1  <---------GLK1(2)            --------->ARR14(2)                                        --------->ARR14(2)            <---------ARR11(3)              <---------AHL20(2)        --------->ARR11(3)       ------            <---------ARR14(2)              --------->AHL20(2) <---------ANAC46    ==================            --------->ARR11(3)----------->RAV1(1)           <---------MYB52(1)     <------ZmHOX2a(2)   agaacagagtagccgatcttatgcttcaactacaacagattacaaatttatcaaactcattcgtttcttatatatcctcttttcgatcagattagtccta  8513800                                                                                                   --                                                                                                   --                                                       <---------YAB1      <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                      *TSS         <---------YAB1                ----       --------->ALFIN1   <----------DOF2         <---------At4g35610    <-----------GT1         ---- >ZmHOX2a(1)         <-----------GT1              --------->At4g35610   --------->KAN4(2)       ----- =HOX2a_HOX2a--------->MYB52(1)              <---------REM1(2)   <-----------GT1          <<<<<<<<<TBF1   caaacagaggtggaataacagttatacccttttagtttgtttttgtttacacagatgaagattgaaattacgattataccgttcaatgtttcttcttcac  8513900                                                              <---------TGA1a                                                             ------->TEIL                                                            <---------ALFIN1                                                          --------->ANAC58                                                          --------->ANAC58                                                         --------->SPL7                                                         --------->PCF2                                                        ------>NtERF2                                                       <---------SPL7                                                       ----------->HVH21                                                     <---------LBD16                           --------->DEAR3(1)        ------>NtERF2                          <---------LBD16            --------->LBD16                         --------->MYB52(1)          <---------At4g35610                            <    ---------->DOF2    <------ZmHOX2a(2)        ------>ZmHOX2a(1)                                   < ---->MYB83----------->HVH21--------->LBD16    <---------ALFIN1                                 ----- ---->MYB46(1)         ================================HOX2a_HOX2a                          ------>NtERF2 ----->DEAR3(1)       <-----------HVH21   ------->TEIL --------->DEAR3(1)                   --------- ----->DREB2C(2)<----------DOF2   --------->MYB52(2) --------->At4g35610                   --------->ANAC46 ---->DEAR3(2) <---------DAG2   <---------MYB52(1) <---------LBD16                        <---------LBD16   cgacttgaaagctatgacctttccgatcaccggcgttagttatgagcctcctctccgcggacgcacttgggttacttctcaagaatgcaatctccgcgag  8514000                                                                <---------MYB52(1)                                  --------->TOE2(3)        --------->DEAR3(1)                                 ----------->GT1           <---------ALFIN1                        --------->ANAC55(1)               --------->ZAT2                        --------->ANAC58                --------->DEAR3(1)                        --------->ANAC55(2)             <---------ALFIN1                        --------->ANAC46                --------->AtMYB61               <---------ANAC46--------->GLK1(2)       --------->MYB46(3)    <---------ANAC58    --------->ANAC58             --------->ANAC46    <---------ANAC58  <---------DOF5.7(2)            <---------ALFIN1 ---------ANAC58    --------->DOF5.7(2)   --------->TOE1(2)--------->AtMYB61 ---------ANAC58 <------NtERF2<---------GLK1(2)      --------->AtMYB61 ---->GLK1(1) <------NtERF2 --------->ANAC58        --------->MYB46(3)<---------HSFB2a(2) >LBD16    <-----------HVH21--------->ANAC58      <-----------GT1     --------->HSFB2a(2)   ------->TEIL   ttccatgcgtttgggtcgcgtcgttcacgcaagaatcgtcaaaaccctcgattcaccaccacctccgtttctcgcgaactatctcatcaacatgtactca  8514100           --------->LBD16                                <---------CCA1(2)          <---------HSFB2a(2)                         ----------------------->TaNAC69(2)          --------->HSFB2a(2)                       <---------HSFC1(2)          --------->ANAC46                          --------->HSFC1(2)         <---------LBD16                        --------->ANAC58        ------>MYB46(1)                         --------->ANAC46                   --------->ARR14(2)        ------>MYB83  <---------ALFIN1      ------>ZmHOX2a(1)                    --------->LBD16 <---      --------->AtMYB61                   ----------->RAV1(2)<---------ANAC46  <---------LBD16  -----     --------->MYB46(3)           ------>NtERF2 --------->ANAC58     <---------ZAT14         --------   aaactcgaccatccggaatcagcccgactcgttctccgactcactcctgcacgaaacgtcgtctcttggacttcacttatctccggacttgctcagaacg  8514200  Previous    Next  AGI:  At4g14840.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71183.1) Range:  from: 8511482    to: 8513722    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g14850.1    Description:  LOI1 (LOVASTATIN INSENSITIVE 1). similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G09950.1); similar to hypothetical protein OsJ_033061 [Oryza sativa (japonica cultivar-group)] (GB:EAZ18852.1); similar to PPR986-12, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94388.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71181.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 8513854    to: 8516355    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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