Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------      --------->AHL20(2)                                       --------->TOE2(3)            <--------      <---------AHL20(2)                                      ----------->GT1               <--------      <---------ATHB51    --------->ANAC55(2)             <---------AHL20(2)      --------->HSFB2a(1)  <---------YAB1<---------YAB1                         --------->YAB1            <---------TOE1(3) --------YAB1 <----------DOF2                       --------->YAB1               <---------TOE2(2) ---->ICU4    <---------DAG2           ---------->DOF2<---------YAB1             <---------TOE1(2)   gattataaataattcacttttattgtttacatatcatataaaaaagtctaaatttcataataaatcgtcaatacttatattcgaaggtttttgtgcgtag  8510500                                                                                              -------                                                                                            ---------                                                                    --------->ARR11(3)     <---------TOE2(3)                                                                    --------->AHL20(1)    <---------ICU4                       --------->AtLEC2                             <---------ARR11(3) --------->YAB1   --------->ICU4  <---------YAB1                               ---------->DOF2       --------->AHL20(2)   <---------YAB1--------->KAN4(1)                             <------ZmHOX2a(1)      <---------AHL20(2) -ANAC58        <---------KAN4(2)                            --------->MYB59      --------->ICU4 ---- -ANAC46     --------->ZAT18                       --------->YAB1 ----------->ARR10  --------->AHL20(2) -ANAC58    ----------->GT1             <---------YAB1 ---------->DOF2            --------->AHL20(2)   aagtaactattgaagggcaatattcttgcaaatacaacgattatgtttaagaaacataaaagttaggaaagatattgtttagaaatatttaataatgtaa  8510600                       --------->TOE2(3)                      <---------ANAC58                      --------->ANAC55(2)                      <---------ANAC58                      --------->ANAC58                      <---------ANAC55(1)                      <---------ANAC55(2)            <---------GLK1(1)      ----------->GT1 --------->ANAC58               --------->GLK1(1)   --------->MYB52(1) <---------ANAC46          --------->ALFIN1 -->AHL20(2)         --------->MYB59  <---------HSFB2a(2)                        ----------->GT1 -->GT1          <---------------AtSPL8       --------->ALFIN1             <---------------AtSPL8 ----->ICU4    ---------->DOF2        --------->HSFB2a(2)           <---------TOE2(3)   <-----------GT1   atattaaacggataaataaaagttacgtaaatgtttttttttggaagggaggggggtttccctatgttttgacgaaaaatgtacagtttaaaacctttct  8510700            <---------ATERF1(1)            <------MYB46(1)            <------MYB83           <---------DEAR3(1)          <--------P         <-------GAMYB         <---------ANAC58         <---------ANAC58                                                         --------->YAB1        --------->MYB55(2)                                                        --------->ATHB12        --------->ATHB12                                                          <---------ICU4        <---------MYB46(3)                                                        -------->ATHB1        <------MYB46(1)                                                          <---------ATHB12        <------MYB83       <---------ZAT14                                       <---------YAB1        --------->MYB52(2) --------->ZAT14              <-----------GT1     <---------ANAC55(2)       <---------AtMYB61 --------->ZAT2       ------>MYB83                  --------->ANAC55(2)      <---------MYB52(1) --------->At4g35610  ------>MYB46(1)          <---------ICU4     <-------GAMYB       <---------ZAT2     <---------MYB59            --------->YAB1    <---------MYB46(3)   <---------At4g35610------->GAMYB             <---------ATHB12    <-----------RAV1(1) <---------TOE1(2)--------->WOX13(1)     --------->TOE2(3)--------->ICU4   ctcagtctgttggttggctccattcgcagcttactgttttcgtcaaccaaattttgtttatccatttcttaaatcatcacttaatcattgcctagttcta  8510800                                                                 <---------YAB1                                                               --------->YAB1                                                              --------->ICU4                                                          ------------>CBF                <---------DAG2                       <<<<<<<<<SARD1                   --------->HSFB2a(2)     --------->DAG2                <---------GLK1(1)                       <---------HSFB2a(2)    --------->DAG2                --------->GLK1(1)----------->GT1    <----------DOF2           ---------->DOF2           <------ZmHOX2a(2)---------->DOF2        <---------ANAC58        --------->AtMYB61        <  ---------->DOF2      <<<<<<<<<CBP60g             <---------ANAC58     --------->ANAC46  <----------DOF2   atcccaaagttggatcagaaatccaaatttcaaagtcgttatacagagccgtagctttctggcaattttgattcccaccaaaaaggtgatcactttatat  8510900                                                                                                    -                             ---------->ID1                                                      <---                     <---------AHL20(2)                                                        ------                     --------->AHL20(2)                 --------->ANAC46              --------->MYB46(3)          <----------DOF2   <-----------GT1             --------->ANAC58        <-----------ARR10----     ------>ZmHOX2a(1)<---------AHL20(2)                --------->ANAC58        --------->ARR14(2)  -   *TSS  <---------ICU4  <---------ICU4               <---------ALFIN1          <---------ARR14(2)  - ---------GLK1(2) ------>ZmHOX2a(1)           --------->ZAT6      ---------->DOF2    --------->ANAC46   tagattcctcatcttttctcctattaattttgacccattcgcttcttatcactctcacacccaaaaaaaaaagacccatgaaaatccacccattacccag  8511000                                                                                               ------                                                                                               <-----                                                            <---------HSFC1(2)          <---------ANAC58                                                            <---------HSFB2a(1)--------->ARR11(3)                                                    --------->LBD16            <---------ARR11(3)  <-                                                   --------->ANAC46            <---------ARR14(2)  --                                                   --------->LBD16        ----------->RAV1(1)  >>>>>>                                                  <---------LBD16   <---------ATERF1(1) <---------ANAC58                                      ----------->HVH21     --------->HSFC1(2)<---------CCA1(2)<----- ---------->GT1                      ------>ZmHOX2a(2)      --------->At4g35610--------->ARR14(2)  <- ------ARR14(2)            --------->ANAC58     <---------ARR14(2)<---------MYB52(1)  <---------At4g35610 --->LBD16    --------->GLK1(2)      --------->DEAR3(2)     --------->ZAT2<---------ALFIN1     ------ ----->ARR14(2)            --------->ANAC58     --------->GLK1(2)<-----------HVH21    --------->At4g35610 -------->ANAC58      --------->WOX13(1)    --------->LBD16 --------->HSFB2a(1)<---------ARR11(1)  -- -------->ANAC58     ------>ZmHOX2a(2)<---------ETT(1)---------->DOF2--------->ATERF1(1)<---------ANAC46   aaacgaaaataacaacaatctgatccatcacgctcgtgatccgacccgagaacccggaaagaagctccgtcgtctcccacatatcttcagccgtgttcta  8511100                              --------->At4g35610                              <-------GAMYB                             <---------MYB46(3)                         --------->ALFIN1                       >>>>>>>>>>AtbZIP1                       <---------ANAC46                       <---------bZIP60(1)                       =======================================bZIP_DOF                       <---------O2                       --------->TGA1a                       <---------bZIP60(2)                       ===============MYC_MYB                       <---------ANAC58                                   <---------TGA1a                       --------->O2                                <---------ARR14(2)  ------>NtERF2        <---------ANAC58                         <---------ANAC46              ------- --->HSFC1(1)          <---------TGA1a                          <------NtERF2            <---------AtMYB61 ----HSFC1(1)          --------->bZIP60(1)                     <---------LBD16          <------ZmHOX2a(1) --------At4g35610   ------>NtERF2                   <-----------RAV1(2)  <---------O2--------->ALFIN1 ------->At4g35610   <---------TGA2(2)             =================================bZIP_DOF <------- >ZML2              --------->WRKY12               <----------DOF2 --------->ARR14(2)<------ZmHOX2a(1) ----HSFB2a(2)      ----------->TGA1          --------->RAP2.6(3)--------->LBD16   --------->ALFIN1 --------ZAT2       ----------->HVH21       --------->ICU4  <-----------HVH21     <------ZmHOX2a(1) < --->HSFB2a(2)    --------->At4g35610       <---------YAB1 --------->MYB52(2)   --------->ALFIN1    < ------->ZAT2  <---------At4g35610        --------->YAB1  <-------TEIL  --------->MYB52(1)  ---------   gagctgcccttgaagtcagacgctgacgtggctgttgaagagagtcatgactgcttcaggttcgtcgcggaaacagacgggggaggaggaggaggtgtga  8511200                                                                                                   --                                                                                                 <---                                                                                                 <---                                                                                                 <---                                      <---------ANAC58                                           <---                                      <---------ANAC58                                           ====                                    --------->GLK1(2)                         <----------DOF2    <---                                   <---------GLK1(2)                          =======================                           ----------->HVH21                                 <---------ANAC46    <---                           xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------CCA1(2)                  <--- -->ALFIN1               <---------ANAC58               <-------TEIL         <---------ANAC58    ---- ----HVH21               <---------ANAC58           <---------ATHB12         <---------ANAC58    ---- ---------ANAC58      ------>ZmHOX2a(1)           --------->MYB52(1)      ---------->ID1      ------- ---------ANAC58    ----------->RAV1(2)         --------->MYB46(3)      <-----------RAV1(1)  ======== >ALFIN1        <-------TEIL       <---------ARR11(3)<---------MYB46(3) --------->MYB52(2)   <-------   gggcttacatggttgagattcatcctggtgtgaccaagattcttgtgagaaccaatggttcatcgtctcttggtttgtcgcttgatgagcttgagcttga  8511300    <---------ANAC46    <---------ANAC58    <---------ANAC58 --------->ALFIN1 ------->ALFIN1                                            <------NtERF2 ------ANAC58                                             ------>NtERF2 ------ANAC58                                            <---------DEAR3(1) ------ANAC46                                            --------->DEAR3(1) ------ANAC55(1)                                      ----------->HVH21 =======================MYC_MYB               --------->LBD16 ------bZIP60(2)                             <---------ANAC58 ======bZIP_DOF                              <---------ANAC46 ------TGA1a      --------->LBD16            <---------ANAC58 ------O2        --------->HSFB2a(2)       <---------At5g28300            <---------WOX13(1) ----->O2       <---------LBD16            <---------DOF5.7(2)           <---------ANAC58 ----->TGA1a   -------->P                --------->DOF5.7(2)<---------DEAR3(1) ---->HVH21--------->ANAC46         <---------ZAT2<---------ANAC58       <---------ANAC58 ======bZIP_DOF--------->MYB52(1)   <---------At4g35610 --------->ATERF1(1) ---DOF2 <-----------RAV1(2)        --------->ZAT2<---------ANAC58      --------->ATHB12 <---------YAB1   cgtgtggcgtttcaggctaccggaatcaactaggcctgagctcgttaccgtggattgcgacggcgatggagaattgattgtcactgtgcctaagattgaa  8511400  Previous    Next  AGI:  At4g14830.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71186.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978) Range:  from: 8510903    to: 8511923    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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