Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->ARR14(2)        <---------ARR14(2)     --------------->AGL15     <---------------AGL15    ----------------->AGL2    <-----------------AGL2    <-----------------AGL3    ----------------->AGL3    <-----------------AGL1              <---------AHL20(2)    ----------------->AGL1             --------->AHL20(1)    ----------------->AG      <----------ID1                                                 --------    <-----------------AG   XXXXXXXXXXXXXXXXXXXX>MIR1886.1                                   <--------  <-----------GT1         ---------->DOF2                                                   ---------  <---------WRKY18(1)   <---------YAB1 <---------AHL20(1)                                 --------->LBD16 ---------WOX13(1)    --------->At4g35610                                                --------->HSFB2a(2) ------>ATHB12        <---------At4g35610               ---------->DOF2                  <---------HSFB2a(2) ------YAB1          <---------YAB1    <---------AHL20(2)            ---------->DOF2    <---------LBD16 -----DOF2        --------->GLK1(2)    --------->AHL20(2) ----------->GT1     <----------DOF2<-------   tgattgaccatatttgggaaattctgatgaaagaaacaaaataaaatttgtcaacatcgaaagtaaaaaaaaaaagaatgctttgttttgtccggaaatg  8453600                                                  <---------WRKY18(1)                                             <------ZmHOX2a(2)                                         <-------TEIL                                        --------->CCA1(2)                                        --------->ARR14(1)                                       ----                                       <---------ARR14(2)                 --------->ANAC58     <-----                                       --------->ARR11(1)                 --------->ANAC58     ------                                       <---------ARR11(3)        --------->GLK1(2)           <-------                                       --------->ARR14(2)      --------->HSFB2a(1)         <---------ARR14(2) ->GLK1(1)                           --------->ANAC58          <---------HSFB2a(1)         --------->ARR14(2) -ARR14(2)                           --------->ANAC58          <---------HSFC1(2)         --------->GLK1(1) >ARR14(2)                           ----------->ARR10         --------->HSFC1(2)<------ZmHOX2a(1) --GLK1(1)      ---------->DOF2 <----------ID1   ----------->HVH21       --------->TOE1(2)<---------GLK1(1)   ctctgtttttatctgaagaaaagacttacagagtgagacaagatacgatccatgaccatttgagaagtttctgaacaagcgaaggagaatgggtttccgg  8453700                               ------>NtERF2                              --------->DEAR3(1)                             --------->DEAR4(2)                             --------->RAP2.3(1)                             <------NtERF2                             --------->ATERF1(1)                            <---------ATERF1(1)                            <---------RAP2.3(1)                            ------>NtERF2                           <---------DEAR3(1)                           --------->DEAR3(1)                          --------->ATERF1(1)                         ------>NtERF2                         <-----------HVH21                         <---------ATERF1(1)                        --------->DEAR3(1)                        <---------DEAR3(1)                       <------NtERF2                       --------->ATERF1(1)                       --------->RAP2.3(1)                      ------>NtERF2                   --------->REM1(2)                                                                -                   <-----------HVH21                                                                <                  --------->ALFIN1                                                                  -                  <-----------RAV1(1)                                                               <                 --------->LBD16                                                                    <                <---------ANAC46                                                                  ---                <---------ANAC58                                                                  <--                --------->ANAC55(2)                                                              <---       --------->LBD16<---------RAP2.3(1)                           <<<<<<<<<TBF1        --------->ARR14(2)     <---------LBD16 <---------DEAR3(1)            <------------------------ANAC81       <-----------ARR10 ------->HVH21  <---------ANAC58     ----------->RAV1(1)         <<<<<<<<<TBF1           <---------ARR14(2) ----At4g35610  <---------ANAC55(2) --------->ANAC46       <<<<<<<<<TBF1                 --------->GLK1(2) --->LBD16      <---------ANAC55(1) ----------->HVH21   <<<<<<<<<TBF1                   <---------GLK1(2) --LBD16<---------MYB52(1)<------NtERF2     <------ZmHOX2a(1) <<<<<<<<<TBF1          <------ZmHOX2a(1)   tgacaagtccggtgtcttccgtgtcgccgtcgccgtctacgacagaggagatgggttcttcttcttcttcttcttcggttttggagaggagaatctgagg  8453800      <---------ZAT6    <------MYB46(1)    <------MYB83   --------->ALFIN1   <---------AtMYB61   <---------DEAR3(1)                                                                          ------ <------MYB46(1)                                                                          <---------ORA47(1) <------MYB83                                                                           <---------MYB46(3) <---------ANAC58                                                                       <---------SPL7 <---------ANAC46                                                                       --------->ETT(2) <---------ANAC58                     --------->ANAC58                                  <---------ETT(2) -------->MYB55(2)                    --------->ANAC58                                 --------->ALFIN1 ------MYB83                       <---------ARR14(2)                              <---------LBD16<-- -------->MYB111(1)                --------->ARR14(2)                            <---------ARR14(2) ---------MYB46(3)             <---------At4g35610                               --------->ARR14(2) ------MYB46(1)                --------->At4g35610                         <---------AtMYB61 -------- ------>ALFIN1             <---------HSFB2a(2)                     <---------MYB46(3) <---------MYB52(1) ------P                   --------->HSFB2a(2)                     <---------DEAR3(2)--------->LBD16- ----GAMYB     <---------ANAC46<---------ZAT14      --------->At4g35610    --------->ALFIN1 ---------   gttgggtggtgttagagccttggagacttcgagagcagagacgctccatgaacgagctaaaaactccatcggttcgagtggtgtttccggtggacggtaa  8453900     <---------DEAR3(2)    --------->ETT(1)  --------->ARR14(2)  <-----------HVH21  <---------ARR14(2)                                                                --------->CCA1(2) ---->DOF2                                                                         --------->ARR11(3) -------LBD16       --------->ARR14(2)        ---------->DOF2          --------->ARR11(3)           - ->At5g28300     --------->ETT(1)         ---------->DOF2              <---------ARR11(3)          -- -------->LBD16<-----------HVH21        <---------YAB1   <---------ZAT14           <---------ARR11(3) -->GT1 --------->GLK1(1)       <-----------GT1          --------->ZAT14--------->CCA1(2)          <-   accgggtcgggtctccatgtcggaaccatgagtttttccattttgaaagaaagagagagtgaagagagagagagatatagagagagatatatagagagag  8454000                                                                           ------->TEIL                                                                <---------ANAC55(2)                                                                --------->O2<---------ZAT2                                                                --------->ANAC55(2)                                                                --------->TGA1a                                                                <---------O2<---------At4g35610                <---------YAB1                    ========================bZIP_DOF     --------->YAB1 -------->CCA1(2)                                 <----------DOF2          --------->GLK1(2) ------->ARR11(3)        ----------->HVH21        <-----------TBP ----------->HVH21<----------DOF2 --------ARR11(3)      *TSS        ------------>CBF             ==============================bZIP_DOF   agatatagagagagagttttgatggaagtgaaaggttgtcaatggggatgcgatttatagaatgacaagtgacaacgaagctgttcttttcatcactctc  8454100                                                                                                 <---                             <----------DOF2                                                     ----                             <---------DAG2                                                   <------                        <---------ANAC58                                                     <-------                        <---------ANAC58                                                     --------                      <-----------GT1                                                        --------                <---------ANAC58                                                           --------->YAB1         --------->At4g35610<---------ANAC58                                       ----------->GT1         <---------At4g35610<---------ANAC58   <----------DOF2             XXXXXXXXXXXXXXXXXXXX>MIR1888  <----------DOF2 <---------MYB52(1)     --------->ZAT14                 --------->At4g35610 <-------  <---------DAG2<---------ANAC58 <-----------GT1                         ----------->GT1 --------->AHL20(2)   tctgctttttcagctcttccgttttttcttgctttttccctactactctctttctctctctctaaatgaaaaataagctaaaattttgtgaaaaaataat  8454200                                                     --------------->AGL15                                                     <---------------AGL15                                                    <-----------------AGL2                                                    <-----------------AGL1                                              <---------CCA1(1)                ----------->GT1                                              <---------RVE1(1)               --------->MYB59      ------->TEIL                           --------->ARR14(2)               <---------TOE1(3) ------AHL20(2)                              <---------ARR14(2)               <---------TOE2(3) ----->AHL20(2)                            ----------->GT1               <---------AHL20(2) ---ICU4               ----------->GT1   <---------LBD16                 --------->AHL20(2) --AHL20(2)        <---------YAB1       --------->CCA1(2)             <---------AHL20(1) ->ICU4          <---------AHL20(2)    <---------ARR14(2)             <---------ARR11(3)      ------- ->AHL20(2)     <---------AHL20(2)     --------->ARR14(2)             --------->AHL20(1)      <------ --ATHB51<----------DOF2       <-----------GT1--------->GLK1(1)  <---------ATHB12       ----------->GT1   taaaaatgaagctttttttttatttttgtaaattttccaaatatacggatattttctgaaattggccatcaatatttttttaggttaaacgagtaattaa  8454300                     <----------DOF2                                       <---------AHL20(2)           --------->ANAC46                <---------HSFC1(1)             <---------YAB1     --------->AHL20(2)     <---------ANAC46                           --------->AHL20(2)          <- -->AHL20(2)         <---------DAG2        --------->HSFB2a(2)       <---------ARR11(3)           --- ---AHL20(2)      <-----------GT1          <---------HSFB2a(2)       --------->ARR11(3)  ----------->GT1   aaaaaaaaaaaatacacaattcacttttttgtgtgaattgatattccagaaggaattggagaacatttcaagatttattatttgaacgatttagttatat  8454400          <----------DOF2                      <---------TOE1(3)       --------->ARR11(3)                     <-----------GT1       <---------AHL20(1)                     <---------DOF5.7(2)       --------->AHL20(1)                ----------->GT1       <---------ARR11(3)              ---------->DOF2      --------->RVE1(1)         <---------TOE2(3)      --------->CCA1(1)       <---------AHL20(2)  --------->AHL20(2)         --------->AHL20(2)<---------TOE2(3)                               ------ --------TOE2(3)    <----------ID1  ----------->GT1     <----------DOF2---------->ID1        <------ZmHOX2a(1) ------->DOF2     ---------->DOF2<-----------RAV1(1)  <-----------------AGL1   <----------DOF2<------   taaagaaaatatctttacttaaaagacaaaattttatgttgtaaagtttaacgttgttcttttttggcaacttgttgtattctttttggaatacaggata  8454500  Previous    Next  AGI:  At4g14740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71221.1); contains InterPro domain Pleckstrin-like, plant (InterPro:IPR013666); contains InterPro domain Protein of unknown function DUF828, plant (InterPro:IPR008546) Range:  from: 8450284    to: 8454023    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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