Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <------NtERF2                                               <---------RAP2.6(3)                                               ------>NtERF2                                              --------->ANAC58                                              <---------ATERF1(2)                                              --------->ANAC46                                              --------->RAP2.3(2)                                              --------->ATERF1(2)                                              --------->RAP2.6(2)                                              --------->ANAC58                                              --------->RAP2.3(3)                                              --------->RRTF1(2)                                              --------->RRTF1(3)                                              --------->DREB2C(2)                                              ------->GAMYB                                              --------->DEAR3(1)                                             --------->RAP2.3(1)                                             --------->MYB46(3)                                             --------->ERF1                                            <---------ZAT2                                            <---------ATERF1(1)                                            <---------At4g35610                                            --------->At4g35610                                          <-----------RAV1(2)                                        <-----------HVH21                                      ------->MYC4                                      ------->MYC2                                      ------->MYC3                                      <-------MYC3                                      <-------MYC2                                      <-------MYC4                                      -------->ABF1                                     <---------TGA1a                                     --------->ANAC55(2)                                     <---------ANAC55(2)                                     --------->TGA1a                                     =================MYC_MYB                      =========================bZIP_DOF                      <----------DOF2<--------ABF1                     ---------->DOF2                    <---------ZAT18  --------->O2              <----------ID1                 <---------ATERF1(1) <---------O2              ----------->GT1                <---------DEAR3(1)   =============================================bZIP_DOF               <---------ANAC58      =================================bZIP_DOF         --------->ANAC46  ------>ZmHOX2a(1)--------->ZAT2 ---------->DOF2                       <--- --->RAV1(2)   <---------ANAC58    <---------ALFIN1      --------->LBD16--------->DAG2 >>>>>>>>>TBF1   agatttattccacgaaggcctgcgcattcctgtttcgacacgtgtcagccgccattctccagagagcgaaaaaaaaagctcggagagaagaagaatagag  8434700                                                       -------->P                                                  <---------ARR14(3)                                                  <-----------ARR10                                                  <---------ARR14(2)                                                  --------->ARR14(2)                                                  <---------ARR11(3)                                                  --------->ARR11(3)                                                  --------->ARR14(3)                                                 --------->HSFB2a(1)                                                 <---------HSFB2a(1)                                                ----------->ARR10                                              <------ZmHOX2a(1)                                              =============HOX2a_HOX2a                                          <---------MYB52(1)                                         --------->LBD16                                        --------->ANAC55(2)                                        <---------ANAC58                                        <---------ANAC55(2)                      <---------GLK1(2) <---------ANAC58--------->DEAR3(2)       --------->AHL20(2)                  <-----------GT1    --------->ARR14(2)------>MYB83         --------->LBD16               --------------->AtSPL8<---------ARR14(2)------>MYB46(1)      ----------->GT1      <---------AHL20(2)        --------->At4g35610 ------>ZmHOX2a(2)      ----------->GT1      --------->AHL20(2)        <---------At4g35610<------ZmHOX2a(2)  --------->YAB1              >>> ------GLK1(2) <---------------AtSPL3--------->GLK1(2)------>ZmHOX2a(1)   <---------LBD16 ---------->DOF2   aatttcaaaaaattgactatgtacgattcttctcagcaaaatccgtgaggaagatcctaccgtcgaagacaataagaccggaaaaaaatggagaaaggaa  8434800                             --------->LBD16                            <---------RAP2.6(2)                           <---------LBD16                   <---------TOE2(3)                     --------->ARR11(3)        --------->HSFC1(2)             <---------------AGL15                       <---------ARR11(3)        <---------HSFC1(2)             --------------->AGL15             --------->At4g35610            <-----------RAV1(2)            <-----------------AGL1             <---------At4g35610          <-----------HVH21     <-----------GT1 <------ZmHOX2a(1)         <---------ZAT2             <---------HSFC1(2) >>>>>>>>>TBF1 <----------DOF2<------NtERF2    --------->ZAT2             --------->HSFC1(2) >>>>>>TBF1 <-----------------AGL2     --------->HSFB2a(2)      <---------ZAT14 <---------At4g35610   gaagaagaaacctttctctttgaggaatttgcggcaatcttcgcgagtaagctgagaaatgtcttcttcagtgagaagcttcagaggcttctcaagtata  8434900                                                                                                 <---                                                                                                 ----                                           ------>NtERF2                                         ----                                           --------->LBD16             ==========================bZIP_DOF                                         <---------LBD16               <---------TGA1a           <---                                       --------->ARR14(2)              --------->O2              ----                                       <---------ARR14(2)              <---------O2        --------->YAB1                                       --------->GLK1(2)        <---------GLK1(1)          --------->ANAC55(2)                                      <---------GLK1(2)         --------->GLK1(1)       <---------ARR14(2)                                      --------->ARR14(2)   <---------LBD16           <---------ANAC58                                 <-----------HVH21--------->RAP2.6(3)  --------->TGA1a<----------DOF2                          --------->ARR14(2)     --------->MYB52(1) ----------->HVH21<---------ANAC58                          <---------ARR14(2)------>NtERF2 --------->MYB52(1)         <---------ANAC46                   --------->REM1(1)  <---------ARR14(2) <---------ALFIN1     <---------ZAT14   <----                 ------>ZmHOX2a(1)   --------->At4g35610----------->HVH21     --------->ZAT18   -----      --------->LBD16 <-------TEIL   <---------At4g35610<------NtERF2------>NtERF2--------->ALFIN1     --------->DEAR3(1)  <---------CCA1(2)<---------RAP2.6(2)--------->LBD16  --------->ZAT14   <----   gacttcgccgtagtaactcctacatccatatcccttgtcagattccggccaaaacggcctcaccggagtcccgacgagagagcagtggcgttttcgtaat  8435000 -----ATHB1 ----->ATHB51 ---->HAHB4 ------ICU4                                                        <---------ZAT14 ----->ATHB12                                                  --------->DAG2 -----YAB1                                                  ---------->DOF2 ---->ICU4                                            ---------->DOF2 *TSS                 ---------- -----ATHB51                                      ---------->DOF2  --------->ZAT14        <----------DOF2   aattggagggttttgagggcaaaattagaagagcgagagagagagagagagagaaagaaagagaaagagtgaagtcgctaatagtctatgggcttcaatt  8435100                                         --------->ANAC55(2)                                         <---------ANAC55(2)                                         --------->ANAC58                                         --------->ANAC55(1)                         --------->At4g35610                         <---------HSFC1(2)                         --------->ZAT2  --------->ANAC58                         --------->HSFB2a(1)                         <---------HSFB2a(1)        ------>ZmHOX2a(1)                         --------->HSFC1(2)  --------->ANAC58                         <---------ZAT2  --------->bZIP60(2)                                 --------                         <---------At4g35610 --------->ANAC58                            <---------ANAC58                    --------->At4g35610  <---------TGA1a                                 <---------ANAC58                 --------->ZAT2          --------->TGA1a                          --------->AtLEC2                 --------->At4g35610     --------->O2                           --------->YAB1                 <---------ZAT2          <---------O2                           <---------ICU4  <---- -->CBF          <---------At4g35610     --------->ANAC46                      <---------ATHB12 -----   ttaggggaatggtttttggagcagcgaagctccctagactgccacgtaagcatcctattagtctctctagattatagcctaatcatgcattgcttaagta  8435200           <---------AHL20(2)          <---------AHL20(2)      <---------YAB1    --------->AHL20(2)    <---------ICU4    <---------AHL20(2)    --------->ATHB51    --------->YAB1                                <-----------HVH21    <--------HAHB4                             <---------ANAC58    -------->ATHB1                        <---------AHL20(2)                      <------------MYB.PH3(1)   <---------ATHB51             <---------At4g35610                          --------->YAB1        --   <---------ATHB12      --------->ARR11(3)    <---------ANAC58       ----------->GT1              <-   --------->ICU4        <---------ARR11(3)  <-----------GT1     --------->AHL20(2)           <------ ->ANAC55(2) <---------------AGL15      <---------YAB1           --------->AHL20(1)           <------ -----ARR14(2)      ----------->GT1  <---------YAB1      ----------->GT1     ----------->GT1  ------- ---->ARR14(2) <---------AHL20(2) <---------YAB1 --------->ANAC46<---------AHL20(2)          --------   tcccaattattttttattttttgggtaaatcttatgctgattatttttttcgcgtcaaacagtgaaataaaatagtaaatggtaacagttttatattaaa  8435300         -------->HAHB4         <---------ICU4         --------->YAB1        <---------YAB1      --------->YAB1     <---------AHL20(2)     <---------YAB1    <---------AHL20(1)    --------->AHL20(2)                                                                   <-----------GT1    --------->AHL20(1)                                                    <-----------ARR10   --------->YAB1                                                         --------->ARR14(2) ------->AHL20(2)                     --------->ANAC46                    <---------ARR14(2) --------AHL20(2)         ----------->GT1                                 <---------ARR11(3) ---AHL20(2)            ---------->DOF2 ---------->DOF2                   --------->GLK1(2) ---AHL20(1)        <---------ZAT6    --------->ANAC58                    --------->ARR11(3)  <------ -->AHL20(2)     --------->ATHB12     --------->ANAC58                   <---------ARR14(1)  -------- ->AHL20(2)     <---------YAB1  ------------------------>ANAC81   --------->YAB1        <---------YAB1   tttaaatataataatagcatgagtgataaagaaaaatgacacgaaagaaaacagagattattttgtaatcagagagtatcttgtttgtttattactgagt  8435400                                                                     <---------------AGL15                                                                     --------------->AGL15                                                                     <---------HSFB2a(2)                                                                    =================================                                                                    ----------------->AGL3                                                                    <-----------------AGL3                                                                    ----------------->AGL2                                                                    <-----------------AGL2                                          <---------RVE1(1)    --------->AHL20(2)                  <-                                      ------->MYC3             --------->ATHB51            <---------                                   <---------ANAC58            <---------ICU4              ----------                                   <---------AtLEC2            <---------AHL20(2)          ==========       <---------AHL20(2)          <---------ANAC58        --------->AHL20(2)             ----------- ---ANAC46                 <------ZmHOX2a(2)   <---------YAB1 --------->ICU4              <---------- ->ATHB12              --------->SPL7 <-------MYC3 --------->AHL20(2)--------->HSFB2a(2)  -----------   ggatgtcaatttatctaaaatcgcatacgatcaatttgcatgtgatattttgattaaacaactaattatttctataaatggataagagttattccaaaaa  8435500           <----------DOF2        --------->AHL20(1)        <---------ARR11(3)        <---------AHL20(1)        --------->ARR11(3)       --------->RVE1(1)       --------->CCA1(1) ======MADS_MADS                                                   <--------P ---------ID1                                                    <---------MYB46(3) ------AGL15                                           --------->TOE2(3)                   <--------- ----->AGL15                                          --------->YAB1              ------>ZmHOX2a(1) ==================================================================================================== ------>AGL2                                          <---------ICU4              --------->LBD16   < -------AGL3                       <----------DOF2 --------->WOX13(1)         <-----------GT1     <-- ------>AGL3                       --------->TOE2(3) <---------ATHB12  <---------ZAT6   <-----------GT1   tagaacaaaatatcttttgtgttttgtttgtatactactttagtctagatggacaatcatcaattcttggttagtgtttttttcctggttttacaattct  8435600  Previous    Next  AGI:  At4g14720.1    Description:  PPD2 (PEAPOD 2). Identical to Protein TIFY 4B (TIFY4B) [Arabidopsis Thaliana] (GB:Q8GY55;GB:O23328); similar to PPD1 (PEAPOD 1) [Arabidopsis thaliana] (TAIR:AT4G14713.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71225.1); contains InterPro domain Acireductone dioxygenase, ARD (InterPro:IPR004313); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 8431968    to: 8435070    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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