Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->RAP2.3(1)                                                                    --------->ATERF1(1)                                                                    <------NtERF2                                                                    <---------LBD16                                                                   <---------ERF1                                                                   <---------RRTF1(1)                                                                   <---------RAP2.3(1)                                                              --------->DEAR3(2)                                                            --------->CCA1(2)                                                           <---------ARR11(3)                                                           --------->ARR11(3)                                                           --------->ARR14(2)                                                      --------->LBD16   <---------GLK1(2)                                                     <---------ANAC58  <------NtERF2                                                     <---------ANAC58 --------->LBD16                          <----------DOF2            <---------HSFB2a(2)<---------ARR14(2)                          --------->GLK1(1)          <---------ANAC46--------->RAP2.3(2)               --------->ANAC58                      --------->HSFB2a(2)--------->ARR14(2)               --------->ANAC58                  ------>ZmHOX2a(2) <---------RAP2.6(1)               <---------O2                     <------ZmHOX2a(2)  ------>NtERF2               --------->ANAC46                --------->GLK1(2)  <---------DEAR3(1)               ======================bZIP_DOF  --------->ARR11(3) --------->DEAR3(1)               --------->O2                    <-----------ARR10<---------RAP2.3(1)               <---------TGA1a                 --------->ARR14(3)--------->RAP2.6(1)               --------->TGA1a                 <---------ARR14(3)--------->ERF1            ----------->HVH21                  <---------ARR14(2)--------->RRTF1(1)         <---------ARR11(3)       <---------ANAC46  <---------LBD16<---------ATERF1(1)         --------->ARR11(3) <-----------GT1    <---------ARR11(3)--------->ATERF1(1)        --------->CCA1(1)<---------ARR14(2)    <---------AGP1--------->MYB52(1)        --------->RVE1(1)--------->ARR14(2)    --------->ARR14(2)--------->RAP2.3(1)    --------->AHL20(2)  <------NtERF2         <------ZmHOX2a(1) <---------ATERF1(1)              <---  ----------->GT1     <---------ANAC46  --------->CCA1(2)  <---------ARR14(2)         <-------TEIL   atcgaagtaaatatctcacgcgaggcggatttactggctgagaaacgaggatcttgcggaagataccggcgccggaatcgtctccaggctcatagagagc  8429200                                                                            --------->RAP2.6(2)                           ----------->ARR10                              --------->At4g35610                       ----------->RAV1(2)                            <-----------HVH21                     ------>ZmHOX2a(2)                              ------->MYC3                   --------->ARR14(2)                               <-------MYC3                   <---------ARR14(2)                              --------->O2                 -----               <---------ANAC58        ----------->HVH21           <---------O2                 ----- -------DOF2   <---------ANAC58        --------->ANAC46  ------>ZmHOX2a(1)<---------At4g35610   -----   tttaagagataaaacttgctggatcgcctgagatttgttccacgacggtcttcgcattcctatttcgacatgtgtcagcctccattctcagaataaacaa  8429300                  <---------ZAT14           <---------ETT(1)           ----------->HVH21     --------->DAG2                                <---------ARR14(2)    ---------->DOF2     <---------GLK1(2)          --------->ARR14(2)                       >>>>>>>>>TBF1 ---->ANAC58      --------->ZAT14           --------->LBD16 ----------->GT1              >>>>>>>>>TBF1 ---->ANAC46------>NtERF2                   <---------At4g35610                 --------->DAG2 ---->ANAC58----------->RAV1(1)             --------->At4g35610               ---------->DOF2      --   gcaaaaaaaagctccgacagagtagagaatttcaaaatttgacttccgctgcaaatcggagaaggaaacaagactatggagaaaggtagaagaagaagaa  8429400                                      <---------At4g35610                   <---------RAP2.6(2)--------->ZAT2                                             ----                   <---------RAP2.3(2)--------->At4g35610                         --------->ANAC58            <------ZmHOX2a(1)         <---------ZAT2             --------->At4g35610             ----          <---------TOE2(3)   --------->HSFB2a(2)      --------->ZAT14            --------->ANAC58      <----------DOF2<------NtERF2  <---------ZAT14    <---------ZAT14     --------->ARR14(2)   <---- ------->TOE2(3)  <---------LBD16   --------->ZAT18 ------>ZmHOX2a(1)      <---------ARR14(2)  <-----   acctttgtctttgaggaatttgcggcagtcttcgcgagtgagctgagaaatgtcctcttcagtgagtagcttcagaggtttcgcaagtatagacttcgcc  8429500                                        --------->LBD16                                        ------>NtERF2                                       <---------LBD16                                       --------->LBD16                                   <---------ARR14(2)                                   --------->ARR14(2)                                   --------->GLK1(1)                                   <---------GLK1(1)                -------->HAHB4                                  <---------ARR14(2)                --------->YAB1        ------>NtERF2             <---------GLK1(2)     <---------ANAC58             --------->At5g28300       <---------ETT(1)           --------->ARR14(2)    <---------ANAC46     <---------ARR14(2)       --------->ANAC46         --------->LBD16  --------->ZAT18    <---------ICU4  ----------->GT1 ----->LBD16                  <---------LBD16    <---------ZAT14   --------->ICU4 <---------ANAC46 ------->GT1            ------>ZmHOX2a(1)<------NtERF2  <---------ANAC58  <---------TOE2(2)    <----- -----DEAR3(1)       ------>ZmHOX2a(1)<---------LBD16--------->ALFIN1     <---------TOE1(2)  -------- ----LBD16   <-------TEIL <-----------HVH21      --------->ZAT14 --------->YAB1  <---------LBD16   ggtgaaactccgacatccatctcctcctcttcaccggaatcccggcgagagagcagtggcgtttcagtaataatcggaggttttgggggtaaaattagga  8429600                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                       <---------ZAT2                                                                                       --------->ZAT2                                                                                   --------->LBD16                                                                                   --------->ANAC46                                                                                  ----------------->AGL1                      <---------ANAC58                                            <-----------------AGL1                      <---------ANAC58                                            <---------LBD16                      <---------ANAC46                        ------------>CBF    <---------HSFB2a(2)          --------->At4g35610     <---------AtMYB61         ----------->GT1       --------->HSFB2a(2) -ZmHOX2a(1)       --------->ALFIN1       *TSS      ------>ZmHOX2a(1)<---------LBD16--------->LBD16 ->MYB59  <---------At4g35610     --------->MYB59 ----------------->AGL1   <------------CBF    ------   agaatgagagagagcggaacagtggcgagagagagtgaggtcgaatagtttttcctatgggggagtcaatttgggggaattgttcccggagcagggaaac  8429700                      --------->O2                      --------->ANAC46                      --------->TGA1a           <---------O2           --------->O2           =====================bZIP_bZIP           --------->TGA1a           <---------TGA1a           --------->ANAC58           --------->YAB1           <---------ANAC55(2)     --------->YAB1           --------->ANAC55(2)    --------->AHL20(2)           --------->ANAC55(1)    <---------ATHB51           --------->bZIP60(2)    --------->ICU4           --------->ANAC46    --------->AHL20(2) <---------ICU4                         <----------DOF2           --------->ANAC58  --------->TOE2(3)    --------->YAB1                         <---------DAG2 ----HSFC1(2)         <---------O2<---------AHL20(2)     <---------At4g35610            <---------DAG2 --->HSFB2a(1)      <---------ALFIN1 <---------YAB1      --------->At4g35610       <-----------GT1 ----HSFB2a(1)  <---------At4g35610<---------ICU4<---------ATHB12                 <---------CCA1(2) --->HSFC1(2)   --------->At4g35610-------->ATHB1--------->ICU4              <----------DOF2        -   tccctagactgccacgtaagctccacgtctacataaattattataagcctaatcatggctgctaaacttgctaagtttacttttatatcccctttttctt  8429800                                             <---------ICU4                                             -------->HAHB4                                             --------->ATHB12                               <--------                                            <---------YAB1                       <------MYB83                                        --------->AHL20(2)                       <------MYB46(1)  ---                            <---------TOE2(3)--------->YAB1                     --------->MYB59 <----         --------------->AGL15          <---------AHL20(2)                   <---------REM1(1)  -----         ============================================================================================         <---------------AGL15    <------ZmHOX2a(1)                         <---------TOE2(3) <------ZmHOX2a(1)     --------->MYB46(3)     <---------YAB1  --------->ICU4             <---------ZAT6       <-------- -------->AtLEC2--------->YAB1 --------->CCA1(2)                   <---------ZAT14      <----------DOF2   ccattcaactactgtttattgtaatccattaagataggagaataaaatgattactccaattctatagactatagagttaatgtaggtcggatttaaggag  8429900                                                                     ----------->RAV1(1)                                                                     ------->GAMYB                                                                     --------->TOE2(3)                                                                    <---------MYB55(2)      <---------------AGL15                                         --------->MYB46(3)      --------------->AGL15     --------->RAP2.6(2)                -------->P -TOE2(3)    ----------->GT1    ----------->RAV1(1)    <-----------ARR10                           -- ------>GLK1(2)              --------->ANAC58          --------->ARR11(3)                 <----------DOF2 -----HSFB2a(1)              --------->ANAC58          <---------ARR11(3)                 <---------DAG2 ---->HSFB2a(1)        ---------->DOF2                 --------->GLK1(2)               <---------ALFIN1 =====================MADS_MADS<----------ID1     ----------->GT1  ------>MYB83--------->ANAC46   --- -TOE1(3) ---------->DOF2  ---------->DOF2  --------->ANAC46       ------>MYB46(1)   --------->AtMYB61   attccaaactctaaaaggaaattacaaaagaaagccacaaatgtaaacgaaaacgaaaatcttatgtccaaccacaaatacacaaaaccacacttttctt  8430000                                          --------->MYB46(3)                                          <---------HSFC1(2)                                          <---------HSFB2a(1)                                          --------->HSFC1(2)                                      <---------MYB52(2)                                    ------>MYB83                                    --------->MYB52(1)                                    ------>MYB46(1)                                    --------->MYB52(1)                                   --------->MYB55(1)                                  ------>MYB83                                  <---------MYB111(1)                                  ------>MYB46(1)                                  --------->MYB46(3)                                 ------->GAMYB                                  --------->AtMYB61                                --------->ANAC58                                  <---------MYB111(2)                              --------->ANAC58                                  <---------MYB46(2)                             --------->MYB46(3)                                  <---------MYB52(2)                             <---------MYB111(2)                                  <---------MYB55(2)                             <---------MYB55(2)                                 --------->ANAC46                        --------->ANAC58                               ------->GAMYB   --------->TOE2(3)         --------->ANAC58                               --------->AtMYB61        <-----------HVH21--------->ANAC46                              --------->MYB46(3)  ---------->DOF2      --------->CCA1(2)                              <---------MYB55(2)------>ZmHOX2a(1)     <---------ARR14(2)                             -------->P   --------->HSFB2a(1)         --------->ARR14(2) <---------MYB52(2)                            ------->GAMYB------->TEIL   <-----------TGA1<-------TEIL--------->MYB46(3)                           <---------MYB111(2) --------->TOE1(3)    <---------YAB1------->GAMYB ---->ZmHOX2a(1)           --------->MYB46(3)------>MYB46(1)        <---------TOE2(3)--------->AtMYB61 ------>TOE2(3)            <---------MYB55(2)------>MYB83<---------MYB52(1)--------->ANAC46 ------->TEIL   ccttagaaccgtgaacatgttcgataacaacaaccaccaaacgaaccatccttaaaaccgtcagcatgttaagatacacaacaacaaccaaacgaaccat  8430100  Previous    Next  AGI:  At4g14713.1    Description:  PPD1 (PEAPOD 1). Identical to Protein TIFY 4A (TIFY4A) [Arabidopsis Thaliana] (GB:Q7XA73;GB:Q3E6U2); similar to PPD2 (PEAPOD 2) [Arabidopsis thaliana] (TAIR:AT4G14720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71225.1); contains InterPro domain Acireductone dioxygenase, ARD (InterPro:IPR004313); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 8426705    to: 8429642    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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