Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------AHL20(2)                                                     <---------YAB1                                                    <---------AHL20(2)                                                  <---------YAB1                                                <---------AHL20(2)                                               <---------YAB1                                              <---------AHL20(2)                                         <---------AHL20(1)                                      <---------AHL20(1)                             <---------ICU4--------->AHL20(1)                            <---------YAB1 <---------AHL20(1)                --------->AHL20(2)    --------->AHL20(2)                                           <-          ----------->GT1  <-----------GT1 <---------ARR11(3)              ------------------------>ANAC81       --------->ATHB12   <-----------GT1<---------AHL20(2)                <----------ID1       -----      <---------YAB1    <---------AHL20(2) --------->ARR11(3)        ----------->GT1            <---- -------->ARR11(3)<---------AHL20(2)  <---------AHL20(2)            ------------------------>ANAC81<- ---------ARR11(3)--------->AHL20(2)  --------->AHL20(1)          --------->MYB52(1)           <----- --->GT1>>>>>>>>>ARR2 <---------AHL20(2) --------->AHL20(1) <---------TOE2(3)          ---------->DOF2   aaaatcttttgattgtaaatttatatttttatcatttcaataaaatatttttatttttatttaagaaaaaacagaaaaaaacaaaaaacaaaagaacata  8397300    <---------ANAC58    <---------ANAC58    <---------ANAC46    <---------ANAC55(2) --------ICU4 ---->ATHB51 -----ICU4                                        --------->MYB59 ----------RAV1(1)                           --------->DAG2     ---------->DOF2 ----YAB1     --------->ATHB12              ---------->DOF2   <---------YAB1       <---------YAB1  <-   attgttgcgtacaaaatgagtggctaatgggtttgaactagacagaaaaagttagggacgttttatcaaagactattgtaggcttatacttgtttgtttt  8397400                                                                                                 ====      <---------ANAC58                                                                           ----      <---------ANAC58                                                                        -------     ---------->ID1                                                                      --------->TOE2(3) <---------ANAC58                                                                        <----------DOF2 <---------ANAC58--------------->AGL15                   <-----------GT1                 --------->TOE1(3) -----ZmHOX2a(1) <---------------AGL15            <---------YAB1                --------->ATHB12-----   aggacttgtcgttctatgtctatttgtagtagtctctacttgttagaataagatgattttttcaaaactaattttgcacaagtgatttgaactttaacaa  8397500                    <---------AHL20(2)                   --------->AHL20(2)                  <---------YAB1               <---------AHL20(1)               --------->AHL20(1)               --------->AHL20(2)           --------->AHL20(2)           <---------AHL20(2)          <---------YAB1        <---------ICU4        --------->ATHB51        --------->AHL20(2)        <--------HAHB4        --------->YAB1                           --------->AHL20(2)        -------->ATHB1                           --------->AHL20(1)       <---------ATHB51                          <---------AHL20(2)       --------->ICU4                 ----------->HVH21       <---------YAB1               <---------TGA1a  ----------->RAV1(1)               --------->TGA1a                    --------->HSFC1(1) =============================================bZIP_DOF                 <---------HSFB2a(2) ------>DOF2--------->AHL20(2)      --------->bZIP60(2)                --------->HSFB2a(2)         <- -->MYB46(3)<---------AHL20(2)      --------->O2<---------AHL20(2)     <---------HSFC1(1)      <----- ---->MYB52(1) <---------AHL20(2)   <---------O2--------->AHL20(2)     >>>>>>>ZML2      <------------   acagcgacaattattaatttattatatgggattcagccatgtgactagaattaaattgttcaatccaagagttctagacccaaaaaaaaaacagtactgc  8397600                       ------------>CBF             <---------AHL20(2)             --------->AHL20(2)             --------->AHL20(1)       ---------->DOF2            --------->AHL20(2)      <----------DOF2                                <-----------GT1            <---------AHL20(2)   <---------ARR11(3)                           <---------ANAC58        --------->AHL20(2)       --------->ARR11(3)           ------------>CBF<---------ANAC58       <---------AHL20(2)   <---------AHL20(2)               >>>>>>>>>>>>>>>>>LFY<-----------HVH21      --------->AHL20(2)    --------->AHL20(2)     ----------->GT1          --------->ARR11(3) ---------DOF2        --------->GLK1(2)--------->DAG2 <-------TEIL          <---------ARR11(3) ----ZAT18 <---------AHL20(1)---------->DOF2      --------->DAG2          --------->DAG2 ---AtSPL3--------->YAB1 --------->WOX13(1)      ---------->DOF2        ---------->DOF2      --------   cctttcaatttaaaataatttgagaatcaattaaagagcttaaagtagttgaaaagtacataagtccaatgtagaaaaggtcttgtcacaactctacata  8397700                                                                             <---------GLK1(2)                                                                           <---------AHL20(1)                                             ------>ZmHOX2a(1)             --------->AHL20(1)                                         <---------ALFIN1                  <---------ARR11(3)       *TSS       <-----------GT1   <---------At4g35610            ---------->ID1     ---------->DOF2                --------->ZAT2             <----------DOF2 --->TBP       --------->CCA1(2)    --------->At4g35610    xxxxxxxxxxxxxxxx>smallRNA(i)<<<<<<<<<<<<<<   tagaccataaatcagagatttaagcacttcaaaccttgagctccctcctctctctctctctctctctttgtcttcaaaatattctcagaaaacaatggaa  8397800                                                                     <---------HSFC1(2)                                                                     <---------DEAR3(2)                                                                     <---------MYB46(3)                                                                     --------->HSFB2a(1)                                                                     --------->HSFC1(2)                                                                    <---------DEAR3(1)                                                                   <------NtERF2                                                                  ------------>AtMYB77                                                                  <---------ATERF1(1)                                                                  ------>NtERF2                                                                 ----------->HVH21                      <---------ZAT14                            <---------DEAR3(1)                      --------->ZAT14                            --------->DEAR3(1)                      <------ZmHOX2a(2)                         --------->RAP2.3(1)                 <------ZmHOX2a(2)                              --------->ATERF1(1)                <---------ARR11(3)                              <------NtERF2                --------->ARR11(3)                             <---------RAP2.3(1)            ---------->DOF2                    ---------->ID1  <---------DEAR4(2)   --------->ZAT14  --------->At4g35610   <----------DOF2      <---------ATERF1(1)         ----------   <---------ZAT14  <---------At4g35610  <---------DAG2       <---------DEAR3(1)      <---------HSFB2a(2) <<<LFY----------->HVH21         ---------->DOF2         ---------->DOF2        <----------DOF2   gaaacagcactgacaaaagatcagatcactgagttcaaagaagccttttgtctcttcgacaaagacggcgacggttctcttcctttctctagatggtcat  8397900                                                       <---------YAB1  <---------------AGL15                                                 --------->AHL20(2)    <----------DOF2               ---------->DOF2                   <---------AHL20(2)    ------>ZmHOX2a(1)               <---------ICU4             ----------->HVH21           --------->TOE2(3)          <---------ARR11(3)            <---------ANAC58     <---------ANAC46          --------->ARR11(3)            <---------ANAC58   <---------MYB46(3)                    ----         --------->YAB1                 <---------ANAC46  <--------P ----------------->AGL3--------->ALFIN1        ----------->GT1            <-----------RAV1(1) <---------TOE2(3)              --------->MYB52(1) ->GT1---------->DOF2   ------>NtERF2 <---------ANAC46 <---------TOE1(3)         ----------->GT1 <---   atatagaataaagataataaagacgacgactaatattatgttgtgtgacatttatttatggttgtttggaatcctttaataggttgtataacggtggaag  8398000                              <---------ARR14(2)                              --------->ARR14(2)                             <---------GLK1(2)                          --------->YAB1                      <---------MYB46(3)                     <---------TOE1(2)                                                     --------->ATHB12                    <---------MYB52(1)                                                ------->GAMYB                   <-------GAMYB --------->ANAC46           <---------YAB1           --------->ANAC46                  --------->MYB52(2)                      --------->YAB1             --------->ANAC58                  <---------MYB46(3)                   --------->bZIP60(1)           --------->ANAC58                  --------->MYB55(2)         <---------ARR11(3)                      --------->bZIP60(2)             ------>ZmHOX2a(2)--------->GLK1(2)        <---------bZIP60(1)  <---------YAB1<------NtERF2    ----------->RAV1(1)  <------ZmHOX2a(2)   --------->ARR11(3)      <---------WOX13(1)  ------>NtERF2 ----->ARR11(3)  --------->SPL7  <---------ETT(1)   <---------YAB1<---------TOE2(3)--------->MYB52(1) ------ARR11(3) <---------MYB52(1)----------->RAV1(1) <---------ARR11(3)<---------GLK1(2)----------->RAV1(1)   aacttgcaacagtgatccgttcgttggatcagaatccgacagaacaagaacttcatgatatcatcactgagattgattctgatagcaacggcaccattga  8398100                                                                     <---------AHL20(2)         <----                                                       ------>ZmHOX2a(2)         <---------ICU4 <----                                         <---------ALFIN1            --------->AHL20(2)        ------                                      --------->ARR14(2)            <---------AHL20(2)         <-----     ----------->ARR10                <---------ARR14(2)     <---------YAB1     --------->AHL20(2) --------->At4g35610              <-----------RAV1(2)<---------ARR11(3)   <-----------GT1    --------   atttgctgagtttctcaacctcatggccaaaaaacttcaggttccactctctcttgatctctcatgcttatttatttcacaactaattacatcaagttaa  8398200  Previous    Next  AGI:  At4g14640.1    Description:  CAM8 (CALMODULIN 8); calcium ion binding. Identical to Calmodulin-like protein 8 (CAM8) [Arabidopsis Thaliana] (GB:O23320); similar to calmodulin, putative [Arabidopsis thaliana] (TAIR:AT3G22930.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70418.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 8397707    to: 8400071    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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