Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <-----------HVH21                         >>>>>>>>>GATA-2                          ------>ZmHOX2a(1)                         >>>>>>>>>GATA-4                   <---------GLK1(2)                         >>>>>>>>>GATA-1                   --------->ARR11(3)                         >>>>>>>>>GATA-3              -------->P --------->TOE2(3)                --------->MYB46(3)                 <---------At4g35610                <---------MYB55(2)                 --------->At4g35610                             --               ------>MYB83               ------>ZmHOX2a(1)<---------ARR11(3)        --------->ANAC46 ----->ANAC58  ------>MYB46(1)           --------->ANAC46  --------->ARR14(2)     --------->ARR14(2) ----->ANAC58 ----------->RAV1(1)    <---------At4g35610   <---------ARR14(2)     <---------ARR14(2) --DOF2   <---------WRKY18(1)        --------->GLK1(1)--------->MYB52(1)  <---------ALFIN1--------->ANAC46   agcattgtctcttgaccaacaactgtggattgaataggcatctcctcaacttgagctaccagattttcctcagtcaccacatcaaatactccacgagaag  8383100                                                     <----------DOF2                                             --------->YAB1                                             --------->ATHB12                                             -------->HAHB4                                             <---------ICU4                                            --------->ICU4  --------->GLK1(2)     --------->ANAC58    <---------YAB1 --------->ARR14(2)     --------->ANAC46  <---------ICU4       <----------DOF2 <---------GLK1(2)      --------->ANAC58  --------->YAB1 --------->HSFB2a(2)          --------->ANAC46 --------->ARR10   <---------ICU4        --------->ICU4  <---------HSFB2a(2)  ----------->RAV1(1)   -   agagattctcaacttccttcaacatcacgctaaccattttcccataatgatagctctttccaaaacttttggagcaaaacccacaaaaacacaacctctc  8383200                                                                                                   <-                                                  --------->ANAC58                            -------                                                  --------->ANAC46                            -------                                                  --------->ANAC58                            -------                                  <---------DAG2<---------ICU4                               --------                          -------->ATHB1<---------HSFB2a(2)          --------->TOE1(3)      <--------              <-----------GT1   ------->TEIL    <-----------GT1     ----------->RAV1(2)    <---------bZIP60(2)             <---------YAB1    <-----------GT1  --------->YAB1    <---------ALFIN1         <---------bZIP60(1)           <---------ICU4 --------->ATHB12   <---------ICU4  --------->ANAC46              --------->bZIP60(1)         <----------DOF2  <---------ICU4--------->HSFB2a(2)  --------->ANAC58           ----------->HVH21 -------->TOE2(3)        <---------ATHB12    --------->YAB1  --------->ANAC58   ---------->DOF2------   tatctcaacctctttattactaaacaaatcattgaaccttttctcgataatcacgacatttgtaagccatacctgaacttgagaaagcctatgacgacgc  8383300                                                                                         --------->HSFB2a(2)                                                                                         <---------HSFB2a(2)                                                                                        <---------LBD16 --------HSFB2a(2)                                                                     <---------LBD16 -->ANAC58                     --------->ANAC46                  <---------DAG2     --------->GLK1(2) -->DEAR3(1)             <----------DOF2             --------->ARR11(3)    <---------At4g35610 -->ANAC58          --------->HSFB2a(1)              <---------ARR11(3)    --------->At4g35610     <- ->ATERF1(1)        --------->HSFC1(2)         <---------ANAC58  <----------DOF2   <---------ARR14(2) -ATERF1(1)         <---------HSFC1(2)    <----------DOF2       <---------ANAC58   --------->ARR14(2) >NtERF2   <----------DOF2   <-----------GT1   <---------ANAC58 <---------ANAC58   <---------GLK1(2)   cctagaaattcttctttatcgacccttcttttcacatcatcgtgctttgtcttgagaacttcaatggctttttgtagagctgctagattctcgggaaggc  8383400                                                                                   ------>MYB46(1)                                                                                   ------>MYB83          <----------DOF2                                                        --------->AtMYB61         <---------DAG2   --------->ATHB12                                       ------->GAMYB      <-----------GT1    <---------YAB1                   ----------->HVH21     --------->MYB46(3)  ------->TEIL    --------->ANAC58                      <---------ANAC55(2) <-------TEIL   *TSS  ---- --------YAB1     --------->ANAC58<---------ZAT14       --------->ANAC55(2)--------->CCA1(2)     ----   tatgaatgtaaccttttctaacgcataaccattgagagaactgattcacaaactgatcacatgacaccgagaccgagatacaacctcccatcttggctca  8383500                                             ---------->DOF2                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                       --------->GLK1(1)                                      <---------ARR14(2)                                      --------->ARR14(2)                                    --------->DEAR3(1)                                   --------->DEAR3(2)         ------->TEIL                                --------->MYB46(3)       <------------CBF           <------------CBF    --------->ANAC46         --------->ATHB12     --------->CCA1(2)         --------->ANAC58        <---------AHL20(2) ----->ANAC58                  --------->ANAC58        <---------YAB1                   <------------ ----->ANAC58   <---------GLK1(2) ------->TEIL   ------------>CBF--------->DOF5.7(2)---------->DOF2   agacaagagatgagattggattttcttccactcacgcaccgatctccaaaagtcaatttcattgaacgtttactttggacgaatataaaagacttataca  8383600                   --------->ANAC58                   --------->ANAC58                   --------->ANAC46              ------>NtERF2             --------->DEAR3(1)           ------->GAMYB          --------->MYB46(3)         ------>MYB83         ------>MYB46(1)        --------->MYB52(1)       --------->TOE1(2)       --------->TOE2(2)       ------->GAMYB       --------->AtMYB61                                                                            -      <---------MYB52(2)                                                                            <      <---------MYB55(2)                                             <---------DAG2                 -      --------->MYB46(3)                                             <----------DOF2           <-----     --------->ANAC46                                            <---------ZAT18               ------     --------->ANAC58                      --------->YAB1       <---------ANAC46      ------>NtERF2--     --------->ANAC58                 --------->AHL20(2)   --------->MYB52(2) --------->ZAT14  ------ -----------TaNAC69(2)          ---------->DOF2         <----------DOF2       <---------ZAT14--------   actatacaaccaacgacgaccacgacttcatcttcaaagaaaaaataagaatcaaactctttagttgtgggctttatgagtttagtgaggcccaaatata  8383700   <-----------------AGL1 -------->ARR11(3) ---------ARR11(3)                                                                             ------ -------->AHL20(1)                                                         --------->TOE2(3)   ====== ----AHL20(2)                                                              --------->TOE1(3) <------- --->AHL20(2)                                                       --------->YAB1       ------>ZmHOX2a(2) ------->AHL20(2)                        ------------>CBF         <---------WOX13(1)   <---------ARR11(3) ----->TBP             --------->ZAT6   --------->TOE2(3)  <---------AHL20(2)  ---------->DOF2<------ ->YAB1 <------------CBF     <---------ATHB12              *TSS --------->ATHB12       --------->ARR11(3)   aatatatccaaattggcccattcttccactaatgaacaacatcatcaattcgattcccaaatttatcgattgataaaccctaaaagtctgatcttgatct  8383800                                                                                 <------MYB83                                                                                 <------MYB46(1)                                                                                 <---------ANAC58                                                                                 <---------ANAC58                          <---------HSFB2a(2)                          ------>ZmHOX2a(2)                          --------->HSFB2a(2)                        <---------ARR14(2)                       <----------DOF2                               --------->ARR11(3)                     ------>ZmHOX2a(1)                               --------->ARR14(2)                   <-----------------AG                             <---------GLK1(1)                   ------>ZmHOX2a(2)                             --------->LBD16 <---------ANAC46                   <-----------------AGL1               --------->DAG2<------ZmHOX2a(2)          ---------->DOF2<---------LBD16 <-----------RAV1(1)    --------->HSFB2a(2) >ZmHOX2a(2)     <---------ARR14(2)      <---------MYB46(3)     <---------HSFB2a(2)            <----- ===========================HOX2a_HOX2a--------->At4g35610   --------->ARR14(2) --------->MYB46(2) --ARR11(3)      --------->ARR14(2)    <---------At4g35610   <---------ARR14(2) <---------DEAR3(1) ---GLK1(1)  <---------At4g35610   <-----------HVH21  ---------->DOF2<---------ARR11(3)  <-----------RAV1(1)   ctgggcattgttcaaagctgatcctctttcggaaaaatgtcatctgttggaacatcgaaaggggttctggagatcgtcaagttcggtgtctatgtcgctg  8383900         ------>ZmHOX2a(1)         ----------->RAV1(1)    ------>ZmHOX2a(2)            --------->At4g35610   =============HOX2a_HOX2a     ------->GAMYB                             ------>ZmHOX2a(1)   <------ZmHOX2a(2)         ----------->RAV1(1)   <-------TEIL        ------>MYB83  <---------ARR14(2)        --------->MYB46(3) <---------ARR11(3)      ------>MYB46(1)  --------->ARR14(2)      ------>NtERF2      --------->ANAC58     <-----------GT1            <------- -----DOF2                ----------->RAV1(1)--------->ANAC58----------->GT1        <----------DOF2   ttccgatcgtccttatgtacacattcgccaacaacagcaccaatatcaagaaattcatgggcaatgtaaaaccatcctctctctctctttcacaaaattc  8384000  Previous    Next  AGI:  At4g14610.1    Description:  pseudogene, disease resistance protein (CC-NBS-LRR class), putative, domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein.; blastp match of 45% identity and 2.2e-162 P-value to GP|24461866|gb|AAN62353.1|AF506028_20|AF506028 NBS-LRR type disease resistance protein {Poncirus trifoliata} Range:  from: 8380843    to: 8383491    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g14615.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G52825.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71274.1) Range:  from: 8383759    to: 8385074    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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