Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------ZAT18                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                          <---------At4g35610    --------->ZAT18                                          <---------ZAT2         --------->ZAT14                                          --------->ZAT2         <---------ZAT14                                          --------->At4g35610 <---------ANAC58             --------->TOE1(2)     <---------ARR11(3)                 <-----------RAV1(2)   <---------ANAC58       <------ZmHOX2a(2)     --------->ARR11(3)     ---------->DOF2          <---------GLK1(2)         --------->DEAR3(1)   atcgagacatcttccatcttcgaattcatcaaaagacgagtctcagcaggctctggatactcttgagtgctctagtaatcgccatcgatcaaaccctcga  8343500                                              --------->ARR11(3)                                    ------>ZmHOX2a(2)                                    ================================HOX2a_HOX2a                                  <---------ARR14(2)                                             ----                                  <---------AGP1====================HOX2a_HOX2a                 -----                      ====================HOX2a_HOX2a                                           <----                      =================================HOX2a_HOX2a                             <-----                      =====================HOX2a_HOX2a                                         ------                      <------ZmHOX2a(1)       <---------ARR11(3)       ---------->ID1          ------                  --------->TOE2(2)<------ZmHOX2a(2)             <------MYB83                  <-----                  --------->TOE1(2)=================================HOX2a_HOX2a                <-----                <---------ARR11(3)--------->AGP1------>ZmHOX2a(2)<------MYB46(1)               ------                --------->GLK1(2) <---------ARR11(3)           <--------P <---------MYB52(1)   <-----                --------->ARR11(3)--------->ARR14(2)          <---------MYB52(1)               <-----            --------->YAB1        <-----------ARR10          ------>ZmHOX2a(1)                 ------         >>>>>>>>>>WRKY26         --------->ARR11(3)       <---------ANAC46                  --------   aatctatgagttgatcaaaatctaggaattgatcaagatctatctcttgatcttccaagtttcctgtaggtttgtcgttactctcaaaaatcgccaagat  8343600 <---------YAB1 -->ZmHOX2a(2) ---->CCA1(2)                                        --------->ANAC58 --ZmHOX2a(2)                                        --------->ANAC58 ----ARR14(3)                                        <----------ID1 --->ARR11(3)                               <---------ICU4                                  <-------- --->ARR14(3)                           <------ZmHOX2a(2)                                   <-------- ----ARR14(2)                           =================HOX2a_HOX2a              --------->CCA1(2) ----ARR11(3)           --------->ARR14(2)  --------->YAB1                       --------->ARR11(3) --->AGP1               <---------ARR14(2) <---------YAB1        <---------HSFB2a(2)        <-------- ----AGP1              <---------MYB52(1)--------->YAB1          --------->HSFB2a(2)  <---------TOE2(3) ------ARR10   ------->GAMYB  <----------DOF2     <------ZmHOX2a(1) <---------ARR14(2)<---------TOE1(3) --->ARR14(2)  --------->AtMYB61       --------->ARR11(3)  --------->DAG2        <---------ARR11(3) --->ARR10    --------->MYB46(3)       <---------ARR11(3) ---------->DOF2--------->MYB52(1) <--------   ctgatcatcgaatacaaccatctccgtttcttctttgagacgatcatcatcaggaacgccaaaagttgcagaacttaactgaagatttagggtttcgtgt  8343700                                                                                          <------ZmHOX2a(2)                                                                <---------ICU4            <---------GLK1(1)                                                                -------->HAHB4           --------->ARR11(3)                                                                <---------AHL20(2)       --------->ARR14(2)                                                               <---------YAB1            <---------ARR14(2)                                                    ------>ZmHOX2a(2)                    --------->AGP1      --------->GLK1(2)                   =================HOX2a_HOX2a    --------->GLK1(2)------>ZmHOX2a(2)     <---------GLK1(2)                    ------>ZmHOX2a(1)    --------->ICU4            <---------AGP1     <---------ARR11(3)              <---------ANAC58        <--------HAHB4              <---------ARR11(3) -ANAC58               <-------GAMYB <---------ANAC58        --------->YAB1             <---------At4g35610 -ANAC58      --------->YAB1         --------->bZIP60(1)     <---------ICU4             <---------CCA1(2) -ANAC46--------->TOE2(3)       <---------ICU4    --------->ARR11(3)     <---------GLK1(2)--------->GLK1(1) -ANAC55(1)   <---------ICU4    --------->YAB1    <---------ARR11(3)<-----------GT1 <-----------HVH21   gaaacaagattcttaatcttgatgtcgttgttaatcttgacgtcctcttgatgatctcttcgataattattcacagattccaattccttcagatctctca  8343800                                            ------>ZmHOX2a(1)                              --------->GLK1(2)                                           --------->TOE2(2)                              <---------GLK1(2)                                           --------->TOE1(2)                              <---------ARR14(2)                                        --------->ARR14(2)                           --------->TOE1(3)                                   ------>ZmHOX2a(1)                                --------->ZAT6                          <-----------GT1--------->HSFB2a(1)                  --------->ZAT6    <----                      <----------DOF2   <---------ARR14(2)               --------->AtMYB61--------->ARR14(2)                      <---------DAG2    <---------ARR11(1)               --------->YAB1 ----------->ARR10   acatcgtagacatcgactcaatcgcttttctcaactcctccgaatcctccgatttagcaagactctcgtcttccaccataactctaaccctagattctct  8343900                                                                            --------->TGA1a                                                                            --------->ANAC55(2)                                                                            <---------TGA1a                                                                            <---------ANAC55(2)                                      ------->GAMYB                         <---------O2                                   ----------->RAV1(1)                      --------->O2                        ---------->DOF2                                     <---------ANAC58                       <------ZmHOX2a(1)       ------->GAMYB                =========================                     <---------TOE2(3)================================================MYC_MYB                ==============HOX2a_HOX2a   ----------->RAV1(1)             <---------ANAC58          ----------->RAV1(2)  <---------ARR14(2)  <------ZmHOX2a(1)        <---------ANAC46        --------->ARR11(3)   ----------->GT1--------->MYB52(1) <------ZmHOX2a(1)        <---------ARR11(3) --------->At4g35610 =======================================MYC_MYB ------DOF2     ------>ZmHOX2a(2)  --------->MYB52(1)      <------NtERF2<------ZmHOX2a(1)   ttacgaacaagaccctgatccttgaggaaagcggaaacaacagaatcaacagaggaatggccgaaggagtagaaggagacgtgagagttggaagaacaag  8344000                 ----------->GT1                --------->TOE1(2)                --------->TOE2(2)                           <---------ZAT6              -------->P                             <------NtERF2          --------->ANAC58                          ------>NtERF2          ==========================HOX2a_HOX2a    <---------DEAR3(1)                               -          --------->ANAC58                        <---------LBD16         <---------TOE1(1)       <--          ------>ZmHOX2a(2)                       ------>NtERF2           <---------TOE2(1)       ---         ===========================HOX2a_HOX2a   --------->LBD16  --------->MYB52(1)             ===         <------ZmHOX2a(2)                        <---------At4g35610    --------->SPL7    --------->MYB52(1)        <---------ARR11(3)                      <---------LBD16======================================        --------->ARR11(3)   <------ZmHOX2a(1)  ---------->CDC5---------->DOF2           --------->MYB46(3) ======================MYC_MYB          <---------YAB1 <----------DOF2 <---------MYB52(1)<---------MYB52(2)   gagtcgtcaagatcgcaacctgtgaatcggaggagagaagacataatagctccgcggctttactgtaaagaccggtacgacgtttggagaaacaaacggc  8344100                ------->TEIL                --------->ARR14(2)           <---------At4g35610           --------->At4g35610         <XXXXXXXXXXXXXXXXXXXXMIR835-3P      <----------DOF2                                                                    --------->ZAT6 ---------->HVH21     ------------>CBF                                         --------->GLK1(2) -------TGA1a   <-----------ARR10                              <----------DOF2<---------ARR11(3) ------>TGA1a  <---------CCA1(2)                           <----------DOF2    --------->ARR11(3) ================bZIP_DOF  --------->YAB1       ------>ZmHOX2a(1)             <---------GLK1(2) =======bZIP_DOF<---------ARR14(2)      <----------DOF2  <---------At4g35610 <---------RVE1(1)   tcgtgactctttcttctgaatcttctcaatcgaaattcttctctttagtcctcccattctgctttctttgatttcacagagattttgagggacactacct  8344200                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                <---------MYB46(3)        <---------CCA1(2)                                                               <---------AtMYB61        --------->ANAC55(2)                                                              <-------GAMYB             <---------ANAC55(2)                                                              <---------MYB52(1) ------>ZmHOX2a(2)                                                             <---------DEAR3(2)  ====================                                                            <---------DEAR3(1)  <------ZmHOX2a(2)                                                            <---------DREB2C(2) =====================                                                            <---------At1g77200<---------ARR14(2)                                                            <---------DEAR4(1) <---------ARR11(3)                                                           --------->DDF1 ==============HOX2a_HOX2a                  ------->TEIL  --------->TOE1(2)         <-----------HVH21    --------->ARR14(2)    <----------DOF2       --------->ANAC58               <-----------RAV1(1)   --------->ARR11(3)  <---------------AGL15   --------->ANAC46           <---------AHL20(2)   <------ZmHOX2a(1)<---------  --------------->AGL15   --------->ANAC58         <---------AHL20(2)     =============HOX2a_HOX2a   ctctctctttatagatagtgtatgtaacaagaaacctagaaacaattgtatatataaaaatgtcggtggttttataggagggatctaggcccgtatcagg  8344300                                                        --------->GLK1(2)                                                     <---------AHL20(2)                                                 --------->AHL20(2)                                                <---------AHL20(1)                                                --------->AHL20(2)                                                --------->AHL20(1)                          ---------->ID1   <---------ATHB12 ================HOX2a_HOX2a        ---------->ID1   --------->AHL20(2)                          <--- ================HOX2a_HOX2a   <----------DOF2  <---------AHL20(2)                               ---- --HVH21  <------ZmHOX2a(1)<-----------------AGL1<---------AHL20(2)                     <---------YAB1   cccattgcaagaggaaattcaaaattttgtcttcttttggcccaaatcaatttaataaaatctgaattaggggttttgttttttgatttcatgatataaa  8344400  Previous    Next  AGI:  At4g14530.1    Description:  similar to AGL97, DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G46408.1) Range:  from: 8343472    to: 8343879    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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