Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->AHL20(1)                                                                                 --------->YAB1                                                                              --------->YAB1                                                                              <---------ICU4 <-------   --------->ATHB12                                                          --------->KAN4(1) ------  <-------TEIL                                        --------->ANAC55(2)   <---------KAN4(2)-------- ------DOF2                           ----------->GT1 <---------ANAC55(2)  --------->YAB1<---------AHL20(2) ---YAB1                         --------->YAB1--------->YAB1          ---------->DOF2   --------->AHL20(2) >YAB1                    --------->AHL20(2)  ----------->GT1     <---------TOE2(3)     --------->AHL20(2)   ttgattcattgtccctaacaagtgagaataaaaaatcacaatgtaaaattgataatacatatcagtttaagaaaaaagaataatcacaaaattaattaaa  8282900                  <---------HSFB2a(2)                  --------->HSFB2a(2)                                                         <------            <---------------AGL15                                                             <------            --------------->AGL15                                                             -------           <-----------------AGL1                ----------->GT1                              -------       <---------MYB52(2)--------->ZAT14    <---------ALFIN1                             --------->SPL7 --AHL20(2)<-----------------AGL2<---------ZAT2<-------MYC3                           <---------ANAC58 ---->DOF2 ----------------->AGL2<---------At4g35610  ---------->DOF2                 <---------ANAC58 ->AHL20(2)<-----------------AG  --------->ZAT2------->MYC3  <---------WRKY18(1)   <----------DOF2   agaaaacaaacaaaccagttttggaagtgttctccagctatgtttcccacatggttcaaagcttgactccattttcgcctcttctctttcgtacttcgag  8283000                                                                --------->LBD16                                                       <-----------ARR10                        <---------GLK1(2)              <---------ARR11(3)                        --------->ARR14(2)             --------->ARR11(3)           ---------->DOF2     ------>ZmHOX2a(1)  --------->At4g35610      --------->ATHB12  <---------ARR14(2)      <-----------RAV1(2)  ------->MYC3       --------->LBD16       <---------ALFIN1    <---------ANAC46                     <  <-------MYC3     ------>MYB83=================================HOX2a_HOX2a                         < <---------ANAC55(2)<---------HSFB2a(2)   --------->LBD16   ------------------>SPL14            <---- --------->ANAC55(1)--------->HSFB2a(2) <---------LBD16--------->ARR14(2)                       <---- ---HSFC1(1)       ------>MYB46(1)    --------->ARR14(2) ------>ZmHOX2a(2)                   <------- ---HSFB2a(2)    --------->AtMYB61    <-----------GT1  <---------AGP1                       XXXXXXXXX -->HSFB2a(2)  <---------ARR11(3)  --------->MYB52(2)  ------->TEIL                     ---------->ID1 -->HSFC1(1)   --------->ARR11(3)<---------MYB52(1)    <---------ARR14(2) <-----------HVH21XXXXXXXXXX   aacacgtttcattgaaagacctcccgaattctcctgtttgtttccgcacatcagatggatctactccgtagaagaccgtcatcactatttgtcccatagc  8283100        ----------->HVH21 ---------ANAC58                                                                           ------>ZmHOX2a(1) ---------ANAC58                                                                --------->GLK1(2) -----ANAC58                                      --------->YAB1               <---------GLK1(2) -----ANAC58                           <---------ZAT2                        <---------TOE2(3) --CCA1(2)                             --------->At4g35610              --------->ATHB12  --------->TOE2(3) XXXXXXXXXXX>MIR396B             --------->MYB46(3)                    <---------YAB1     --------->TOE1(3) XXXXXXXXXX>MIR396A  --------->MYB46(3)--------->ZAT2  --------->ARR11(3) <---------WOX13(1)       <-   ttccttgcacttgacaatctccaacaactcatccaaacaccagctcgaagaagcatagttcttcgatagcaagatgattgagattcttgattccttaatg  8283200                    <---------MYB46(3)       <---------YAB1                         --------->ANAC46                   <---------AtMYB61      ===========================HOX2a_HOX2a    --------->ANAC55(2)             <-------PIF5                 ------>ZmHOX2a(1)                <-----------GT1             ------->PIF5               ----------->RAV1(2)            ----------------------->TaNAC69(2)            --------->ZAT2            ------>ZmHOX2a(2)               ----------->GT1--------->TOE2(3)            --------->At4g35610      <---------GLK1(1)           <------------CBF   <---------ANAC55(2)          <-----------RAV1(2)       <---------ARR11(3)        >>>>>>>>>>>>>>>>>LFY  <---------ANAC46 ---------DOF2 <-------TEIL         --------->ARR14(2)        ------>ZmHOX2a(2)    <---------TOE2(3)   gctttaatgagagcaggtgcgatggtttgacttctctcgatctcctgatcatcgaacatcgtgatcccattgtagttaaactgtttacgtaaatggctca  8283300                                                        <---------ANAC58                                                      --------->ALFIN1                             --                                                     ------->PIF5                           <--------                                                     <-------PIF5                           <--------                 --------->At4g35610                <---------ZAT2                          <--------                 --------->ZAT2              <---------ARR14(2)                             <--------                 <---------ZAT2              --------->ARR14(2)                             <--------                 <---------At4g35610    <---------LBD16 <---------ANAC58                    <--------            --------->TGA1a             <-------MYC3--------->ZAT2                          ---------            <---------TGA1a <---------At4g35610   <-----------RAV1(2)          --------->ANAC58    --           ------->TEIL     <---------ZAT2 --------->At5g28300                 --------->ANAC58<-----       <---------LBD16--------->LBD16   ------->MYC3<---------At4g35610    >>>>>>>>>TBF1  <---------DOF5.7(2)      <-----------GT1<---------ANAC46  --------->ANAC46<-------TEIL     >>>>>>>>>TBF1     --------->MYB52(1)   gaaatgttttacggacgtctgctccgtggaagctcgtaaacacgcggtatctccaggtgcgagacgaagacgaagaagaagaagccatgagataacgtgt  8283400   --------->DAG2  ---------->DOF2 ------->ANAC58 -ANAC55(2) -ANAC58 -ANAC46               ------------>CBF            --------->ANAC46                       <----------DOF2 -ANAC58              --------->ANAC46          <---------ARR14(2)                       >>>>>>>>>>>>WRKY18 -ANAC55(1)        --------->ARR14(2)           --------->ARR14(2)            <-----------GT1 -bZIP60(2)  <------ZmHOX2a(2)            ----------->HVH21                --------->ARR14(2) >ANAC55(2) --------->ARR11(3)       --------->ANAC58                   --------->ANAC55(2) ------->ANAC58    <---------ARR14(2)--------->ANAC46                   <---------ANAC55(2) ------HVH21<---------ARR11(3)       --------->ANAC58    <---------KAN4(2) <---------ARR14(2)    <---   caagaaaagttcaagatcacatatacacaatgtttctgaacgctatgacatatacgaagaataaactggaaaacgcgtattcactattttgacttttgac  8283500                                                          ------->GAMYB                                                         XXXXXXXXXXXXXXXXXXXX>MIR2939                                                       --------->MYB52(1)                                                      ----------->HVH21                                                    --------->ANAC55(1)                             <---------TOE1(2)      --------->ANAC55(2)                             --------->ARR14(2)     --------->ANAC46                   --------->HSFC1(2)               <---------ANAC55(2)                   <---------HSFC1(2)               --------->ANAC58                  ------->TEIL              <----------DOF2        --------->AHL20(2)         <------MYB46(1)               <---------REM1(1)          <---------At4g35610 ----------->RAV1(1)             <------MYB83             --------->At4g35610       ----------------------->TaNAC69(2)                     -------      ---------->DOF2        <---------ARR14(2)     --------->ANAC58               <---------HSFB2a(2) -------DOF2 --------->CCA1(2)  <-----------GT1    <-------TEIL  --------->TOE2(3)<---------LBD16   ttttgagaaaaagagagatgaagcttcttcgtattttcagtctcagcttttgatacgtaacggacaacattaaacaagtttatttctgggtgaatttggt  8283600                                     <---------AHL20(2)                                     <---------ICU4                                     --------->ATHB12                                     --------->AHL20(2)                               <---------TOE2(3)                                  <---------ICU4                                    <---------AHL20(2)                                  --------->ATHB51                                 <---------YAB1----                               --------->YAB1                                <---------AHL20(2)  ----  ---------->DOF2       --------->ATHB12                                    --------->AHL20(2)   <--- ---->GT1          <---------MYB111(1)  <-----------GT1   --------->TOE2(3) <---------AHL20(2)  -----   gattaaaagacagtttgactaactacttattgaccataattttttcaaaatgtttgaatttcttaacaagtttattttttaaatttttaatgtttgaaat  8283700             --------->YAB1             <---------ICU4            <-------TEIL        <---------YAB1      --------->AHL20(2)                --------->ANAC58      <---------AHL20(2)           ----------->HVH21            <---------AHL20(2)     <---------AHL20(2)          --------->At4g35610            --------->AHL20(1)     --------->AHL20(2)          <---------At4g35610            <---------AHL20(1)  --------->AHL20(1)      <---------AHL20(2)                    --------->ARR11(3)  --------->AHL20(2)    <---------AHL20(2)                    <---------AHL20(1)                  <--  <---------AHL20(2)   <---------AHL20(1)                    --------->YAB1                       --- <---------AHL20(2)    --------->AHL20(1)            --------->ZAT14                        --------- --------->AHL20(2)    --------->AHL20(2)            <---------ZAT18                     --------->AHL20(2) ----->AHL20(1)        <---------AHL20(2)            <---------ZAT14                    --------->AHL20(2) ----->AHL20(2)        --------->ARR11(3)      ----------->RAV1(1)                  --------->AHL20(2) ------AHL20(2)        <---------ARR11(3)      --------->MYB52(1)               --------->ANAC58  --- ---->AHL20(2)        --------->AHL20(2)--------->ANAC58  --------->YAB1        --------->ANAC58  <--   taattaaattaatattcatgacaaatatatttttgggctgacaagaaaacaacagttcagtcataatattttgttttttcccaagaaaaaataaaaaaga  8283800  Previous    Next  AGI:  At4g14370.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G16870.1); similar to regulator of chromosome condensation (RCC1) family protein [Arabidopsis thaliana] (TAIR:AT3G23270.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G38850.1); similar to putative regulator of chromosome condensation protein [Oryza sativa (japonica cultivar-group)] (GB:AAT44179.1); similar to hypothetical protein OsJ_018629 [Oryza sativa (japonica cultivar-group)] (GB:EAZ35146.1); similar to unnamed protein produc Range:  from: 8274309    to: 8283259    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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