Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------ICU4                       --------->YAB1                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                 <---------ARR11(3)                 --------->ARR11(3)                 <---------ARR14(2)                 <---------AGP1                 --------->AGP1                 --------->ARR14(2)             --------->At4g35610                                  --------->At4g35610             <---------At4g35610                    --------->TOE2(2)           --------->ANAC46   --------->YAB1        --------->TOE1(2)         ---------->DOF2 --------->GT1  <---------CCA1(2)                  --------->MYB46(3)     ---------->DOF2 >DOF2   --------->ANAC46    <---------ATHB12 --------->YAB1      <---------At4g35610       <--------   gaagaaaaatcacacagcagatctataatcaataatctcgttcttcaatagtaaccaaggagaaatttagcagaaataaagaaagagaagagagtcacca  8243800                         <------NtERF2                         --------->ATERF1(1)                        <---------RAP2.6(3)                        ------>NtERF2                       <---------bZIP60(1)                       --------->DEAR3(1)                       <---------ANAC58                       <---------ANAC58                       --------->bZIP60(1)                       <---------ANAC46                      --------->DEAR3(2)        <----------DOF2                   <-------PIF5                --------->TOE1(3)                   ------->MYC2                --------->TOE2(3)                   ------->PIF5         ------>NtERF2                   ------->MYC3         --------->LBD16                   <-------MYC2        --------->RAP2.6(2)    ---------->DOF2            ---------->DOF2            --------->RAP2.3(2)  --------->TOE2(3)    <----------DOF2<-------MYC3   <---------At4g35610 --------->YAB1          <---------YAB1        - ---GT1 <---------DEAR3(1)       <---------ALFIN1  --------->YAB1  --------->MYB52(1)          *TSS -   ttttcgctcttcggtgaagctcgtgccgtcgtcttccactgccgcaaaacctttaataaaaacctaaagtaacagagcttataagagagacatttgagaa  8243900               <------------CBF              <------------ATHB5              --------->ATHB12                              <-----------HVH21                 -------       <----------ID1                                     --------->DAG2                    ---------     --------->ZAT6                  --------->DAG2      ---------->DOF2         <----------DOF2    - -------->TOE2(3)                   ---------->DOF2   --------->YAB1             <---------DAG2 ----- -------->TOE1(3)          ----------->TBP      --------->TOE2(3)   <---------ALFIN1    ---------->DOF2   aaccctaatactacaaacattgggcctctataaacacaaaaagcccattaacttaatcaaaaagtcaggcccatctcacttcccttttttaaaagaaagt  8244000                                              ------->PIF5 --------->AHL20(1)                           --------->LBD16 --------->AHL20(2)                           <-------PIF5 <---------AHL20(1)                  --------->ATHB12 <---------AHL20(2)               --------->YAB1 --------->ARR11(3)               <---------ICU4                                --------->MYB52(1) <---------ARR11(3)              --------->ICU4 <---------ETT(2)           ----------->RAV1(1)    <-- ---->GT1                  ----------->GT1 <---------ANAC46              <-------TEIL         ------- ->DOF2              --------->YAB1 <---------YAB1                      --------->CCA1(2)   --------- -------->AHL20(2)  --------->AHL20(2) --------->At4g35610       --------->REM1(2)      <---------YAB1 ---->AHL20(2)--------->LBD16  --------->YAB1<---------ANAC46   <---------MYB52(1)   <---------MYB52(1)   aaatatattctagttgccgaaaataaaaattgttaataatcagtggcccgtggacaaaaactagccgtttagagatacaacacaacggttatgtttgttt  8244100                                                                                          *TSS                                               <----------DOF2                     ------------>CBF                                               <---------DAG2                     --------->TOE2(3) --------DOF2                                 <---------DAG2                    ------->TEIL       <- --->ID1                             --------->TOE2(3)                 ------->GAMYB     ------------ >MYB52(2)                           --------->TOE1(3)    <-----------GT1      <---------GLK1(2)<----   ctttgtttcaaacttcaaacctcgtgaatcactcacaaaccctaatcccctttttcattttctctctctctaacgctctctgaatctcaatttcaatttc  8244200                               ------>NtERF2                           <---------ETT(1)                           --------->DEAR3(1)                           ----------->HVH21                           --------->At1g77200        <---------HSFC1(2)--------->DEAR3(2)        --------->HSFB2a(1)--------->DEAR4(1)        <---------HSFB2a(1)--------->DREB2C(2)      <---------ATHB12         --------->GLK1(1) --------DAG2            ------>NtERF2         <------ZmHOX2a(2)         --------->YAB1 >CBF   --------->HSFC1(2)<------NtERF2       --------->ARR11(3)   --------->TOE2(3) -------GT1            <---------ABI4(2)      <---------ARR11(3)   --------->TOE1(3)         --------   actctttcgaaacttcttcaacaatggcaccgacaccatcttcttcaagatcaaatcaaactcaatacaccttaatcagaactccacaaacaaaacaacg  8244300                                           <-------TEIL                                          <------ZmHOX2a(2)                                         <---------ARR11(3)                                         --------->ARR14(2)                                      <---                                         <---------ARR14(2)                                   -------                                         --------->ARR11(3)                                  --------                                         --------->AGP1                               --------->LBD16                                     ---------->DOF2                                ------>ZmHOX2a(2)                                   ------>ZmHOX2a(2)                              <---------ARR14(2)                                  <------ZmHOX2a(2)                               --------->ARR14(2)                                 <-----------ARR10                              --------->LBD16 -----                                 <---------ARR14(2)           --------------->AGL15<------ZmHOX2a(2)                                 --------->ARR14(2)           =======================================         --------->ANAC58        <---------AGP1          --------->HSFC1(2)     <---------ATERF1(1)<-         --------->ANAC58        ------->TEIL         --------->LBD16           <------NtERF2<-------         --------->ANAC46   --------->MYB52(1)      <---------LBD16            --------->RAP2.6(2) -- ->MYB52(1)               <-----------RAV1(2)     <---------ALFIN1            <---------LBD16--------   tctcaatttccactcaaaaaccccaaacccagacggatctaaagatccatctccaccggagcatccagttgaagtaatcggccggatccgagattaccct  8244400                                                                            <-------TEIL                                                                         <---------ANAC58                                                                         <------MYB83     ----------->GT1                                                     <------MYB46(1)   ---------->DOF2                                                       <---------ANAC58 --------->LBD16                                                         <---------ANAC46 ------WRKY18(1)                  <---------REM1(2)                     --------->MYB59 ---->RAV1(2)                   <---------WRKY38(1)                     <---------MYB46(3) --------->AG                  >>>>>>>>>>WRKY63                <---------At4g35610                --- ------>HVH21<-----------GT1 --------->ANAC46                  --------->At4g35610   <---------ZAT14 ==========MADS_MADS         --------->ANAC58                  <---------ZAT2        --------->ZAT14 --------LBD16               --------->ANAC58        --------->SPL7     <---------------AtSPL8 <----- ----------AGL1        ------>ZmHOX2a(2)           <---------SPL7      <---------ANAC46   --------->ANAC46 --------------->AGL1--------->ARR11(3)        --------->MYB52(1)   <-----------RAV1(1) --------->ZAT6 --------->AGL1      <---------ARR11(3) <---------GLK1(2)<-----------HVH21  <---------ZAT14 ---------   gaccggaaagagaaatcaccttcgatcttacaagtcaacacagataatcaaacggtacgagtcagagctgatgttgggtacagagacttcacactcgacg  8244500        <---------LBD16        <---------HSFB2a(2)        --------->HSFB2a(2)        --------->HSFB2a(2)        <---------HSFB2a(2)    <----------DOF2  <---------ARR14(3)                       ---------->DOF2 ------>ALFIN1       --------->ARR14(3)         <---------HSFB2a(2)                             <---- ----DEAR3(1)        <---------ARR11(3)         --------->HSFB2a(2)    ---------->DOF2        ------- -->HVH21            --------->ARR11(3)   ----------->GT1 <------ZmHOX2a(1)                  --------   gtgtttctttctcggagcaagaaggtcttgaagagttctacaagaagtttatagaagagaggattaaaggagtgaaagttgggaataaatgcacgattat  8244600                                                                                                   <-                                             <---------ANAC46                                   -----                                           <---------MYB46(3)                                  ------                                         <---------ANAC58                                      <-----                                         <-------GAMYB                                         <-----                  --------->HSFB2a(2)    <---------ANAC58                                     <------            <-----------RAV1(1)         <---------MYB46(3)                           --------->ARR11(3)          -------->P ---------->DOF2    <------MYB83                                 --------->AHL20(1)          ------>MYB46(1)               <------MYB46(1)            <---------CCA1(2) <---------AHL20(1)      ------->TEIL<---------HSFB2a(2)  <---------AtMYB61         <---------ANAC58   --------->CCA1(2) -----YAB1--------->MYB52(1)           --------->MYB59  --------->TOE1(2)          --------->ARR11(3) -->YAB1  ------>MYB83             <---------YAB1---------->DOF2 <---------ANAC58  <---------ARR11(3) ->ICU4 <---------MYB59          --------------->AGL15 ----------->RAV1(2) <----------DOF2    -------   gatgtatggacctactggtgctggaaagagtcatactatgtttggttgtgggaaagagcctgggattgtgtatcgttctttgagagatatattgggagat  8244700  Previous    Next  AGI:  At4g14320.1    Description:  60S ribosomal protein L36a/L44 (RPL36aB). Identical to 60S ribosomal protein L36a (RPL36AB) [Arabidopsis Thaliana] (GB:O23290;GB:Q7GD84); similar to 60S ribosomal protein L36a/L44 (RPL36aA) [Arabidopsis thaliana] (TAIR:AT3G23390.1); similar to unknown [Populus trichocarpa] (GB:ABK94266.1); contains InterPro domain Ribosomal protein L44e; (InterPro:IPR000552); contains InterPro domain Ribosomal protein, zinc-binding; (InterPro:IPR011332) Range:  from: 8242501    to: 8243895    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g14330.1    Description:  phragmoplast-associated kinesin-related protein 2 (PAKRP2). similar to ATK1 (ARABIDOPSIS THALIANA KINESIN 1), microtubule motor [Arabidopsis thaliana] (TAIR:AT4G21270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71434.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) Range:  from: 8244190    to: 8247440    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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