Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------AtLEC2     <---------ANAC58     <---------ANAC58     <---------ANAC46 -------->ARR14(2) -->TOE1(3)                             <----------DOF2 -->TOE2(3)                        --------->At4g35610                                              - ->HSFC1(2)                        <---------At4g35610                            --------->SPL7 ---- --HSFB2a(1)     --------->ZAT14 --------->REM1(1)                 --------->TOE2(3)            ----- --HSFC1(2)  <-----------GT1  --------->TOE2(3)    --------->ZAT6  --------->TOE1(3)            <----   caaatttgcttgaattcactggacaactacttccttcatctgctttctcacaaacactacttggctcaaccttaatttcactcgtaccctgtttgaatcc  8239900                                        <---------DAG2                                        <----------DOF2                                        <-----                                       <---------DAG2                                     --------->TOE2(3)                                   <-----------GT1                                <---------HSFB2a(2)                                --------->ARR14(2)                                --------->HSFB2a(2) -------->GLK1(1)               <---------ARR14(2)    --------->TOE1(3)           --------->LBD16 ----->LBD16             ------>ZmHOX2a(1)           --------->ZAT6           <---------ARR14(2) ---->HSFB2a(2)          ----------->HVH21        <---------ATHB12    <----------DOF2     --------->TOE1(3) -----HSFB2a(2)        ----------->RAV1(2)    --------->LBD16<-------TEIL     --------->ARR14(2)   agaactcttgagcccagacttcttatcctgacccgattcacccttttccccaataaccctagattcatttctctttctcaaatccgagaaaaccctaatc  8240000                                                 ----------->HVH21                                               --------->ANAC55(2)                                               <---------ANAC58                                               <---------ANAC58                                               <---------ANAC55(2)                                           --------->ARR14(2)                                      <---------ANAC58                                      <---------O2--------->ARR14(2)                                      <---------TGA1a                      <------NtERF2                                      <---------ANAC46                --------->TGA1a                                      <---------ANAC58                --------->ANAC46                                      <---------bZIP60(2)             --------->O2                                      --------->O2<---------ARR14(2)  <---------O2                                     ----------->STF1                <---------At5g28300                            --------->ANAC58   --------->ANAC46      <---------LBD16                -                            --------->ANAC58 ------>ZmHOX2a(2)      --------->MYB52(1)              <                    ============================MYC_MYB            ----------->HVH21               <-                    -------->P     ----------->TGA1               <---------MYB52(2)              <--                    ------>MYB46(1)----------->HVH21         --------->ANAC58                --------                    ------>MYB83 <---------At4g35610         --------->ANAC58                <-------TEIL                   ------>ZmHOX2a(1)<---------TGA2(2)  <---------ALFIN1    ------>NtERF2--------->LBD16                   =================================HOX2a_HOX2a <---------ALFIN1        --------->ZAT18              <---------GLK1(1)  --------->At4g35610  --------->ANAC46<---------TGA1a   <---------LBD16   --------->At4g35610  --------->ANAC58   <---------ARR14(2)--------->ANAC46    <---------YAB1 ----- ----ATHB12  <<<<<<<ZML2--------->ANAC58--------->ALFIN1--------->ARR14(2)<---------ZAT18  <---------SPL7   aaatcagatggactagaactcctacctcgcaaaccagatgacgtggatcgcgtaacccgaccctcgccactcacggcggacttatcaatgcgcggtacag  8240100            <---------At4g35610                  <---------ARR14(2)          <---------ANAC58                       --------->ARR14(2)   --------->ZAT14                           <---------LBD16   <---------ZAT14                 --------->WRKY38(1) <------NtERF2                     ----------->HVH21                               ---------->DOF2 -------->LBD16                   --------->At5g28300  <---------GLK1(2)  <---------ICU4 ------NtERF2                    ----------->GT1 <---------GLK1(2)        --------->ATHB12 --------DEAR3(1)     <------ZmHOX2a(2)   --------->HSFC1(2)           --------->YAB1 -------LBD16        <---------ARR14(2)   <---------HSFC1(2) <----------DOF2<---------GLK1(1) ->ZAT14  <---------ANAC58      <---------DEAR3(1)     <---------ARR14(2)<---------YAB1    --------->ARR14(2) ---->ANAC46--------->At4g35610--------->At4g35610     --------->ARR14(2)--------->ICU4    <---------ARR14(2)   gccggagcactggcttctgagtcgatccaaatgagcggtgactaagcttcggattcggattctctttgctggataatgatttctgaagagcgggatttga  8240200                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                              <------                                                                         <---------MYB52(1)   <------                                                                       --------->DEAR3(1)     -------                                                                       <---------DEAR3(1)     <------                                                                      <------NtERF2           <------                                                                      --------->ATERF1(1)    <-------                                                                     <---------ERF1          --------                                                                     <---------RAP2.3(1)     <------NtERF2                                                                     ------>NtERF2           --------                                                                     <---------RRTF1(1)     <--------                                                                     <---------RAP2.6(1)    <--------                                                                     <---------ATERF1(1)    <--------                                                                    --------->DEAR3(1)      ------>NtERF2                                                                    <---------DEAR3(1)      ---------                                                                   --------->RAP2.6(1)      <--------                                                                   --------->RAP2.3(1)     --------->ATERF1(2)                                                                   --------->ERF1          <---------DEAR3(1)                                                                   --------->RRTF1(1)      --------->DEAR3(1)                                                                   --------->ATERF1(1)     <---------RAP2.3(2)                                                                  <---------ATERF1(1)      <---------ATERF1(2)                  --------->ALFIN1                               --------->DEAR3(1)        <---------RAP2.3(3)            ------>ZmHOX2a(2)                                    <---------DEAR3(1) <----------DOF2           <------ZmHOX2a(2)                                    <---------LBD16  --------->ARR11(3)    <---------ANAC58                                     <---------GLK1(2)       <---------ARR11(3)    <---------ANAC58                        <-----------GT1   <-----------GT1   <---------CCA1(2)  <-    <---------ANAC46           --------->TOE2(3)      <---------WOX13(1)--------->LBD16   <---------LBD16   atttttgcttgagatcggaagtggagttacagacctcaatggttttttaccagatgatggattttcaccggcgccggtgtttatatcttttagccggcgg  8240300      ---------->DOF2 <-------TEIL -----------------WRI1 --NtERF2<---------At4g35610 ---->ATERF1(1) >NtERF2 --------->ZAT2 ----ATERF1(1) ----DEAR4(2) ----ORA47(2) ----ERF1<---------ZAT2 ----RAP2.3(1) -->ATERF1(2) ---ATERF1(2) ---DEAR3(1) -->DEAR3(1) ---RAP2.3(3) ---RAP2.3(2) --ABI4(1) ->RAP2.3(1) ->ATERF1(1) -DEAR4(2)      <---------At4g35610         <---------TOE2(3)    <---------LBD16 -ATERF1(1)     --------->At4g35610    --------->ATHB12    --------->DAG2 -ORA47(2)   ----------->ARR10        --------->ICU4      ---------->DOF2    ---------->DOF2 >LBD16  --------->At4g35610   ----------->GT1     ----------->GT1  ----------->GT1 -RAP2.3(1)----------->HVH21 <---------TOE2(2) --------->ARR11(3)<---------ANAC46    <---------YAB1 - --------ARR14(2)            <---------TOE1(2)<------ZmHOX2a(1) --------->ALFIN1  <----------DOF2  --   cgattcgttgaagctgacatctgcaaaatcgtagggtaaaatgatttaggattttgaaaaaaaagtttgggggaaaaataaaagcttttgatttttgaag  8240400                                                           <---------YAB1                                                         <---------AHL20(2)                                                        <---------AHL20(2)                                  --------->LBD16       --------->AHL20(1)                                 --------->ANAC58       --------->AHL20(2)                                 --------->ANAC46------>NtERF2                        <---------GLK1(1)       --------->DEAR3(1)                       <---------ARR14(2)       --------->RAP2.6(2)                         ---------                       --------->ARR14(2)       <----------ID1                              <--------                       <---------ARR11(3)       <---------ETT(1)                           --------->ARR14(2)          ----------->GT1        --------->ANAC58<---------RAP2.6(3)                     <------NtERF2          <----------ID1--------->GLK1(1)      --------->DEAR3(2)                     <--------------        --------->MYB52(1) --------->ZAT6    --------->ANAC58                 --------->AHL20(1)  <----------ID1       --------->ARR11(3)    --------->ANAC58                 <---------ARR11(3) -------->DAG2        <------ZmHOX2a(1)      --------->ANAC46      ------------>CBF   <---------LBD16 -------->DOF2      <---------ANAC46 --------->GLK1(1)  <---------AHL20(1)    <---------AHL20(1)   aaaaagcacaaaacgataaatggaggatatcactaccgcaactccacaagccgacaaatttattagagtttcaatttcaaaatatttgggcgggatttcc  8240500                                                                                         ----------->HVH21                                                                                        ------->MYC3                                                                                        ------->MYC2                                                                                        <-------MYC2                                                                                        <-------MYC3                                                                                       --------->ANAC46                                                                                       <---------ANAC55(2)                                                                     <---------TOE1(3) <---------O2                                                                 ================================bZIP_DOF                                                           --------->ANAC46            --------->TGA1a                                                           --------->ANAC58            --------->ANAC58                                                           --------->ANAC58            <---------TGA1a                                                         ---------->DOF2     <---------AHL20(2)   ---                                                         ========================================bZIP_DOF                                      ---------->DOF2 --------->ANAC46       --------->AHL20(2)   <--                               --------->KAN4(1)    --------->MYB52(1)       <---------AHL20(1) -----                              <---------KAN4(2)     <-----------GT1  --------->MYB59   --------->O2                         ------>ZmHOX2a(2)        <---------WOX13(1) <---------TOE2(3) --------->ANAC55(1)                        <------ZmHOX2a(2)       --------->ATHB12 <----------DOF2       --------->ANAC55(2) >GLK1(1)              --------->ARR11(3)     <---------WOX13(1)<---------ANAC46 --------->AHL20(2) -GLK1(1)              <---------ARR14(2)    <------------CBF  <------NtERF2 --------->AHL20(1)<----- -------WRI1          <---------GLK1(1)--------->DAG2<---------TOE2(3)----------->GT1  --------->ANAC58   aaaaaaaaaactcaaaatttttggagatcgcgaatgttcaaaaagtcgattgattaacgaaacgcagcgtttaggtaaatttattaaacacgtgatagca  8240600                                   --------->ZAT14                                   --------->REM1(2)                                   <---------ZAT14                            ----------->HVH21                            --------->ALFIN1                           -------->ABF1                           <-------MYC3                           ------->PIF5                           ------->MYC4                           ------->MYC3                           <-------MYC4                           <-------PIF5                           <-------MYC2                                             --------->AHL20(1)                          <---------ANAC55(2)                                       <---------AHL20(1)                          --------->ANAC46                                          --------->AHL20(2)            ----------->RAV1(1)   --------->ALFIN1                                  <---------AHL20(2)           --------->ANAC46------->MYC2                                          --------->YAB1         --------->ANAC58 --------->TGA1a                                       <---------AHL20(2) ------>MYB46(3)          --------->O2               ------->TEIL         <---------ANAC46 -------MYB52(2)          <---------TGA1a         --------->ANAC58        <---------ANAC58 ------>RAV1(1)           <---------O2            --------->ANAC58        <---------ANAC58 -----ID1--------->ANAC58 --------->ANAC55(2)<----------ID1              ------>NtERF2              -   acaaatgcagaacgcgacattttgaaacacgtggcagtgtagaaatagcgacacgaattttgttaactaaaacgctgcgtttttaataaaatatacagta  8240700                                                                     --------->MYB46(3)                                                                   ----------->RAV1(1)                                                                 <---------At4g35610                                                                 <------NtERF2                                                                 --------->At4g35610                                                            --------->ALFIN1                                                           ------->MYC4                                                           ------->PIF5                                                           <-------MYC4                                                           <-------PIF5                                                           <-------MYC2                                                           ------->MYC2                                                           -------->ABF1                                    <---------ANAC46       <-------MYC3                     --------->ANAC55(2)                   ------->MYC3                     --------->ANAC55(1)                  ==================================bZIP_DOF                     --------->ANAC58                     ==================================bZIP_DOF                     <---------ANAC55(2)                  --------->ANAC46                     <-----                     --------->ANAC46                     <---------TGA1a                  <---------             <---------WOX13(1)<---------ANAC58           --------->ANAC55(2)          <------NtERF2            <---------ANAC58   <---------ANAC46           <---------O2             --------->ANAC58 <            <---------ANAC58   <---------ANAC58           --------->O2             --------->ANAC46--           --------->ATHB12   <-------TEIL                --------->TGA1a          --------->ANAC58<- -------->At4g35610  --------->ANAC58<---------TOE2(3)    <---------ANAC55(2)    ---------->DOF2  ---   acagttgaatagttgattgcgacacgaaacgatgcgtttagggtatgctgtttttaaaacacgtggcagcaacaaataaaccgaaacgcagcgttttgag  8240800  Previous    Next  AGI:  At4g14310.1    Description:  similar to hypothetical protein OsI_009189 [Oryza sativa (indica cultivar-group)] (GB:EAY87956.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71438.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046) Range:  from: 8236755    to: 8240320    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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