Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------               <------ZmHOX2a(2)                         --------->ANAC58                    --------         --------->MYB52(1)                              --------->ANAC58    <---------AHL20(1)         ------>MYB46(1)                               --------->MYB52(1)    --------->AHL20(1)         ------>MYB83                              <----------ID1            --------->ARR11(3)       <---------MYB59          <---------ZAT6   <-----------GT1    ------->TEIL      ---------->DOF2       --------->AtMYB61<---------AtMYB61   --------->YAB1------->GAMYB      <---------ARR11(3)   aaacaaaaaccaaaccgatctaagttttggtttagagttcaaacaagaatattacgacaacggaatactgtatgtttgatatatttcacaaagagataca  8220400                                                              <---------------AGL15                                                              --------->TOE2(3)                                                              --------------->AGL15                                                             ----------------->AGL1                                                       <---------YAB1                                                     --------->YAB1                                        <---------GLK1(2)    ----------------->AG                             --------->ALFIN1     --------->YAB1                                    <                           <---------ANAC46       <---------ICU4                                    - -TEIL                     <---------ANAC58      <---------ATHB12    ----------->GT1    <------ZmHOX2a(1) ->CCA1(2)                 <---------ANAC58      --------->ICU4------>ZmHOX2a(1)      <---------TOE2(3)   gagcattgtttatattgtacaagtagtaggcgtgagcctcaagattatgcaataagtataatttcctaaactagtgaattggaatattgaggaatgaatg  8220500                                                                            <---------TOE2(3)          --------->ARR11(3)                                              --------->ICU4          <---------ARR11(3)                 <---------CCA1(2)          --------->YAB1         <---------CCA1(2)              <-------TEIL                 ----------->GT1      <------MYB83       --------->YAB1                 <---------ARR14(2)         <---------ARR14(2)     <--------P <-       <---------ICU4                ------>MYB83                <---------ARR11(3)  <---------TOE2(3)      <---------ATHB12               ------>MYB46(1)             --------->ARR11(3)  <---------TOE1(3) -----------ARR10               <-----------GT1                 <---------CCA1(2) --------->WRKY18(1) -------->GLK1(2)     --------->ETT(2)--------->ARR14(2)       ------->TEIL<---------ICU4 <------MYB46(1)   agcatctaatcatatctctctagctcgacagaataaaccaaatacgtttatctaaataagtcatgtatatcttgtaataatgtagtcaaggttggaatcc  8220600                                                                                       --------->ARR11(3)                                     <---------AHL20(2)                   --------->TOE2(3)                                     <---------AHL20(1)                   --------->YAB1            -                                     --------->AHL20(2)                  ----------->GT1<------ZmHOX2a(2)                                    --------->AHL20(2)         --------->ANAC55(2)     <---------ARR11(3)                             <---------WRKY18(1)               <---------YAB1         <------ZmHOX2a(1)                            --------->WRKY38(1)                <---------ANAC55(2)   <---------HSFB2a(1)                           <---------WOX13(1)            --------->AHL20(1)          --------->HSFB2a(1)                          <-------GAMYB          ------>ZmHOX2a(1)      <---------TOE2(3)------>ZmHOX2a(2)                         <------MYB46(1)        <---------ANAC58     --------->ARR11(3)<---------ARR14(2)                         <------MYB83--------->AHL20(1)  <---------AHL20(1)          <---------HSFC1(2)                        --------->MYB59         <---------ANAC58     <---------ARR11(3)--------->ARR14(2) <----------DOF2   <---------AHL20(2)--------->ARR11(3)  --------->AHL20(2)          --------->HSFC1(2) --------ATHB12    --------->AHL20(2)<---------ARR11(3)  <---------AHL20(2)         <---------TOE1(2)   aatctttttggaaacatgtttttaatttggttgactaaatatattgtattccttactaatttattatgtaagataatgttaattcgaaggatcccttgaa  8220700                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                       --------->ANAC58                                            <---------YAB1                 ----------->TBP                                                  --------->AHL20(2)               <---------------AGL15                                           <---------AHL20(2)              <---------YAB1       ------>ZmHOX2a(1)                           --------->AHL20(2)         <---------ICU4--------->ANAC55(2)         *TSS                        --------->AHL20(1)     <---------YAB1    <---------ANAC55(2)        ------------>CBF             <---------AHL20(1) ---    ------------>CBF   --------->ANAC46        <------------CBF        <---------ARR11(3)    --------   <-----------GT1     --------->ANAC58      <---------YAB1            --------->ARR11(3)  ---------- ---------->GT1--------------->AGL15  ------>ZmHOX2a(1)            ---------->DOF2<---------AHL20(2)   tatagttacaattcttactataaatacgaaacaactcctccttcattctcattgcaatacaaaaatatcaaaagttcttaatattttaattaacaaagaa  8220800                                                                                                <----                                                                                               <-----                                                                                               ------ ------->DOF2        <-----------RAV1(1)             <---------ZAT6     <---------AHL20(2)  <-------- --->GT1 <---------MYB46(3)          <---------AHL20(2) --------------->AGL15       ---------->DOF2 >DOF2   ----------->GT1      <----------DOF2   <----------DOF2       <---------AHL20(2) <----------DOF2   aaaagagagaatggttagaacaaatgttgtctcttttgttttatttgctgctatagtgctatgtataggtatattttttttagtactaaagctttaacct  8220900                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                 ----                                                                                               ------                                                                                              <------                                                                                              -------                                         <---------AHL20(2)                                <---------ALFIN1                                     <---------CCA1(1)                                    <---------ZAT14                                     <---------RVE1(1)                                    --------->ABI4(1)                                    --------->ARR11(3)                                    <---------ABI4(2)                                --------->ANAC55(2)                                       --------->ZAT14                              <-----------GT1                                             <---------SPL7                          <---------AHL20(2)                                             --------->DEAR3(1)                          --------->AHL20(2)                    --------->AtLEC2         xxxxxxxxxxxx                         --------->AHL20(1)                  ------>ZmHOX2a(2)          --------->ANAC58 <---------AtLEC2        <---------AHL20(2)                  <-------TEIL               --------->ANAC58 ------DOF2              <---------AHL20(1)                 <------ZmHOX2a(2)           <xxxxxxxxxxxx ----DAG2                --------->AHL20(2)                <---------ARR14(2)           --------->ANAC46 --->TOE2(3)            --------->AHL20(2) <-----------GT1 --------->ARR14(2)         <---------ALFIN1 ---GT1       <-----------RAV1(1)   <---------ARR11(3)    <------ZmHOX2a(1)           --------->ANAC46   ttttcatgaagttttcatgttgggaaattaatttacatgatattttttctattgaatgtaggatccattcaaatagatggacaaaaacacaccgcaccgt  8221000      <xxxxxxxxxxxxxxxxsmallRNA(s)  ----------->RAV1(2) <xxxxxxxxxxxxxxxxsmallRNA(s) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ---------GLK1(1) ------->ARR14(2) --------ARR14(2)                                <---------ARR11(3) ----->REM1(2)                          <---------ZAT6                    <---------At4g35610 --->LBD16                       --------->TOE1(2)                        <---------ZAT14      <----- ---ANAC46                      --------->HSFB2a(1)                       --------->ZAT14 --------->GLK1(1) -->DEAR3(1)           ----------->GT1  --------->ALFIN1            --------->YAB1        <---------GLK1(1) xxxxxxxxxxx>smallRNA(se3)      <---------HSFB2a(1)         <---------ATHB12         --------->ALFIN1 xxxxxxxxxxsmallRNA(si3)  ---------->DOF2        --------->ARR11(3)<---------YAB1  --------->ALFIN1   ggatacctgaagacaattcgatatgttgtaaagaacatccgagtgttggaagatgtcttccaaacatcgatgatagtgctgagaagggtgggaaatgctg  8221100                          <------ZmHOX2a(1)                       <-----------RAV1(2)                  ----------->HVH21                                            --------->LBD16                ----------->GT1          <----------DOF2                      <---------ANAC46-------                --------->ALFIN1         <---------DAG2                      <---------LBD16  ------- ----HSFB2a(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <-----------HVH21----------->GT1-------   gaagttttgtattgaagggtgtgaaacaggaggtttttgcaaactttttggacataaacatatatgtcattgcaattgttccggttaatatgcatcatgc  8221200                            ----------->GT1                           --------->ANAC58                           --------->ANAC46                <---------TOE2(3)                           --------->ANAC58              ---------->DOF2                       --------->CCA1(2)             <---------AHL20(2)                   --------->SPL7                    --------->AHL20(2)                 --------->TOE1(2)                  <---------YAB1                 --------->TOE2(2)                  --------->ICU4  <---------AHL20(2)--------->ANAC58             --------->AHL20(2)  --------->AHL20(2)--------->ANAC58             <---------YAB1<-------TEIL --------->AHL20(2)<---------TOE2(2)             <---------AHL20(2) -->ANAC58       <---------SPL7                 --------->AHL20(2) -->ANAC58     <---------TOE1(2)                <---------AHL20(1) -->AtLEC2    ------>ZmHOX2a(1)                 --------->AHL20(1)                      --------->MYB52(1)   aaaattaataaggctcctacgtacgatacaaggaaaaatttgtttgaaaatataattaataaaggttcaactacattgttcaaaaatgaataacagattg  8221300  Previous    Next  AGI:  At4g14276.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G52605.1) Range:  from: 8220751    to: 8221188    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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