Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <----------DOF2                                    <---------ICU4                                    --------->YAB1        ------>ZmHOX2a(2)          <---------ATHB12                                            <-----       <------ZmHOX2a(2)       --------->MYB46(3)                                           <------MYB83      <---------ARR11(3)      --------->ANAC46                                              <------MYB46(1)      <---------ARR14(2)   <---------MYB52(2)                                              <---------MYB46(3)      --------->ARR14(2)   --------->MYB46(3)                                             <---------ANAC46      --------->ARR11(3)  ------>MYB83                                                    <--------P      <---------ARR14(3)  ------>MYB46(1)                                                 <---------MYB55(1)     --------->GLK1(1)  <---------MYB55(2)                                <---------TOE2(3)--------->MYB55(2)     <---------GLK1(1) --------->ANAC58                              <------MYB83         --------->ALFIN1   --------->LBD16     --------->ANAC58                              <------MYB46(1)     <---------MYB52(1) ------>P --------->LBD16--------->ANAC46                    <---------bZIP60(2)     --------->MYB52(1) >DOF2--------->ARR14(3)--------->MYB46(3)                 <------ZmHOX2a(1)     --------->MYB59   taacccgagatcccgataatttgacacccactacccaatctttatcttgaacaggtatagaggacatggctaggttatggattttggtaccggtgggtac  8217200                                                                                 --------->ANAC58                                                                     --------->At4g35610                                                                     <---------At4g35610                                                                    <---------MYB46(3)                                                                    <---------DEAR3(1)         <-----                                                                 <---------MYB46(3)---------->DOF2                                                                <---------AtMYB61--------->ANAC58                                                             <-------TEIL        --------->ANAC46              --------->WRKY18(1)           --------->YAB1  <--------P  <---------At4g35610<---------GLK1(2) ----------->GT1       <-----------------AGL2            <---------TOE1(2)      --------->SPL7 ------ --TEIL --------->ATHB12--------------->AGL15            <---------TOE2(2)    <---------SPL7  -------   agaaggtaaatgaatggtcaagttttctagtttgggattggaggtctcataagtgatcacaggttgatggtcgctgcttctgtacgaaagatagaatttt  8217300                 ----------->RAV1(1)                <---------ETT(1)                --------->ANAC46      --------->ANAC55(2)      --------->ANAC58                                                                 <----------DOF2      --------->ANAC46                                                               <---------------AGL15      --------->ANAC58                                      ------>ZmHOX2a(1)        --------------->AGL15      <---------ANAC55(2)                                ---------->ID1          <----------DOF2      --------->ANAC55(1)                            <---------ANAC58           <---------DAG2      ----------->GT1                                <---------ANAC46     <---------MYB46(3)  <-----------HVH21                                  <---------ANAC58     <-----------RAV1(1) --------->WOX13(1)    <---------WRKY38(1)         --------->GLK1(2)   <----------DOF2--------------- ----AHL20(2)--------->ARR14(2)              --------->HSFB2a(2) --------->YAB1<---------ANAC58 --->AHL20(2)--------->GLK1(2)               <---------HSFB2a(2) <---------ICU4<---------ANAC58     < -->YAB1     <---------ARR14(2)           ------>ZmHOX2a(1)--------->TOE2(3)---------->ID1     ------   aatccatcacgtaaaaatccgacagtcatcgcctcaatgacctccttctcgagtttcttgtccttaatagtgacttttgttgcctttccctttgaagaat  8217400                       ------>MYB46(1)                       ------>MYB83                     --------->AtMYB61               <---------ANAC55(2)                                              <------MYB46(1)               --------->ANAC55(2)                                              <---------MYB46(3)      --------->ARR14(2)      >>>>>>>>>TBF1                              <---------MYB52(1)      <---------ARR14(2)  --------->LBD16                        --------->YAB1 <------MYB83   <---------ANAC46 --------->MYB46(3)                           --------->AHL20(2)     --------->ANAC58  <------NtERF2--------->ANAC58                             <---------ATHB12<------MYB46(1) ------>WRI1   --------->ANAC46                           --------->WOX13(1)<------MYB83--------->ANAC58 ---------DEAR3(1) ------>NtERF2                   <---------ANAC46 --------->MYB52(1)<---------At4g35610 --->GLK1(2)   --------->ANAC58               <XXXXXXXXXXXXXXXXXXXXMIR397B<--------P<-----------RAV1(2)   cgtcgtcgtatactattacgcgaccatccgaagaagaattttggatgttagtgatgtattcaatcaataaaaacgggtaggctggttcagacgacaagag  8217500                              <---------ALFIN1                            <---------ALFIN1                        <---------ARR14(2)                   --------->At4g35610               <-----------HVH21      <---------ANAC58               <-----------TGA1--------->MYB46(3)              --------->bZIP60(2)     <---------ANAC58              <---------bZIP60(1)     <---------ANAC46              --------->bZIP60(1)  <----------DOF2           --------->TOE2(2)       --------->ZAT14  --------->ARR14(2)                   --------->TOE1(2)        ------>NtERF2      <----------DOF2   <-----------ARR10       <---------REM1(1)    ----------->RAV1(1)  <----------   ttgagtcactttagtctcgtcatccgaatcccacccgcttgtgtgagaagttgtagatgagaacatacgaacaacatttttgtgtctctgccatatatat  8217600                                                    <---------AHL20(2)                                                    <---------AHL20(1)                                                    --------->AHL20(2)                                                    --------->AHL20(1)                        --------->YAB1            ------->TEIL                                    --- -TBP              ------------>CBF   ---------->DOF2                     <------ZmHOX2a(1)  --------   gttcaagtagtcagagacgatatcaataacaagaagaagttaaagaaaaatgaatttattacttagaagcttaagaggaagtttttgcagacagagggtt  8217700                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                   --                                                                             --------------->AtSPL8<-                                                                             <---------------AtSPL8--                  --------->At4g35610                                       <------------CBF       <-       --------->At4g35610                                                 --------->ATHB51       ---       <---------At4g35610                                      --------->GLK1(2)      --------->ZAT6   xxxxxxxxxxxxxxxx>smallRNA(i)                      <---------CCA1(2)     --------->ATHB12       <--  xxxxxxxxxxxxxxxx>smallRNA(s)                     <---------ANAC58        <---------ICU4     ------- ------->DOF2--------->YAB1            <----------DOF2  <---------ANAC46  --------->ICU4   --------->YAB1 --->GT1    <---------YAB1<------------CBF         <---------ANAC58       <---------YAB1--------->YAB1   taaagactcggctgattataagctgtgccattgttgaacttctttaagtgttttcgtctcttgtataatctgtgtcattattgtacttaatactaataag  8217800 <---------YAB1                                                     --------->TOE2(3) -------->ARR14(2)                                                <---------ARR11(3) ---------ARR11(3)                                             --------->AHL20(2) -------->ARR11(3)                                ----------->TBP --------->ARR11(3)---------->ID1 ---------ARR14(2)                              --------------->AGL15         <---------YAB1 ------->KAN4(1)                                <---------------AGL15      <---------YAB1 --------GLK1(1)                               ----------------->AGL3     <---------AHL20(2) ------->GLK1(1)                  --------->GLK1(2)        ----------->GT1--------->AHL20(2) --------KAN4(1)              --------->YAB1   <-----------------AGL3     <---------AHL20(1) ------->TaMYB80    --------->ANAC58           ----------------->AGL2    --------->YAB1      <------- -------KAN4(2)     --------->ANAC58           ====================================================== -->YAB1            --------->ANAC46           <-----------------AGL2   <---------YAB1      <--------   aatatccttgctcagcaagtacaagacataaatgagaatatttagaaattccataaatagctcgttaaaatcttattataatttttgtttttttctgtgg  8217900                                        --------->AHL20(2)                                     --------->YAB1        ------>ZmHOX2a(1)                                <---------AHL20(2)        --------->TOE2(3) --LBD16             <---------------AGL15 --------->ARR11(3)                                   <---- ====================================MADS_MADS      <---------ICU4                         <--------- -ANAC46            ----------------->AGL3 <---------ARR11(3)                  <-----------GT1  <----   aatttgttgttcaatatttgttcccaaaaattgttttattcataaaatctaaaatcatttcctaaaatcaatgcatacaaattactctatattctaccct  8218000                                                        <-------MYC3                                                        ------->MYC2                                                        ------->MYC3                                                     <---------ALFIN1                                                     ------->GAMYB                                                    --------->MYB46(3)             <----------DOF2     <---------AHL20(2)                        --------->ANAC58                  --------->At4g35610     --------->AHL20(2)                        --------->ANAC58                  <---------At4g35610 ------DOF2             <---------YAB1   <----------DOF2<-------MYC2         <----------DOF2 --GT1                  <---------AHL20(2)     --------->AtLEC2           <-----------GT1   <-------- -----DAG2 <-----------GT1 <---------WOX13(1)  --------->ANAC46 <---------AHL20(2)--------->TOE2(3) <   tttttttttaatttttcgatatgtttttaattgaaacagaaaacttttcatgcaaccacgttcgattttttttttttttctttagcttaatgggcttatg  8218100  Previous    Next  AGI:  At4g14260.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25920.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 8216316    to: 8217566    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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