Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------ANAC58                                                ===========================MYC_MYB                                                ======================bZIP_DOF                                                --------->O2                                     ----                                                <---------O2                                     <---                                                <---------TGA1a                                  ----                   <---------ZAT2               --------->TGA1a                                  ----       --------->REM1(1)                        <---------ANAC46                              <------      ------>MYB83 <---------At4g35610          <---------ANAC58                              <------      -------->P   --------->ZAT2  ----------->GT1                     --------->ANAC55(2)    <------      ------>MYB46(1)            <---------ANAC46                      <---------ANAC55(2)    <------ ----->YAB1        --------->At4g35610        <-----------HVH21     <---------MYB52(1)      <-------- -----YAB1        ------->TEIL   <---------ANAC58          ---------->DOF2        --------->ANAC58 -->YAB1       <---------REM1(1) <---------ANAC58 --------->ALFIN1 <-------GAMYB  --------->ANAC58   catagacctacaacaagatgaagctggacttgatggcttgaaaaacagcgtcgtgtggccataaatctcggttaagtaagtgagaagcaaactcggtcgt  8212800                          ==================HOX2a_HOX2a                          ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                         ===================HOX2a_HOX2a                        --------->AGP1                        --------->ARR11(3)                        <---------GLK1(2)                        <---------ARR14(2)     <---------MYB46(3) --------->ARR14(2) ----->ZAT18            <---------ARR11(3) ------ZAT14          ----------->ARR10 ----->WRKY38(1)   --------->YAB1                                                                ---- ----->WRKY12      --------->TOE2(3)        <---------ANAC58      <---------LBD16            -------- ---ANAC46        --------->MYB46(3)        <---------ANAC58      --------->LBD16           <-------- ---MYB46(3)     -------->P ------>ZmHOX2a(1)<----------DOF2     <---------ANAC46           --------- ---ANAC58   --------->ANAC58        <------ZmHOX2a(1)         ------->TEIL               <---------- ---ANAC58   --------->ANAC58   --------->HSFB2a(2)           --------->MYB52(1)         <------ZmHOX2a(1) ---HVH21    --------->ANAC46   <---------HSFB2a(2)         <---------MYB52(2)        <------ZmHOX2a(1)   ggactggaggttaacaagcaaccatagatcctctctagaggacgttgctttcgcatcttcaaacgaaccgtggaaaaacagacttggaggaggacggtac  8212900                                                  ===============HOX2a_HOX2a                                                  ------>ZmHOX2a(2)                                                 ================HOX2a_HOX2a                                                 --------->GLK1(1)                                                 <---------GLK1(1)                                                 <------ZmHOX2a(2)                                --------->ETT(2)--------->ARR14(2)                           --------->At4g35610  <---------ARR14(2)                           <---------At4g35610  <---------ARR11(3)                         <-----------RAV1(2)    --------->ARR11(3)                        ------>ZmHOX2a(1)       <---------AGP1                        ================================HOX2a_HOX2a                        =================================HOX2a_HOX2a                       --------->TOE2(3)        --------->AGP1                    --------->GLK1(1)          <---------CCA1(2)                    <---------GLK1(1)        --------->HSFB2a(2) ------>DOF2       --------->ARR14(2)    <-----------HVH21 ->At5g28300       <---------ARR14(2)    <---------SPL7                            <----------ARF1 -DEAR3(2)    --------->GLK1(2) <---------ETT(2)<-----------ARR10              <---------ANAC46  ---- -->GT1      <---------GLK1(2) --------->DDF1<---------HSFB2a(2)   ----------->HVH21      ---------->DOF2 -----------WRI1   <---------GLK1(2)  <-----------HVH21   <------ZmHOX2a(1) --------->ALFIN1  <------ZmHOX2a(1)   aaagaagacaacctagaatcggattcctcagatgtcgactcgtcgtcccagatctcttcaggacatactgcgaccgaagtgttgtgagacatgaaaggat  8213000                             ---------->DOF2                         <---------TOE2(2)                                                          -                         <---------TOE1(2)                    --------->ICU4                    <----             <---------ARR14(2)               <---------ARR11(3)       <---------GLK1(1)       <----- -->ZmHOX2a(2)    <<<<<<<<<TBF1<---------TOE2(3)              <---------YAB1            ---------->DOF2   cgtagtcgtagagagtattcttcttcgaaggtaaaggaagagggactagttcttctccatggtgatgatgagggtttctccgagcgatgagaaagaggtt  8213100                                                                   --------->At5g28300                                                                  ----------->GT1                                                               --------->MYB52(1)                      <-------GAMYB                            <---------DOF5.7(2)                     <---------MYB46(3)                       <---------WRKY38(1)        <------ZmHOX2a(2)                     --------->MYB111(2)                     --------->DOF5.7(2)         ============                     --------->MYB55(2)<-----------RAV1(1) <------MYB46(1)       --------->ICU4                <-----------RAV1(2)    --------->ALFIN1    <------MYB83        ---------->DOF2 ----->ZmHOX2a(2)   <--------P --------->ANAC46           --------->MYB59     <------ZmHOX2a(1) ---TEIL  <---------TOE1(3)    --------->ANAC58         <---------MYB52(1)    ==================HOX2a_HOX2a ---P     <---------TOE2(3)    --------->ANAC58--------->GLK1(1)<---------------------WRI1          <   gatcgcatcttcaaggttccaggttgttgcctcaaggaactgtgttgcgatttccacagtttggttaacggtgatatcgaggaaagatgagatcagtttt  8213200             ------>ZmHOX2a(1)    <---------MYB46(3)    <------MYB46(1)    <------MYB83   <---------MYB46(3)                 <---------ANAC46   <---------AtMYB61                ------>ZmHOX2a(1)                    <---------PCF2  <---------MYB52(1)              <---------ANAC46           --------->ANAC58 <-------GAMYB                    <---------ANAC58           --------->ANAC46         <---------YAB1 ===================HOX2a_HOX2a   <---------ANAC58           --------->ANAC58--------->TOE2(3) -----------RAV1(1)     >>>>>>>>>>>>>>>>>LFY     <---------------------WRI1  --------->TOE1(3)  -----   ctctgttggtgagtcctcgttgcagtctccattgtttcctgtgtgtaagagagcgagagaaacaaggaatttgtgggaaccctaaattacgaatggaagt  8213300                                                                 <----------DOF2                -----               <---------ANAC58                                  <---------DAG2              <-------               <---------ANAC58                      --------->ARR14(2)                   ------->GAMYB           <----------DOF2                 <------ZmHOX2a(1) <-----------GT1          <---------WRKY12          --------->TOE2(3)       <---------AHL20(2) <---------ARR14(2)               <---------WRKY38(1)       <-----------GT1          <-----------TBP      <---------GLK1(2)     ------------>CBF  -------- ---->ALFIN1  <------------------------ANAC81    ------>ZmHOX2a(1)     ------>ZmHOX2a(1) --------->ANAC46   gtttgtgttttacctttgcttctatttgtttagtatttatagagaggactcctcagatttgtgtttccttttcctactccaattttgttcaacgcagagg  8213400                           <---------DAG2               --------->HSFB2a(1)        ---------->DOF2    <----------DOF2         --------------->AGL15 --------->ANAC58      ---------->ID1             --------------->AGL15           <----------DOF2 --------->ANAC58   <----------DOF2            <-----------GT1                   <---------DAG2 --------->ANAC46   <---------DAG2         <---------ARR11(3)                    <----------DOF2 ---->PCF2     <---------HSFB2a(1)         --------->ARR11(3)            --------->ATHB12 --At4g35610   <---------HSFC1(2)          <---------AHL20(1)         <------------CBF ->At4g35610   --------->HSFC1(2)          --------->AHL20(1)   <---------------AtSPL8        <------   cccacgaaaaaaaaggaaactccttttcgctttttgtttttgtgatatatttccattttttgggattttgtacattgtttgggccttttgggtttacttt  8213500                                                                      ----------------------->TaNAC69(2)                                                                      <-------GAMYB                                                                     ----------->GT1                                                                     --------->MYB55(2)                                                                     <---------MYB46(3)                                                                  <------MYB83                                                                  <------MYB46(1)                                                                 <---------MYB46(3)                       ----------->GT1                           <---------AtMYB61                      ----------->GT1                           <---------WOX13(1)              -----                    --------->DAG2              --------->ZAT6--------->ATHB12         <---------DAG2    <----------DOF2---------->DOF2       <---------ZAT14     <---------YAB1            <----------DOF2 ----DOF2      --------->AHL20(2)    <------ZmHOX2a(1)    <-----------GT1   --------->ANAC46<--------   tatattctttttggtgattaaaaaagggtaaaaaaacaaggacttcacaaacactaggttttactgattggtggttacacaaaacactgctttttttccg  8213600                           --------->ANAC58                           --------->ANAC58                            <-------TEIL                           --------->ANAC46                     <-----------GT1                <----------DOF2        ----------->GT1       --------->ARR14(2)               <---------ANAC58      ---------->DOF2         <---------ARR14(2) ---->LBD16    <---------ANAC58  ---------->DOF2        --------->ANAC58           -------->HAHB4 ---GT1   <----------DOF2 <---------------------WRI1    --------->ANAC58          --------->ICU4   aatcaaactctgcttttgcttctctgcaaacgaaacaaagaaagtgaattggggacacaagcgaatttacaaattcatatgctaattatcgaggctcagt  8213700  Previous    Next  AGI:  At4g14250.1    Description:  UBX domain-containing protein. similar to UBX domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G59550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46719.1); contains InterPro domain UBX (InterPro:IPR001012); contains InterPro domain Translation protein SH3-like (InterPro:IPR008991); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain UAS (InterPro:IPR006577); contains InterPro domain UBA-like (InterPro:IPR009060); contains InterPro domain Ribosomal protein L2; (InterPro:IPR002171) Range:  from: 8208980    to: 8213232    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g14251.1    Description:  unknown protein Range:  from: 8213696    to: 8213878    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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