Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ZAT2                       --------->ZAT2                       <---------At4g35610        --------->ANAC46                       --------->At4g35610        --------->ANAC58           ----------->GT1                        --------->ANAC58                                  <           --------->LBD16                    --------->YAB1                                       --          ------->GAMYB----------->RAV1(2) --------->WOX13(1)                                     <--         <---------LBD16               --------->WOX13(1)                                   ---------        -------->P   <-----------RAV1(2) <---------ATHB12                                  <---------ATHB12        --------->MYB52(1)          ------------------------>ANAC81               ---------->DOF2 ---      --------->MYB46(3)         --------->AHL20(2)              --------->YAB1--------->ANAC46  ----   gtttctgaacaaccggaaaaatcgcagctgagaaaaaaaatcaatcaatcgcaagcaaattccacaatcacagcaaaattcacacaaagtcaaatgatca  8202800                                                          ---------->DOF2                                --------->YAB1          <---------ANAC55(2)       --------->YAB1          <---------YAB1           <---------YAB1    <---------GLK1(2)       ======================HOX2a_HOX2a -------TEIL                ------>ZmHOX2a(1)           --------->ANAC58 ------->CCA1(2)           <---------ANAC46   ----------->TGA1                   <---------GLK1(2) -- -------ARR14(2)           --------->TOE2(3)  ----------->HVH21      <------ZmHOX2a(2)             <- >YAB1<-------TEIL --------->ANAC58        ------>ZmHOX2a(2)       <------ZmHOX2a(1)               -- ------>ARR14(2)   --------->ANAC46        ===============================HOX2a_HOX2a              <- ----->At4g35610   --------->ANAC58     --------->ATHB12--------->ANAC58   <-----------GT1    <------   gatacagattcatatcaattcaagcaattccttataatcaattgatcggtgacgaattacgaaagagaaggatcaatttaccagattgtttcttctcttt  8202900                   <---------ARR14(2)                   --------->ARR14(2)                  <---------GLK1(2)            <---------MYB52(1)                                                 <---------------------WRI1     --------->ZAT6--------->GLK1(2)                                          ------>NtERF2     <---------ALFIN1                                                         --------->LBD16 ------------->AtSPL3                                                        <---------LBD16 --------------AtSPL3                                   --------->DAG2      <---------LBD16 ------------->AtSPL8           --------->ANAC46       ---------->DOF2  <---------ICU4     --------->ANAC58 --------------AtSPL8     --------->At4g35610    --------->ANAC58      --------->ICU4      --------->ANAC58 ----DOF2  <-------GAMYB  <---------At4g35610    --------->ANAC58    --------->YAB1   <----------ID1   tggagtaccactccgttggagaatctcgagctcaacgagaccgagagacataagccctaaagtgagaccagacataattccggcgaagagaacaaggaaa  8203000                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                -----                                                                                                -----                                      --------->ANAC58                                          <----                                      --------->ANAC46                                         ------          <---------ANAC46          --------->MYB52(1)                                         ------        ------>NtERF2           <------ZmHOX2a(2)                               --------->LBD16------        --------->LBD16    --------->ANAC58                                     ------>NtERF2  ------       <---------RAP2.6(2) --------->ANAC58                                    <---------RAP2.6(2) --       <---------LBD16   ---------->DOF2                                <---------WOX13(1)  ---------      <---------LBD16   <---------ATHB12            <----------DOF2   <---------WRKY18(1)   <--------    --------->GLK1(2)  --------->ANAC58  <---------GLK1(2)          <---------WOX13(1)     ------>ZmHOX2a(1)    <---------ARR14(2) --------->ANAC58  --------->ARR14(2)    <---------MYB52(1)    ----------->ARR10    --------->ARR14(2) --------->ANAC46  <---------ARR14(2)  <---------ANAC58  <---------ANAC46------   <---------GLK1(2)------>ZmHOX2a(2) --------->ANAC58       <---------ANAC58 <---------LBD16 -------   caagagattccggcgtaagtgatccactcaagcgatccaaacggaatcgcctcgctttgtaaggcgttagattgactgattccggctaacatcctcgccg  8203100    --------->DEAR3(1)   --------->ANAC46 ------->GAMYB --------->AtMYB61 <---------ALFIN1 ---------ABI4(2) ---------MYB52(2) ---------MYB55(2) -------->MYB46(3) ------->ANAC58 ------->ANAC58 ->NtERF2 ---->LBD16 --NtERF2                                                                 <---------CCA1(1) --->RAP2.3(2)                                                            <---------RVE1(1) --->RAP2.6(2)                                                           <---------ARR11(3) --->DEAR3(1)                                                            --------->ARR11(3) --->ANAC46                                                      <----------DOF2 ------>P                                                     ------>NtERF2 >ANAC46                                                     --------->ANAC58 -DEAR3(1)                 ---------->ID1                    --------->DEAR3(1) --->RRTF1(2)       ------->TEIL     <---------ARR11(3)      --------->ANAC58               <-------- -->RAP2.3(1)     <-------TEIL      <---------CCA1(2)     ----------->HVH21   <-----------GT1 -------   caaccaccgcattaatcggatgcatcttcgtcgtctctatatctatctgtttgcaattttccgacgcctttcttagatattttctcgtctaattttgttg  8203200                                 *TSS                                <------NtERF2                              --------->ETT(1)                              <---------ANAC46                              <---------DEAR3(1)                             --------->ALFIN1                      --------->MYB52(1)                      ------>MYB83      <-----------GT1                                           ---     <---------ARR11(3)      --------->ATERF1(1)                                           <---------TOE2(3)     --------->ARR11(3)     <-----------HVH21                                <------MYB83  <---------YAB1    <---------CCA1(2) ------>MYB46(1)<---------------AtSPL8                  <------MYB46(1) <------- ---RAV1(1)         <---------MYB59  --------------->AtSPL8   <---------ARR14(2)          <---------- --->ID1           ----------------->AGL1------------>CBF     --------->ARR14(2)    <XXXXXXXXXXXXXXXX   ttttttatatctctctcatcgacctaatggggtcggggttttgtacaattttgaattcttagcatatacagcaaatatttggttttgttttttaacattg  8203300                                                                                --------->ANAC55(2)                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                           <---------------AtSPL3                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                     --------->ARR11(3)                                                                     --------->ARR14(3)                                                                     <-----------ARR10                                                                     <---------ARR11(3) ------->TEIL                                                                     <---------ARR14(3) --------->ARR11(3)                                                                    =============================HOX2a_HOX2a                                                                    <------ZmHOX2a(1)   --------->ARR14(2)                                                            <-----------RAV1(1) --------->ANAC58                                 <----------DOF2            =====================================HOX2a_HOX2a                                 <---------DAG2             =================HOX2a_HOX2a<---------ARR14(2) ------------>CBF            --------->ANAC46               ------>ZmHOX2a(1)  <---------LBD16 ------>PCF5               <---------ALFIN1            <---------MYB46(3) <------------------SPL14 -----CBF               --------->ARR14(2)         <-----------RAV1(1)<------ZmHOX2a(2) <---------AGP1 -GT1 <---------ARR11(3)<---------ARR14(2)<----------DOF2   ==================HOX2a_HOX2a ------>ZmHOX2a(2) XXXXXMIR833-3P    <-----------GT1    <----------DOF2 <---------AtMYB61------>ZmHOX2a(2)<---------ARR11(3)   gtccccaatatgttttatatttttcaaatccacccctttactttcttttttttctggtggtcctggtgcaggatcttcttgtacggaatggatcttatac  8203400                                                                       <---------CCA1(1)                                                                       <---------RVE1(1)                                                                      <---------GLK1(2)                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                  --------->ANAC46                                                              <---------At4g35610                       <---------ARR14(2)                 <-----------HVH21                       --------->MYB52(1)                --------->bZIP60(1)                     <---------ARR14(2)                  <---------bZIP60(1)                     --------->ARR14(2)                <---------At4g35610             <----------DOF2                           --------->At4g35610        <---------ALFIN1       ----------->GT1  <---------YAB1--------->At4g35610   aatctgacaaacaccctttagcgaatatcggaattgtatatttcaaatgtgtgattgtgctgtcatctacgagattttttgttttttgttttttaacatg  8203500                                       --------->DEAR3(2)                                       --------->ATERF1(1)                                     --------->ARR14(2)                                     <---------ARR14(2)                                   --------->LBD16                                  --------->ANAC58                                  --------->ANAC58                                  --------->ANAC46                             ----------->HVH21  --------->At4g35610                           <---------ICU4  <---------ANAC58             --------->DAG2                          ------>ZmHOX2a(1)<---------ANAC46      <---------DEAR3(1)               --------->ZAT18    --------->ANAC55(1)--------->GLK1(1) ---------->DOF2          <----               <---------ZAT18   <---------LBD16<---------At4g35610 <---------ANAC46    --------->WOX13(1)   --------->ALFIN1   --------->ARR14(2)   <---------ANAC58  <-------TEIL    <---------CCA1(2)  <----   gaggggtttgggccttgggccctagttcctcatgacccggaaccggcttgtgctgatatcaaatacatcggcgtaaagcatctcttctatcaatcgagta  8203600                                                                                     <-------MYC2                                                                                     <-------MYC3                                     --------->ANAC58                            <---------At4g35610                    --------->AHL20(2)                                     <---------STY1(1)<--------         --------->ARR11(3)          --------->ANAC58                <----------DOF2 ------->MYC2 ---TEIL <---------ARR11(3)<---------MYB52(1)                     <---------ALFIN1   ------->MYC3 --- -----ZAT14   --------->AtLEC2  --------->ZAT14         --------->TOE2(3)  --------->STY1(1)---------   cattggtctaatatccctgcaataaaaccattagttcagacgaaaaaaaaaaaaaaaacattagttcaacactttccctagggagcacatggactacact  8203700  Previous    Next  AGI:  At4g14230.1    Description:  CBS domain-containing protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71090.1); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644); contains InterPro domain Protein of unknown function DUF21 (InterPro:IPR002550) Range:  from: 8200662    to: 8203233    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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