Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------DAG2   ------>ZmHOX2a(2)                    --------->TOE2(3) --------->ARR11(3)                   ------>MYB83 <---------ARR11(3)                   ------>MYB46(1)           --------->GLK1(2) --------YAB1                        <---------ALFIN1           --------->ARR14(2) ------ICU4                         --------->MYB46(3)  --------->ATERF1(1) ----->YAB1                         ------->GAMYB      ------>NtERF2 ---->ICU4                        >>>>>>>>>MYB98    ------->GAMYB            <----------DOF2 -->YAB1                      --------->TOE1(3)  --------->MYB52(1)   <------ZmHOX2a(2) --YAB1                   --------->ARR14(2)     <-----------GT1<---------ARR14(2)        --------->ANAC46   catgatcttccttctcgtgattcccaagtataccctaacccaccttatatttaacggagccatccgaatccgatcgaaactttgtggaatacacacattt  8195500                                              <---------ARR11(3)                                      --------->ARR11(3)                                           <-          <---------ANAC58            <---------ARR11(3)        --------->ANAC58                  <--          <---------ANAC58           --------->GLK1(1)          --------->ANAC46              ------>ZmHOX2a(1)          <---------ANAC46           <---------GLK1(1)       <---------ALFIN1             <---------ARR14(2)   --------->MYB46(3)           ----------->GT1    <---------MYB52(1)                     --------->ARR14(2)  >>>>>>>>>>>>>>>>>LFY         --------->ALFIN1  ----------->GT1--------->ANAC58         <---------GLK1(1)   gtacaaccagtggcttgtttattcggtgagagagtggtgatatctcaagttctgttatatgctccaacgcatcaacttctgttcccattgcatttcctcc  8195600                     <---------MYB52(1)                   <------MYB46(1)                   <------MYB83              <---------DEAR3(2)                                            <-------TEIL              <---------MYB46(3)                                           >>>>>>>>>>>>>>>>>LFY              <------MYB46(1)                                            <---------ANAC58              <------MYB83  <---------ARR14(2)                     <------ZmHOX2a(1)             <---------DEAR3(1)       <---------At4g35610        --------->LBD16            <--------P     <---------GLK1(1)                    <---------LBD16           <-----------HVH21--------->ARR14(2)    ==========================RAV      <---------At4g35610       <---------LBD16     --------->GLK1(1)      ----------->RAV1(1)    <---------ANAC58 ----------ARR10  --------->MYB59 --------->ARR14(2)            <-----------RAV1(2)  --------->At4g35610 -------CCA1(2) <---------MYB52(1)<---------ARR14(2)--------->ANAC46    --------->MYB59----------->TGA1   aaatctcttctcgggtcggttcggtttggatatccgattccgcttagtttgcccacataatttagcccaggaattgggtccattgtctgatgacgaagta  8195700                   <---------ZAT14        --------->YAB1                                 ------>ZmHOX2a(1)                   <---------ZAT18       <---------YAB1                        <---------ARR14(2)                   --------->ZAT18     --------->YAB1                          --------->ARR14(2)                   --------->ZAT14     <---------ICU4                         ------>MYB46(1)            --------->ZAT6            <---------ATHB12         --------->AHL20(2)       <---------ALFIN1      --------->GLK1(2)             --------->WOX13(1)         <---------AHL20(2)     ------>ZmHOX2a(1)     <---------GLK1(2)       ---------->DOF2       ----------->GT1            ------>MYB83   tgttttagaatctaaaactagtggacttaaacaaagcccaatcataataagttgtgtaacaaattttaaatataaaaaccaaatactcctcctccttgca  8195800                        <----------DOF2                       <---------ANAC58                       <---------ANAC58             <---------DAG2     <-----------HVH21           <----------DOF2                 <--------             <----------DOF2 <---------ANAC58     <---------DAG2                            XXXXXXXXX          <-----------GT1    <---------ANAC58     <----------DOF2                    --------->WOX13(1)    <----------DOF2<----------DOF2               <---------DAG2             *TSS   <---------ATHB12 <   ttttctcttttttgacttttcctttgctttgacttgtcagtcttctcttccccttttctcttcttttttttttttgatcaaacaaatcaatctcacacct  8195900              <<<<<<<<<TBF1                           <---------ICU4           <<<<<<<<<TBF1                             <---------ATHB12      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        --------->WOX13(1)     <<<<<<<<<TBF1                              --------->TOE2(3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->ARR11(3)  <<<<<<<<<TBF1  <<<<<<<<<TBF1                <---------ARR11(3)           <<<<<<<<<TBF1 -ALFIN1<<<<<<<<<TBF1  <<<<<<<<<TBF1         <---------GLK1(2)          <<<<<<<<<TBF1 XXXXXXXXXXX>MIR847 <<<<<<<<<TBF1       --------->TOE2(3)    <---------GLK1(2)  <----------DOF2   --- xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------CCA1(2)--------->YAB1------>ZmHOX2a(1)          ------   cttcttcttcttcttcttcttcttcttcttcaacctcttaaatctcaaaatctcaatcatcaagcttctccttcttcttcttctttccatcttcgcttca  8196000                                                               ------>NtERF2                                                               --------->LBD16                                                               >>>>>>>>>>>>>>>>>LFY                                                     <----------DOF2 <---------MYB46(3)      --------                                         <---------ETT(1)     --------->ANAC58               ------>NtERF2                                         --------->ANAC46     --------->ANAC58             <---------LBD16                                         ----------->HVH21    --------->ANAC46      <<<<<<<<<TBF1 ------>MYB46(3)             <----------DOF2        <---------DAG2 <---------MYB52(1)     ------>ZmHOX2a(1) --->REM1(1)            <---------At4g35610     ------->GAMYB<---------LBD16  ---------->ID1 <-------   acaacaatgtctaatttcacttatacatctgctttcaacttatccgacaactccccttttaatcccgccattggttcttcgtcttcttcttcctccgcgc  8196100                                                                                         --------->GLK1(2)                                                                                        <---------GLK1(2)                                                                             >>>>>>>>>>>>>>>>>LFY                                                                          ------>ZmHOX2a(2)                    --------->YAB1                                        --------->HSFB2a(1)                 --------->YAB1                                           <---------HSFB2a(1)                <---------YAB1                                            ===========================              --------->YAB1                                              --------->HSFC1(2)             <---------ATHB12                                             <---------HSFC1(2)      <---------ANAC58                                                   ============================      <---------ANAC58 -------->HAHB4                                    <------ZmHOX2a(2)     --------->HSFC1(2)<---------ICU4                                   <---------ARR14(2)     --------->ZAT2<---------YAB1                                       --------->ARR11(3)     <---------HSFC1(2)--------->YAB1        <---------At4g35610        <---------ARR11(3)     <---------At4g35610                     --------->At4g35610        --------->ARR14(2)  <--------     --------->At4g35610            <---------ANAC58                   <------ZmHOX2a(1)--------->ARR14(2)     --------->HSFB2a(1)            <---------ANAC58                 --------->LBD16    <---------ARR14(2)    <---------TOE1(2) <---------YAB1<---------ANAC46             --------->ANAC46      <---------At4g35610 ->LBD16     --------->ICU4       <---------YAB1                --------->MYB46(3) <-----------HVH21 --ZAT18   <---------At4g35610 <---------ATHB12              <-----------GT1------>ZmHOX2a(1)   <----   tcgtcgtagcttccgatgatgataataataccgatgatgcttgtagcatctgtctcgagcctttcaccctccaggatccttccactgtcagattctttta  8196200                                             --------->GLK1(1)                                            <---------ARR11(3)                                            --------->ARR11(3)                                         <---------TOE1(3)                                         <---------TOE2(3)                                        <-----------GT1       <---------DAG2                <----------DOF2 ---------->ID1              --------->TOE1(2)<-- ------>ZmHOX2a(1)              <---------LBD16   ------>ZmHOX2a(1)      <---------ANAC58     <------ =======HOX2a_HOX2a            <---------LBD16------>ZmHOX2a(2)     <----------DOF2           ------- =======HOX2a_HOX2a        <---------ARR11(3)<------ZmHOX2a(2)      <---------DAG2            <------ --DOF2<----------DOF2     --------->ARR11(3)<---------GLK1(1) <-----------GT1<---------GLK1(1)   <-- -------GT1 <------------------------ANAC81------->GAMYB <----------DOF2 <---------ANAC58--------->GLK1(2)   atcctctctctttttgtttttgtctataagctcttcggggtttaacgatctccttctcgcttttatttcgcttttacttgaaatctgggataatcggatt  8196300          <---------RVE1(1)          <---------CCA1(1)   <---------ANAC58   <---------ANAC58   <---------ANAC46                  ------>ZmHOX2a(2) -------ANAC58                      <------ZmHOX2a(2)                                          ------ ---GLK1(2)                        --------->ARR11(3)                                        ------>ZmHOX2a(2) -->ARR14(2)                       <---------ARR11(3)<------ZmHOX2a(2)                  <---------WOX13(1) ---ARR14(2)                 <-----------GT1  <-----------GT1              --------->WRKY12  ======== -------ANAC58            --------->YAB1    <---------WOX13(1)      --------->MYB46(3)--------->ATHB12   ttgtgccttgcgatattttgactcagattaataacgagatcgtttgattaactcgatcacttgttcttgaaccatcgttgaacatgtttgattgatcctc  8196400  Previous    Next  AGI:  At4g14220.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to CIC7E11, protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G22000.3); similar to CIC7E11, protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G22000.2); similar to CIC7E11, protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G22000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71115.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 8195876    to: 8198557    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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