Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->SPL7                                                                                     ------->TEIL                                                                                   <---------SPL7                                                                                  <---------TGA1a                                                                                  ===================                                                                                  --------->TGA1a                                                                                  --------->ANAC58                                                                             ------>MYB83                                                                             ===============MYC_MYB                                                                             -------->P          ----                                                                             ------>MYB46(1)    <----                                                                            ------>ZmHOX2a(1)   <----            --------->ZAT18                                            --------->KAN4(2)        <----   <---------ATHB12                                                   <----------TaMYB80       ------  ------>MYB46(1)                                                     <---------KAN4(1)        ------  ------>MYB83                                                       <---------ARR14(2)        ------ --------->WOX13(1)                  <<<<<<<<<MYB2                   --------->ARR14(2)      <------- -------->AtMYB61            <---------ARR11(3)                      ---------->TaMYB80----------->GT1 ----->ANAC58                --------->GLK1(2)                      <---------CCA1(2)<-------TEIL---- ----->ANAC46       --------->ARR11(3)      <-----------HVH21     ----------->GT1 --------->ANAC46--- ----->ANAC58   ---------->DOF2--------->ATHB12--------->WOX13(1) <---------ANAC46--------->ANAC58---   caccaatccataagtccccaaagaactacataatctttggttttctcgtcaatccaaaacacagggtctcgtatattcctacccacgtacggtttatacc  8175300       <------MYB83       <------MYB46(1)      <---------DEAR3(1)      <---------MYB46(3)      --------->MYB46(2)      <---------AtMYB61      --------->MYB111(2)      --------->MYB55(2)      --------->MYB111(1)      --------->MYB52(2)              --------->MYB52(1)     <---------MYB55(1)              ----------->HVH21     <--------P                    <---------bZIP60(1)    <---------MYB52(1)             --------->bZIP60(1)  --------->ANAC58                 <---------ANAC58  --------->ANAC46                 <---------ANAC46  --------->ANAC58                 <---------ANAC58 =============MYC_MYB              <---------ANAC55(2) ------->HVH21                     --------->ANAC55(2) -----MYB59                   <---------AtLEC2 -----MYB46(2)                <---------ANAC58 -----MYB111(1)               <---------ANAC58                                                ------- --->ANAC55(2)            <---------ANAC58                                             --------->YAB1 --->ANAC46               <---------ANAC58      <---------ICU4                         --------->ATHB12 ----------->AGL1      ----------->HVH21      --------->GLK1(2)                     --------->WOX13(1) ----GT1             ------>ZmHOX2a(1)--------->SPL7                 <------ZmHOX2a(1) <---------ICU4 ----->MYB55(1)      <---------At4g35610--------->ANAC58             ====================HOX2a_HOX2a --->MYB46(1)        --------->At4g35610--------->ANAC58     --------->ARR14(2)   ------>ZmHOX2a(2) --->MYB83  <---------YAB1<---------ANAC46    <---------ARR11(3)  <-----------RAV1(2) <---------ATHB12   taacacggtaggtgctaattgtcctctgacttgcatggcgtaacgcataatctttccacaataaatctgcaggaggtagactgatccaatcatgggtaaa  8175400                             =================HOX2a_HOX2a                             ------>ZmHOX2a(2)                                                     <-                            <---------GLK1(1)                                                      <-                   --------->ANAC46                                                                <-                   --------->ANAC58                                                          <-------                <------ZmHOX2a(2)                                                            --------                ==============================HOX2a_HOX2a                                    --------   <-----------GT1 --------->ANAC58                                                          <-------  <-------TEIL --------->ARR11(3)      <------ZmHOX2a(1)   --------------->AtSPL3            -------- --->DOF2      <---------ARR11(3)<---------------AGL15 --------->At4g35610           ------>ZmHOX2a(1)   gagattcacaatatagagatcacaccatcgatctcccataaggagccaacttccatgagttgccctacaaacactctttgtaaattcctcaccaaaatct  8175500 --------ANAC58 --------ANAC58 --------ANAC46         ------>ZmHOX2a(1) <---------AtLEC2 --ARR14(3)             <---------LBD16------->MYC2              --------->LBD16 ->ARR14(3)      <----------DOF2       <-------MYC3             <---------LBD16                    -- ->ARR11(3)   <---------ARR11(3)       <-------MYC2            <---------LBD16         ------->TEIL<- --ARR11(3)<----------DOF2             ------->MYC3            <---------ANAC46     <---------ATHB12 ->GLK1(2) <---------DAG2<---------LBD16 <-------TEIL         <---------LBD16     --------->MYB52(1)   tgcgttttgtaaactttatctttttcctcgggattcaacaacgtgcatgaattgttgttgttgtctcgggggaatcaaatcagccaatggatgtgttttt  8175600                                                               <-----------RAV1(2)                                                       <---------HSFB2a(1)                                                       --------->HSFB2a(1)                                                       <---------HSFC1(2)                                                       --------->At4g35610                                                  <---------HSFB2a(2)                                                  --------->HSFB2a(2)                                         <---------ARR14(2) ------>NtERF2                                         --------->ARR14(2)<---------ETT(1)                                      --------->ANAC55(2)  ----------->HVH21           --------->HSFB2a(2)        --------->ANAC46 --------->ZAT2           <---------HSFB2a(2)        --------->ANAC58 --------->HSFC1(2)          <---------LBD16             --------->ANAC55(1)  --------->DEAR3(1)  --------->ANAC58                    --------->ANAC58 <---------At4g35610              <---------ZAT6  --------->ANAC58             <------ZmHOX2a(1) <---------LBD16          --------->ANAC55(2) ------->ZAT18  --------->At4g35610  <---------LBD16   <---------ZAT2     <---------ANAC55(2)     --- --------ZAT18  <---------At4g35610 --------->MYB52(1)----------->ARR10   <---------ANAC46   <-------   gggcacgacttgtctggaagcagagtaccaagaggaacacacggatttagctcgggaagctccgaccaggtatgagacgtatgagaagtagggttatgct  8175700                                                         <---------YAB1                                                     <-------GAMYB                                                    <---------MYB46(3)                --------->AHL20(2)                                             <---------ARR14(2)                     <----------DOF2                                         --------->YAB1<-----------GT1      <---------ZAT6      <----    <---------AtLEC2             --------->TOE2(3)  --------->MYB111(1)    <---------TOE1(3)    <---- ------>KAN4(2)               <---------GLK1(1)    <--------P  <------MYB83<---------TOE2(3)   <<<<<< --YAB1     <------------CBF  --------->GLK1(1)   <-------GAMYB<------MYB46(1)--------->ARR14(2)<----   tattctccatggcaaattggagagaacaagggaaatctcaaaatgagaatagggttgttacgatttggtgaagaattagggttacgcttttaatatagtc  8175800                --------------->AGL15                <---------------AGL15                                                               -               <---------ANAC46                                                                     -               <-----------------AGL1                                                               -    ----------->GT1                                            <---------ZAT18                      - -----WRKY12   <-----------------AG                <---------TOE2(3)                               -- -----WRKY38(1)<---------ANAC58        <------------CBF        --------->ZAT18                     -- <<<WRKY6      <-----------------AGL2 --------->ATHB12<---------CCA1(2)------------>CBF  ------------ -----WRKY45   <---------ANAC58      --------->ARR11(3)<-----------ARR10  <------------CBF       <<<<   aacgagaagaaaaatttgcttgttttgggattttaagaagttattgggccattaacatatctaagcccacttaaacaattgtttttggtgacttagctag  8175900                                                                                <---------TOE2(3)                                                                               --------->MYB52(1)                                                                           ------>MYB46(1)                                                                           ------>MYB83                                                                         --------->AtMYB61                                                                         ------->GAMYB -------->TOE2(2)                                                        <---------MYB59 -------->DEAR3(1)                           <------ZmHOX2a(1)          --------->MYB46(3) -------->TOE1(2)                           <----------ID1       <-----------HVH21 ---------->HVH21                          --------->ANAC58     <-----------RAV1(1) ------->DEAR3(2)                    ------------------------>ANAC81   --------->ANAC58 ------->MYB46(3)                   ---------->DOF2           <---------At4g35610     <-----------TBP --------->WRI1         --------->WOX13(1) --------->ANAC58   --------->At4g35610   ----------->GT1 <<<ZML2>>>>>>>>>TBF1 ------------>CBF<----------ID1  ---------->DOF2  --------->ANAC58           ---   aaccgacgaagaagaagatgaagtagcaattagagagaaaaagacaaggacaagaagaaagttgtgctgtcgcaaccaaactaagggtgtatatatgtgt  8176000                                                        --------->ARR14(2)                                     ------->TEIL       <---------ARR14(2)        ----------->GT1     <---------ANAC58            --------->GLK1(2)    --------->MYB111(1)     <---------ANAC58      ---------->DOF2  --------->YAB1   <--------P             <---------YAB1      <---------ANAC46    <---------YAB1 ----------->GT1     <---------TOE1(3)      <---------ANAC46--------->LBD16 ------>ALFIN1       <---------TOE2(3) --------->YAB1  <---------GLK1(1)   gtgtggtaagtagaaaaactactaaggtatgcttgtatgtatcatgttgtgtaaaaggaatccgagttatcatgttccaaacgtttttgtgtttcatcaa  8176100                                                   --------->KAN4(2)                                                  <---------KAN4(1)                                                  --------->KAN4(1)                                                 <---------YAB1                                                <---------GLK1(2)                   <---------MYB52(1)                                     --------->ANAC58                              --------->LBD16                       <---------ANAC46     ---------->DOF2 <---------ATHB51      --------->HSFB2a(2)                       ----------->GT1     --------->AHL20(2)        --------->AHL20(2)                      --------->MYB59--------->ANAC58       --------->ICU4       <---------LBD16           --------->MYB52(1)     --------->ARR14(2)        <---------AHL20(2)<---------ANAC58        --------->ANAC46          <---------ARR14(2)        --------->AHL20(2)<---------ANAC58    <--   acaagtagacacaaaacagagagtgaggtatataagaattcgcaataaaagattattctgaaataattcaaaaaaatgttccttccggtatatcaaatcc  8176200  Previous    Next  AGI:  At4g14165.1    Description:  F-box family protein-related. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G22170.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 8174593    to: 8175710    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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