Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ==========================================                                                           <---------------AGL15                                                           --------------->AGL15                                                           <---------MYB59                                                          <-----------------AGL2                                                          ===========================================                                                          <-----------------AG                                                          ----------------->AG >>>>>>>>>>MYB80                                                          ===========================================                                                          ===========================================                                                          ----------------->AGL2                                                          ----------------->AGL3                                                          <-----------------AGL3                                                          ===========================================                                                     --------->ANAC46    <---------ZAT18                                      --------->AtMYB61   ----------------->AGL1                                   <---------ALFIN1  --------->ANAC55(2) <-------TEIL<---------------AGL15                                   --------->ANAC46  --------->ANAC58--------------->AtSPL8         -                                   --------->REM1(1) --------->ANAC55(1) --------->ZAT18            -                         --------->ANAC46--------------->AGL15      ---------->DOF2  --------------->AGL15                         --------->ANAC58===================================MADS_MADS================                    --------->REM1(1)--------->ANAC46<---------ANAC55(2) --------->ZAT14            -           --------->TOE2(3)  --------->ZAT6         --------->ANAC58<---------------AtSPL8       <--           --------->AtMYB61<-----------GT1    --------->YAB1------>MYB83<---------ZAT14   --------->YAB1  <---------HSFB2a(2)    --------->ANAC58==================================MADS_MADS ================  --------->HSFB2a(2)    --------->bZIP60(2)------>ZmHOX2a(1)------>MYB46(1)  --------->ANAC46    ---   tgttctaaaacaacctaagccttcaccaagtcactctacacctctcctattagaaacgtaaccaaatttagaaagtacacaaaccatctccaattagaaa  8164600   <---------------AGL15   --------------->AGL15  ----------------->AGL2  <-----------------AGL2  ----------------->AG  <-----------------AGL3  ----------------->AGL3  --------->MYB46(3) ==================MADS_MADS ===================MADS_MADS ==================MADS_MADS                     --------->CCA1(2) ===================MADS_MADS                   --------->ARR11(3) ==================MADS_MADS                    <---------ARR11(3)                             ------ -------->MYB52(1)                              --------->ARR11(1)                             ------ ----->MYB83                       <---------ANAC58                   --------->YAB1         <------- ===================MADS_MADS      <---------ANAC46               --------->AHL20(2)         -------- ----->MYB46(1)                    <---------ANAC58             --------->ANAC55(2)         --------- -------MYB59         --------->GLK1(2)     ---------->DOF2     <---------ANAC55(2)         <-------- ==================MADS_MADS     <---------------------WRI1<---------ICU4               --------->YAB1 ------>AtMYB61   --------->ANAC46 ----------->GT1 <---------YAB1 <---------AHL20(2)----------->GT1   cctaaccaattctagcaactacacaatctttcaattggggtgaattcaaagatatgattcaacattacttaattagaaattttgtctcgataatacctaa  8164700                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                <---------ZAT14                 <----                                                                --------->ZAT14                 <----                            <---------O2                        <---------ZAT18                <-----                            --------->TGA1a                    --------->ANAC46                ------                            --------->O2                      <---------LBD16                  <-----                            ----------->RAV1(2)             --------->ARR14(2)                <------      ================================bZIP_DOF      <-----------HVH21                         <------      ---------->DOF2       <---------TGA1a         --------->LBD16                           <------ >MYB46(1)                  --------->At4g35610    <---------ANAC58                           <------ >MYB83              --------->TOE1(3)             <---------ANAC58                          -------- --MYB59--------->DAG2 ----------->HVH21        --------->GLK1(2)                            <------- ->TOE2(3)----------->GT1   <---------At4g35610--------->ARR14(2)           <---------ANAC46 <------- >ANAC55(2)          --------->TOE2(3)         <---------GLK1(2)--------->LBD16       <------ZmHOX2a(1) -ANAC55(2)       <-----------GT1              <---------ARR14(2)        <-----------GT1     <-------   tttctgagaaaagggtgaaattaccttgacacctgagtctgaaaacccagattccgtcgcagtctccgcactaagtttccgtttaagaggattagacggc  8164800       <------NtERF2      --------->LBD16     --------->ALFIN1     <----------CDC5    <---------LBD16  --------->SPL7 <------NtERF2 --------->ATERF1(1) ------>NtERF2 ---------SPL7 ---------->HVH21 --------ANAC46 ------>At4g35610 ------>ATERF1(1) -------At4g35610 ----NtERF2 ------RAP2.3(1) ------ORA47(2) ------ATERF1(1) -->NtERF2<------NtERF2 ------RAP2.6(1) ------RRTF1(1) ------ERF1 ------DEAR4(2) -----ATERF1(2) -----DREB2C(2) -----DEAR3(1) -----RRTF1(3)                                                                               ------>ZmHOX2a(2) -----RRTF1(2)                                                                              <------ZmHOX2a(2) -----RAP2.3(3)                                                                            <---------ARR11(1) ---->DEAR3(1)                                                                             <---------ARR14(2) -----RAP2.6(2)                                        --------->ALFIN1                    <--------- -----RAP2.3(2)                                      --------->O2--------->HSFB2a(2)       <---------AGP1 ----ABI4(1)                                         <---------O2<---------HSFB2a(2)       --------->ARR11(3) --->ATERF1(1)                                       <---------ANAC46                      <---------ARR11(3) -NtERF2 --------->ANAC58                         <---------DEAR3(1)                       --------->ARR14(2) ---DEAR4(2)                                      ----------->HVH21                       <------NtERF2 ---RAP2.3(1)    --------->ARR14(2)               --------->DEAR3(1)                      <---------CCA1(2) ---ATERF1(1)    <---------GLK1(2)               <------NtERF2--------->ARR14(2)          <---------ARR14(1) ---ORA47(2)     <---------ARR14(2)              --------->ATERF1(1)                    <---------ANAC58 ->ANAC46--------->ANAC58   <---------YAB1      <---------ATERF1(1)    --------->ALFIN1 <---------ANAC58 --RAP2.3(2) <---------At4g35610               <---------ANAC46<------ZmHOX2a(2)        <---------ANAC46 --DEAR3(1)<---------WRKY38(1)             <-----------RAV1(2)--------->AGP1           <---------LBD16 --RAP2.3(3)--------->MYB52(1)           <-----------HVH21    <---------ARR14(2)   <----------DOF2   ggcggacgcggaggcaacggattcttcattctcatcgacctatggtcaggcgtcgacgtgttccgatctagaggtggagcattttctttggcggatctta  8164900                                                           --------->ANAC55(2)                                                           <---------ANAC46                                                           <---------ANAC55(2)                                                           <---------ANAC58                                                        <------NtERF2                                                        <---------MYB52(1)                                                        --------->ATERF1(1)                                                       <-----------HVH21                                                       ------>NtERF2                                                       <---------ATERF1(1)                                                      <---------O2                                                      --------->DEAR3(1)                                                      --------->RAP2.3(2)                                                    --------->LBD16               --------->ANAC55(2)         <---------HSFC1(2)                         ------>NtERF2                 ----------->GT1         --------->HSFB2a(1)                        <---------ATERF1(1)           <---------ANAC55(2)         --------->ATERF1(1)         <---------ANAC58 --------->O2                <---------ANAC46         <---------HSFB2a(1)         <---------ANAC46--------->RAP2.3(1)  <---------ANAC58     --------->REM1(2)               <---------ANAC58--------->ATERF1(1)  <---------ANAC58    --------->ALFIN1            --------->ALFIN1   --------->ANAC46     <---------ARR14(2)  <---------AtLEC2      --------->CCA1(2)          --------->DEAR3(1)   --------->ARR14(2)  <---------ANAC58     <---------ARR11(3)  --------->ALFIN1<---------ANAC58     <---------DOF5.7(2)  <---------ANAC46  --------->HSFB2a(2)  <-----------RAV1(1)         <---------ANAC58 --------->DAG2  <---------ANAC58  <---------HSFB2a(2)  --------->ALFIN1<---------ANAC46 <---------ANAC46         <- --ARR10 --------->HSFC1(2)  <---------TOE2(3) <---------GLK1(1)     <---------ANAC58---------->DOF2   atttgcgtggaggcttcgatttcgagatactagggtttggcgagtgtggctctccgccgtcgcgtaagatagcgtttcttggtaacgtaaagtgcttctt  8165000                ------------>CBF               --------------->AGL15               <---------------AGL15              <-----------------AGL3           --------->GLK1(1)                                <---------ARR14(2)       --------->LBD16                                      --------->ARR14(2)       --------->At5g28300                                  <-----------ARR10      <---------ANAC46                                      <---------ARR11(1)    ------>NtERF2                                           --------->GLK1(2)    --------->LBD16                                         ------->TEIL   --------->DEAR3(1)                             ----------->GT1   --------->ANAC46                      ------------------------>ANAC81 --------->ANAC46       <----  <---------LBD16             ---------->DOF2   ---------->DOF2     <----------DOF2        --------->TOE2(3) --------At4g35610   --------->YAB1     ---------->DOF2    <---------ARR14(1)   <-----------HVH21   catctccgccgtgaaatctacaattagaaacccaaagtagaagaaagagggaaagtaaatcgaatctgcgcttctacgagagcgtcagtgaaaccctagt  8165100                                                                                                  <--                                                                                                  ---                                                                                                <----                                                                                              <------                                                                                              -------                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                       --------->AGP1                                                                                       --------->ARR14(3)                                                                                       <---------AGP1                                                                                       <---------ARR14(3)                                                                                       <---------ARR11(3)                                                                                       <---------ARR14(2)                                                      ---------->DOF2                  --------->ARR14(2)                    ------------------------>ANAC81 --------->DOF5.7(2)                --------->ARR11(3)                <------ZmHOX2a(1)                   <---------MYB52(1)                <---------At4g35610     ---------->DOF2>>>>>>>>>TBF1                  <---------RAP2.6(3)                <---------CCA1(2) -----ZAT6---------->DOF2                         ----------->GT1--------->GLK1(2)<-----------HVH21   gtttgggcaaagaaaagaggaagaagaacgagagaagagaagagagagagagccgttaaagagcgagaattttgaatttgtttttgtcagatcttgtgaa  8165200                                           ---------->DOF2                                        --------->AHL20(2)                                        <---------AHL20(2)                                      <---------------AGL15                                   --------->AHL20(2)      <---------ARR14(2)        --------->AHL20(1)                     <---------DAG2      --------->ARR14(2)       --------->AHL20(2)                      <----------DOF2       --------   <---------TOE2(3)           <---------AHL20(2)                ------>ZmHOX2a(2)       ------->TEIL -------ZAT6                  --------->AHL20(2)             ----------->HVH21      <------ZmHOX2a(1) ------>ALFIN1                <---------AHL20(1)           --------->ANAC55(2)    --------->SPL7----- -----ANAC46         ------->TEIL  <---------AHL20(1)   <---------AHL20(2)        <---------TOE2(2) ---ZAT14       <---------ANAC55(2)<---------AHL20(2)  --------->AHL20(2)       <---------SPL7  ===== -->ZAT14   <-----------HVH21 <---------AHL20(2)     ------->TEIL==========================HOX2a_HOX2a   gtgttgacgattcgcatcacatgaatttctaaattattttatttaaaaagaaatgaattttatgtgatcgtgactttatggccgtaggatgaatccaacg  8165300                                --------->ALFIN1                               ------->MYC3                               <-------MYC2                               <-------MYC3                               ------->MYC4                               ------->PIF5                               ------->MYC2                               <-------MYC4                              --------->TGA1a                              <---------O2                              <---------TGA1a                          ----------->GT1                              --------->O2                            --------->ALFIN1                            <------------OsbHLH66                     <---------AtMYB61                         --------->PCF2                             --------->ALFIN1                       --------->DAG2         <---------ANAC58    <---------ANAC58                     ---------->DOF2    <---------AHL20(2)        <---------O2                ---------->DOF2<-------PIF5   <---------ANAC46    <---------TGA1a                 <--   <---------KAN4(2) ===================bZIP_DOF                  --------->TGA1a      <---------ALFIN1 ->MYB52(1)     ========================bZIP_DOF                  --------->O2        <---------SPL7 -->GAMYB----------->RAV1(1)<---------ALFIN1  <---------ANAC58    <---------ANAC46    ------>NtERF2 =======================================MYC_MYB <---------ANAC46  <---------ANAC58<-----------RAV1(1)   gagggaatgagcaacaaaaaaagaaaaggcccacgtgtgtgtttaatggtgtgtgttttagtctttagacgtgtggtagtaatactgccgcacgggtttt  8165400            --------->ANAC58            --------->ANAC58            ----------->GT1           --------->LBD16          <---------ANAC46        --------->DEAR3(1)       --------->ANAC46      <---------At5g28300     <---------ALFIN1                                                                              <-    --------->MYB46(3)                                                                           ----   <------ZmHOX2a(2)                                                                             <---   --------->CCA1(2)                                                                            <----  --------->AGP1                             --------->ALFIN1                       --------->ANAC58  --------->ARR14(2)                        --------->ARR14(2)       <---------MYB52(1)       -------  <---------ARR14(2)                        <---------ARR14(2)      <-----------HVH21 <---------ANAC46  --------->ARR11(3)                    <---------At4g35610        --------->ANAC46 --------->ANAC58  <---------ARR11(3)           --------->ANAC46                <-----------GT1    <---------ANAC58 <- ---------GT1            <---------ATHB12<---------ANAC46     ----------->HVH21   <---------ANAC58 <-   ttaagatccaccgcgcgtaaaaatccaatccatccgctatggagcgggtatgggtttaaaacttttgacccgttacgaagcatggctcgcgagtaatcgt  8165500  Previous    Next  AGI:  At4g14150.1    Description:  PAKRP1 (PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 1); microtubule motor/ plus-end-directed microtubule motor. similar to KINESIN-12B/PAKRP1L, microtubule motor/ plus-end-directed microtubule motor [Arabidopsis thaliana] (TAIR:AT3G23670.1); similar to KINESIN-12B/PAKRP1L, microtubule motor [Arabidopsis thaliana] (TAIR:AT3G23670.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN75214.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43515.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752); contains InterPro domain Kinesin-related (InterPro:IPR010544) Range:  from: 8158567    to: 8165003    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version