Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <----------DOF2                 --------->ZAT2                                                    <---------DAG2                 --------->At4g35610            --------->ANAC58                 ------>MYB83                 <---------At4g35610            --------->ANAC58                 ------>MYB46(1)          <----------DOF2                     ---------->DOF2           <---------TOE2(3)         --- ---------HSFB2a(2)      --------->YAB1     --------->ANAC58            <---------TOE1(3)   --------- -------->HSFB2a(2)    --------->AHL20(2)   --------->ANAC58 <-------TEIL      <---------MYB59   ---- -GT1  ------->TEIL----------->GT1  --------->YAB1    <----------DOF2   --------->MYB59   <----------   ttctcgatgaatctttatgagctgaaaaaataatccaaacataaacaagaaagcatctttagtttcatagaatttaggttaccaacttttttatactaaa  8156400                                                                                              -------                                                                                           --------->ANAC58         --------->ANAC58           --------->ANAC46                                       --------->ANAC55(2)    --------->YAB1                  --------->ANAC58                      <----------ID1   --------->ANAC58 ------>TOE2(3)     <------ZmHOX2a(1)                             --------->CCA1(2)        <---------ANAC55(2) >ANAC46 --------->ANAC58           --------->ANAC58           <---------TOE2(3)        <---------ATHB12 ----->ANAC46  <----------DOF2 <---------ETT(2)                <---------YAB1         --------->WOX13(1) -GT1  ---------->DOF2<------ZmHOX2a(2)                        <---------TOE1(3)   --------->YAB1----   cgtcaataagaaagcaactttaggatcaaaatgtctacaagaaaacaaaacactctcaaatgtttaagataagaagagaacaaaataacaatcaagtaac  8156500        --------->LBD16                                    --------->ATHB12       --------->LBD16                                    --------->ICU4      <---------LBD16                                     <---------YAB1     ------>ZmHOX2a(2)                               --------->YAB1    <------ZmHOX2a(2)                               <------ZmHOX2a(2)                     --------->ARR14(2)   <---------ARR11(3)                              --------->ARR11(3)                --------->ANAC58   --------->ARR14(2)                              <---------ARR11(3)   ------>MYB46(1)   <---------ARR14(2)   <---------ARR14(2)                       --------->REM1(1)           ------>MYB83 --------->ANAC46   --------->ARR14(3)                       --------->MYB46(3)         <---------ALFIN1  --------->WOX13(1)   --------->ARR11(3)                     ----------->RAV1(1)       --------->PCF2   --------->ANAC58   <---------ARR14(3)                  --------->ANAC46 <---------ICU4 --------------->AGL15 -->MYB52(1)                           --------->ANAC58<---------YAB1  <---------------AGL15 --->GAMYB          --------->GLK1(2)  --------->ANAC58--------->ICU4 ----------------->AGL3      ---   agcaagatcccggagactagagtttctatgtaatcaactcgaagcaacaacaagatcatgattattgagagacccacttagagaaataagccaatctact  8156600                                                            --------->YAB1                                                           <---------ATHB12                                              =============HOX2a_HOX2a                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                             ==============HOX2a_HOX2a                             ----------->GT1<---------ARR11(3)         ---------->DOF2             <---------HSFB2a(2)            --------->ARR11(3)      <---------ATHB12          <----------DOF2 ---------->DOF2 --------->MYB59--------->WOX13(1) ------->DOF2--------->HSFB2a(2) --------->GLK1(1)  <------ZmHOX2a(1)--------->YAB1 --------->TOE2(3)   gaaagtctgaaacttttggaaaatgtgagaaagggaaatcaaattagatccctaggaatcaatcagacaaatcaaaagccctaaaaccttggtcgtgaac  8156700                                                   --------->ARR11(3)                                                <------ZmHOX2a(1)         <------------CBF                                                ==========================HOX2a_HOX2a                                                ===========================HOX2a_HOX2a                                         ==============HOX2a_HOX2a   ----------->GT1                                         <------ZmHOX2a(2)          ------>ZmHOX2a(2)                                   ================================HOX2a_HOX2a                                   ==============HOX2a_HOX2a       <------ZmHOX2a(2)                                   =============HOX2a_HOX2a      ------->GAMYB                            <-----------HVH21   ===================HOX2a_HOX2a                           ==============================================MYC_MYB                 ----                 <---------ANAC46  <------ZmHOX2a(1)  *TSS      --------->MYB46(3)           <-------        --------->TOE1(2)  <---------O2 <---------ARR11(3)  <------ZmHOX2a(2)                <-------     <---------CCA1(2)     --------->TGA1a------>ZmHOX2a(2)--------->ARR11(3)             <----------   <---------ANAC58        <---------TGA1a=============HOX2a_HOX2a--------->MYB52(1)  <------ZmHOX2a(2)   <---------ANAC58        --------->O2 --------->ARR11(3) <---------ARR11(3)    --------->YAB1<-----   aaattgcataccttggacgacttggagactcgtgagaggagagatcgtaaggagatttagagatcaacgatcggaaaattgaatcacgatcaaattgacc  8156800                                                      <---------------AtSPL8                                                     ------>ZmHOX2a(2)                                                   --------->ARR14(2)                                                   --------->GLK1(2)                                                   <---------ARR14(2)                                                   <---------AGP1                                                   <---------ARR11(3)                                                   --------->ARR11(3)                                                  <---------CCA1(2)                   ----------->RAV1(1)                                              --------->MYB52(1)                  <---------WRKY18(1)                              <---------MYB59------>NtERF2<-------TEIL           --------->WRKY38(1)                             --------->MYB46(3)   <---------ARR14(1)             --------->WRKY12                           ------>MYB46(1)  ----------->HVH21                   <---------WOX13(1)  ----------->GT1<-----------HVH21  --------->ANAC46<------ZmHOX2a(2)         --------->ATHB12 ----->LBD16    <---------ANAC58------>MYB46(1)----------------->AGL1        <---------YAB1         - ----GT1 --------->ANAC58  ------>MYB83<---------ALFIN1----------->GT1       <-------TEIL       ----- --WRKY18(1)    <----------ID1--------->AtMYB61<-----------------AGL1     <---------HSFB2a(1)   ----- --CBF   --------->ANAC58<---------MYB59    <---------ETT(1)              --------->KAN4(1)     ----- ----LBD16      <---------ANAC58------>MYB83--------->DEAR3(1)           <---------KAN4(2)   --------   ggataagtgaaacgaaatgcgtcaaaaccgaaccaaaccagacactccgaccggatctggtacattctaaaatggaatgttcattgacccacaaatacca  8156900         --------->LBD16       <---------LBD16       <---------At4g35610   --------->GLK1(2)  <---------ARR14(2)  --------->ARR14(2)  --------->ARR11(3)          <--------P  <---------ARR11(3)       --------->LBD16  <---------GLK1(2)      <---------LBD16 ---------->ARR10       ------->TEIL                                   <---------ANAC58 ---->ANAC58          <---------ZAT14                                  <---------ANAC58 ---->ANAC46          --------->ZAT14                         ---------->DOF2                     <-- ---->ANAC58         ----------->HVH21                  --------->REM1(1)     <----------DOF2    <<<< ->MYB52(1)        --------->LBD16        --------------------->WRI1  --------->MYB52(2)      <------   gcaagattctgcggattgaaccggtgaaccgggttgctctacttctaagttctaatctacaactacaagcggtacttgcgctttaacacatctgtttatg  8157000                                                   <---------ARR14(2)                           <----                                            --------->KAN4(2)                            ============                                           --------->HSFB2a(1)                           ============                                           --------->KAN4(1)                             <---------REM1(1)                                           <---------HSFC1(2)                      <---------ANAC46                                           --------->HSFC1(2)                      <---------ANAC58                                           <---------HSFB2a(1)                     <---------ANAC58                                           <---------KAN4(1)                     <<<<<<<<<<AtWER-----                                          <---------KAN4(2)                    <---------ANAC58 <----                                      --------->HSFB2a(2)                 <---------ICU4 <-----------RAV1(1)      ----------------->AGL3      <---------ANAC46 ------->TEIL           <---------ARR14(2)    -----      ==========================================MADS_MADS     ----------->GT1  <---------ANAC58 ----- ---------GT1                   <----------DOF2    --------->ARR14(2)    <---------YAB1 --------->ARR11(3) <<<<<MYB98      ---------->DOF2--------------->AGL15  --------->At4g35610--------->ARR14(2)  <------ ---TOE2(3)--------->YAB1     <---------At4g35610 <---------CCA1(2)    --------->YAB1 ----------->ARR10   ttactgtattcatttatagcaaagactggctctgcttcttgtagaatgttctgtatccgatgagtagtatatatcatatttgcatgcgtagatgttgcag  8157100        <---------DOF5.7(2)        --------->MYB52(1)        ---------->DOF2      --------->DOF5.7(2)    <---------ZAT6 -----At4g35610 =======RAV =====RAV ---->At4g35610                     --------->ANAC58  <---------DAG2 -----ZAT2                          --------->ANAC58  <----------DOF2 ---->ZAT2--------->ANAC46    --------->At4g35610 --------->ZAT14                   <---------YAB1 ------>RAV1(2)       <---------ANAC58            <---------ZAT14                <---------YAB1 -----RAV1(2)         <---------ANAC58          --------------->AtSPL8          <---------ARR11(3)   ctgggagagttaacgcagtcgatttcttgctcagaggcaagacttccttcagagtacttttctcttggcaagagcattccaagattataagagactcaaa  8157200                                                                                              -------                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)                                                                              <---------ARR14(2)                                                                     <---------TOE2(3)  <--------P                                                                 --------->ANAC55(2)   <-------GAMYB                                                                 <---------ANAC55(2)   <---------ANAC58                                      --------->ANAC55(2)       <-------TEIL  --------->ARR14(2)                         ------>ZmHOX2a(1)                  --------------->AtSPL3     <---------ANAC58                        --------->TOE2(3)     ------->TEIL  <---------------AtSPL8<----------DOF2   ctcaattccaattgaactcgttgagtccttaactacattcaagtgatgaatttgttcaagatgaggtacttaatgttgaagatactttgggttgctatgt  8157300  Previous    Next  AGI:  At4g14147.1    Description:  ARPC4 (actin-related protein C4). similar to putative ARP2/3 complex 20 kDa subunit, 3'-partial [Oryza sativa (japonica cultivar-group)] (GB:AAO73272.1); similar to Os03g0848300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001051892.1); contains InterPro domain ARP23 complex 20 kDa subunit; (InterPro:IPR008384) Range:  from: 8153872    to: 8156754    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version