Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <------NtERF2                              --------->RAP2.6(2)                              ------>NtERF2                             --------->ATERF1(1)                             <---------RAP2.6(2)                             --------->DEAR3(1)                            <------NtERF2                        ----------->HVH21                            ------>NtERF2                    <------NtERF2                            <---------ATERF1(1)             ------>NtERF2                            --------->ATERF1(1)           --------->ATERF1(1)                            <---------At4g35610           <---------ABI4(2)                            --------->At4g35610           <------NtERF2                         -----                            <---------DREB2C(1)           --------->ZAT18                       <----                           <---------RAP2.3(1)           ------>NtERF2                          <----                           <---------ATERF1(1)           <---------ATERF1(1)               <---------ZAT18                  <-------GAMYB------>NtERF2             <---------RAP2.3(1)               --------->ZAT18                 <---------DEAR3(1)  --------->HSFB2a(2)--------->ANAC46            <---------HSFB2a(2)                 <---------ANAC46<----------DOF2        --------->ANAC58--------->ZAT14   --------->ALFIN1                <------NtERF2<---------DEAR3(1)         --------->ANAC58<---------ZAT14 --------->ALFIN1              <---------DEAR3(1) <---------DAG2         --------->bZIP60(1)         --------->HSFB2a(2)           ----------->HVH21--------->DEAR4(2)          <---------DEAR3(1)         <---------LBD16     --------->GLK1(1)    <---------RAP2.3(2)           <---------bZIP60(1)       <---------LBD16     <---------GLK1(1)    <---------RAP2.6(2)          --------->RAP2.6(3)        ------>ZmHOX2a(1)    <---------ARR11(3)    <---------DEAR3(1)          <---------ATERF1(1)         ===================    --------->ARR11(3)   <---------LBD16             ----------->HVH21  <---------ZAT18 <---------ANAC46   attgaagatttctgagacggcgttgttcgcggcggccttatggaataacatttggacgacggcaccggtaacagtgtagttgtcctcggggagtgggcat  8129100                            <------ZmHOX2a(1)                        --------->TOE1(2)                      <------ZmHOX2a(2)                      <---------YAB1                       <---------DOF5.7(2)                      =================================HOX2a_HOX2a                      =============HOX2a_HOX2a           --------->DOF5.7(2)                     --------->ARR11(3)                 --------->TOE1(3)                     <---------ARR11(3)                 <----------DOF2                    --------->GLK1(1)                   --------->TOE2(3)            =======================HOX2a_HOX2a        ------>MYB46(1)           ---------->DOF2            <------ZmHOX2a(2)                         ------>MYB83  <------ZmHOX2a(1)               -           --------->ARR11(3)                      --------->DEAR3(2)      <-------GAMYB        <---- ---->At4g35610<---------YAB1                      --------->MYB46(3)     <---------MYB46(3)   <----- -----At4g35610--------->At4g35610               <---------ARR14(2) ================================= --NtERF2  <---------ARR11(3)                   <------ZmHOX2a(1)<---------HSFB2a(2)           ------ ==================HOX2a_HOX2a         --------------->AGL15     --------->HSFB2a(2) <-------TEIL   <   cggagagagaagagatcatcagagatcataggagcgaatagccacaaggaggaaccaactttaacgtctaggacgactgttgtaaagtccatacctagat  8129200                       <------NtERF2           --------->SPL7          ------>NtERF2--------->ATERF1(1)         ----------->HVH21         --------->ZAT18        <---------ANAC46       <---------At4g35610                                --------->GLK1(1)       --------->At4g35610                           --------->ZAT18      --------->MYB52(1)<---------DEAR3(1)          ------>NtERF2<-------MYC3   <---------AtLEC2   <---------SPL7               --------->LBD16  <-------TEIL       <---------ANAC46              <---------ATERF1(2) ------>MYC3      <---------DEAR3(1)              <---------ANAC58 --ZmHOX2a(2)  <---------GLK1(2)                  <---------ANAC58  <---------ANAC58 ----ARR11(3) --------->At4g35610                 <---------ANAC46  <---------ANAC58 ==HOX2a_HOX2a--------->ZAT2                     <---------LBD16 ------->MYC2 --->ARR11(3) <---------At4g35610             <---------ANAC58   ------->MYC3 -------MYC3  <---------ZAT2                  <---------ANAC58   <-------MYC2                  <-----   catgtgcatagcggacagcttcggcgtaggcggtctgagaccattcggtcttgcgggcacaaatccatgtgcttgcgaaggctgattcgagagtagggta  8129300                                                                   <---------ANAC58                                                     --------->MYB111(2)                                                     --------->MYB46(2)                                                     --------->MYB55(2)                                                     --------->MYB52(2)                                         <---------ZAT2            <---------ANAC58                                         <---------At4g35610       <---------ANAC46                                         --------->At4g35610--------->RAP2.6(2)                                         --------->ZAT2   --------->At4g35610                  ------                                    ------>NtERF2    --------->MYB111(1)                      -------                                --------->ANAC58     <---------MYB46(3)                       <------                                --------->ANAC46    <---------MYB55(1)                        <------   --------->ATHB12             --------->ANAC58   <---------MYB52(1)<---------ZAT6   <------ZmHOX2a(1)  <---------ATHB12   --------->At4g35610------>MYB83<--------P  XXXXXXXXXXXXXXXXXXXX>MIR397A--------- ---P                <---------At4g35610------>MYB46(1)   <---------At4g35610        ----------->HVH21   gcaaatcattcgtttagagagactgcttacttctacgacacctagctgagagcggtagttagccgcattgagtgtaacattgactccaggacgggagata  8129400                                                                             <---------ANAC58       -                                                                             <---------ANAC58       <       <----------DOF2                                               --------->MYB52(1)             < --->CCA1(2)                                                       <---------ATHB12                <- -->ARR11(3)                                                       <---------MYB55(2)              -- ---ARR14(2)                                                       --------->MYB46(3)   <---------ZAT6 ---ARR11(3)           --------->HSFB2a(1)                       --------->WOX13(1)   <---------ANAC46 -->ARR10      <---------ARR14(2)                            <-----------GT1 <---------ANAC46<-------   ttggctctgcttttgcagaaaccgagtcttccatcaagatggagcgcgagttcgtaactcttatttccaatcaccggttgagtgtctctcgtgttacgag  8129500        <---------WOX13(1)      --------->ATHB51      <---------ICU4      --------->ATHB12                                                   ------->GAMYB     --------->ICU4                                                      ----------->HVH21     <---------YAB1                  ----------->RAV1(2)                <---------MYB52(2)         --   --------->YAB1            *TSS  --------->ANAC58                    ----------->RAV1(2)        --- ------>ZmHOX2a(2)          <---------ARR14(2)                         <---------At4g35610       ---- -------->GLK1(1)           <---------ARR11(3)                         --------->At4g35610--------->LBD16 ---------GLK1(1)           --------->ARR11(3)                      <------ZmHOX2a(2)    <---------ANAC46 ------ZmHOX2a(2)           --------->ARR14(2)                 ---------->DOF2           <---------ANAC58 --------ARR11(3)      --------->ALFIN1              <---------ICU4 ==========================HOX2a_HOX2a ------->ARR11(3)      <---------ANAC46         ------>ZmHOX2a(2)  <---------ARR11(3)    <---------ANAC58 --ANAC46        --------->LBD16   --------->ANAC58 <---------YAB1 --------->ARR11(3)  ------>ZmHOX2a(1)   ggatctcataattggtttccgagaggtgtggatattcaagcctgactcgatctcataaatgctccaaaagatcaactgaccctctgttcctccgtgtctc  8129600                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                            ---------                                                                                           <---------YAB1                                                                                         --------->YAB1                                                   <---------YAB1                       <------------               <---------ZAT14          <---------AHL20(2)                             <---------ANAC55(2)               <---------ZAT18         <---------AHL20(2)                            --------->AHL20(2)               --------->ZAT14         --------->AHL20(2)     <----------DOF2     <---------ICU4   -- --------->HVH21                  --------->AHL20(2)  <---------YAB1     ----------->GT1------------- ------>LBD16--------->ZAT14      <---------AHL20(2)--------->YAB1       <---------ZAT6<---------ANAC46 ----->ANAC46<---------ZAT14<-----------GT1       <-----------GT1--------->YAB1 ------------>CBF <---   cgtgacatttgcctctgtacaccctcaaatttacatttaaatttttttgaattttcattatagtctttcatagtactgtaacaacaattacttataatga  8129700      <---------TOE1(3)     ---------->DOF2     <---------DOF5.7(2) -->HAHB4                                        ----------->GT1 --->YAB1            ----------->TBP             <---------YAB1 -->ICU4             --------->AHL20(2)        <---------ICU4 ---->GT1           --------->AHL20(1)         --------->YAB1 ---YAB1            <---------AHL20(1)      --------->YAB1                                          - >YAB1<---------TOE2(3)                  --------->YAB1                                             - ---AGL15          --------->AHL20(2)  --------->AHL20(2)                          ------------>CBF < -------->DOF2 --------->AHL20(2)      <---------AHL20(2)                      --------->ANAC55(2)  < -->AGL15   --------->YAB1           ----------->TBP     --------->AHL20(2)    <---------AtLEC2------ ------YAB1<-------TEIL----------->TBP--------->YAB1    <---------AHL20(2)   <-----------GT1   <-----   taaaagttaaagtttcataaaatatatataaaacatactataaaaataatcatgttaaataatatacaaaaacaaaaatttacatgacaatacaaaatta  8129800                        --------->AHL20(2)                                <---------AHL20(2)                    --------->AHL20(2)                                    --------->AHL20(2)    ------>ZmHOX2a(1)   <---------AHL20(2)                               --------->AHL20(2) -------->ARR11(3)  <---------AHL20(2)                           --------->AHL20(2)           <------ -------->ARR14(2)  --------->AHL20(1)           ----------->RAV1(1) --------->AHL20(2)       ------- -----------GT1     <---------AHL20(1)          --------->ANAC46 <---------AHL20(2)          -------- ---------ARR14(2) --------->AHL20(2)         --------->ANAC46  <---------AHL20(2)        --------->AHL20(2) --->AHL20(2)      <---------AHL20(2)     --------->AHL20(2)    --------->AHL20(2)----------->GT1 ----AHL20(2)  --------->AHL20(2)   ----------->GT1 --------->TOE2(3)<---------AHL20(2)   --------->YAB1   tatatcctcaccaaaaaaaaaataaattatatatgaattagaaaataaacacaacataaaacataaaaaaatttataaaattagatgtaaaattataaaa  8129900                                                <---------YAB1                                                <---------AHL20(2) ------------>CBF              <---------ARR14(2)  <---------YAB1 ---AHL20(2)                   --------->ARR14(2) <------------CBF     <---------AHL20(2)          -- -->AHL20(2)        --------->YAB1   ------------>CBF        <---------AHL20(2) <---------YAB1     <- ->AHL20(2) --------->MYB59   <---------CCA1(2)<---------AHL20(1)      --------->AHL20(2)<---------YAB1   ttattcaatgtagttatgtctataatgctcccatatatgctcaatgtaatattattgttgtataaatttgtttttaaatgttatgttttttatatttgaa  8130000  Previous    Next  AGI:  At4g14104.1    Description:  similar to unknown [Raphanus sativus cryptic virus 2] (GB:ABB04856.1) Range:  from: 8128703    to: 8129529    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g14105.1    Description:  unknown protein Range:  from: 8129471    to: 8129671    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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