Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <-------GAMYB       <---------ANAC58          --------->MYB55(2)   <---------ANAC46          <---------MYB46(3)   <---------bZIP60(2)       <------MYB46(1)         <---------ANAC58                                       <---------ANAC58       <------MYB83   --------->ARR14(2)                                              <---------ANAC58      --------->MYB111(1)   ----------->HVH21                                 <------NtERF2      <---------AtMYB61     ----------->TGA1                                 ------>NtERF2 ------NtERF2         <---------ARR14(2)                                     <-----------HVH21 -------->At5g28300   <---------MYB52(1)                           <---------LBD16  --------->ARR11(3) --------->GT1       <-------GAMYB                      <---------ZAT6   <---------DEAR3(1) -------DEAR3(1)    <---------MYB46(3)                <---------ANAC46 --------->ARR14(2) ------ABI4(1)     <---------DEAR3(1)    <------MYB46(1)--------->ALFIN1 ------>ZmHOX2a(2) ----->ZAT18     ------------>AtMYB77    <------MYB83<------ZmHOX2a(1) <---------ARR14(2)          -- ----RAP2.3(3)--------->MYB59<---------TGA2(2)       ===========================HOX2a_HOX2a  --------   gcggtgatttggtggttagggacggttatggtgacgtagagattggtttgagagaggagtgtgagactctctggatcggcgtcatagagcttgacatgac  8120000                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                           <---------ARR11(1)                                                                                        -------------                                                                                        <------------                                                                                       --------------                                                                                       --------------                                                                                       <-------------                                                       ------>ZmHOX2a(1)           <---------ANAC58                                                   <-----------GT1                 <---------ANAC58      <---------WOX13(1)                       <--------P                         <---------STY1(2)   <---------YAB1                            <------MYB83                         --------->STY1(2) --------------------->WRI1                  <---------MYB46(3)               <---------ATHB12 <----------DOF2                             <------MYB46(1)                 ------>MYB46(1) ------->ZAT2               <---------WOX13(1)<-------GAMYB                  ------>MYB83  --------->GLK1(2) --->HVH21              <---------WOX13(1)  <---------AtMYB61           <-----------GT1--------------   cagctttgatagatttgatgaagttgatggattgatatggagatgggaggttgtttcctcttcttccatagttgataccaatcttgctagccaaatctag  8120100                                               ----------->RAV1(1)                                          --------->LBD16                                         --------->ANAC55(2)                                         <---------ANAC55(2)                                         <---------HSFB2a(2)                                         <---------ANAC58                                         <---------ANAC58                                         --- -->AGL15                                <---------ANAC46                                      <----- ---AGL15              <---------ZAT18   --------->HSFB2a(2)                                   <----- --->AGL3         ----------->RAV1(2)   <---------LBD16            --------->ANAC58            <----- --->AGL2        ------->TEIL           <-----------------------TaNAC69(2)                     ------ ----AGL2   <---------AtLEC2         --------->ZAT2      ----------->GT1                       <----- --->AG ------>ZmHOX2a(1)            <---------ZAT2   ------->TEIL --------->ANAC58            <-----   cattgttttcctctgcatgtacctgtgcccttggaaccgagttgcggaacaacatgaacctgtaaaaccaagaaaaccatgttcaatatgggagattacg  8120200      ----------->GT1 ------->DOF2         --------->ATHB51                ----------->GT1 ----ANAC55(1)        <--------HAHB4      ---------->DOF2      <------ZmHOX2a(1) ----ANAC58 <---------ICU4  --------->At4g35610  --------->ANAC58 ----ANAC58 --------->YAB1  <---------At4g35610  --------->ANAC58    --------->ANAC58 --->ANAC55(2)        <---------ICU4 <---------ANAC58 <------MYB83 ---------->DOF2 ----ANAC55(2)       --------->ICU4  <---------ANAC58 <------MYB46(1)--------->ANAC58  <----------DOF2 ----ANAC46--------->ICU4  <---------TOE2(3)<----------ID1   ------------------------>ANAC81        <   taaagaaaatgtaaacatgatgcattattaagatgacttacttgaaaagacaaggatggtgaagaggaagaaagcaagaagagacatgtctttgtgtttg  8120300                                                                                                    <                               --------->YAB1                        <---------At4g35610            <                           <---------YAB1                      <------------CBF                   <--                  <-----------RAV1(1)                    <---------bZIP60(2)                    -----       <------MYB46(1)<------MYB83  ----------->GT1      --------->ALFIN1                       <----       <------MYB83   <------MYB46(1)                    <---------ANAC58                      <-----      <---------AtMYB61    --------->ICU4                <---------ANAC58                      <-----      --------->MYB59<---------AtMYB61                <---------AtMYB61   ----------->GT1    <------- ---------ANAC46  --------->ALFIN1<---------GLK1(2)  *TSS<---------ANAC46<---------TOE2(3) <---------ZAT14   tgtctggtttggtttgcaatgtgttggtgatgatcagaatgtgattttaagatggaatggtgtggcattggagatgaggtttataagtaagagtatggtg  8120400        --------->ATHB12    <------MYB83    <------MYB46(1)   <---------AtMYB61  <--------P ---------REM1(1) ---------ZAT6                <----------DOF2 -------ANAC46        --------->ANAC58              <----------DOF2 ---->ZAT14           --------->ANAC58           <-----------GT1 -----ZAT14       --------->AtLEC2          <---------YAB1                                     <----- ----ANAC46       --------->ANAC58       <----------DOF2                 <----------DOF2   ---------- ----REM1(1)      --------->ANAC58      <---------ANAC58         --------->YAB1     --------->YAB1 --ANAC46<------------CBF---------->DOF2<---------ANAC58        <---------YAB1     <---------YAB1 <--   tagtgtaggtttattgagtcatgcaagaaaagctttgttttggcttttgattttctttttgaaactctcatagttcttttgtgctatgattttaaaagga  8120500          <------MYB83          <---------MYB46(3)          <------MYB46(1)          ----------->GT1      <------MYB83      <---------MYB46(3)    <--------P   <---------ANAC46   <---------ANAC58   <-------GAMYB   <---------ANAC58  --------->ATHB12  <------MYB46(1)  <------MYB83  --------->MYB55(2)                   --------->LBD16  <---------MYB46(3)                   --------------->AGL15                                       <-  --------->MYB52(2)                   <---------------AGL15                                       -- <---------AtMYB61                <----------DOF2                                                 <-- -ZmHOX2a(1)              --------->ANAC46                                                        <-- >DOF2<------MYB46(1)     --------->ANAC58     --------->TOE2(3)     <---------YAB1               --- -------MYB46(3)          --------->ANAC58    ----------->GT1 <-------TEIL                   --------   ttgttggttggatggttcaaattgaaccaagaaacactttccccaatattgttaattttgcaaatacatttctgattgtagattgagagattatacatca  8120600           --------->ZAT18      <---------ZAT14 --------ICU4 ------->YAB1                                       <---------TOE2(3)     --------->ZAT14      <----- -------ATHB51                                    <---------AHL20(2)      <---------ZAT14     <------ -------ATHB12                           --------->YAB1         ---------->DOF2           <---------AHL20(2) ------>ICU4    --------->MYB52(1)      <---------YAB1        <---------AHL20(2)         --------->AHL20(2) ->TOE2(3) <---------ZAT18     ------->TEIL  ------------>CBF--------->AHL20(2)          <---------AHL20(2)   ataatgagtttagtagactaatggactaaaatgtatgtttcgatgataacaatttatgtagaatttaaaagaactgtatactatatagtattttaattta  8120700                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                              ------>NtERF2                                                                                              <------                                                                                              -------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------        --------->ANAC58                                                                   --------->MYB52(1)        --------->ANAC46                                                                  ------->GAMYB        --------->ANAC58                                                                  --------->DEAR3(1)     <---------ZAT18                                                   --------->DOF5.7(2)--------->ANAC46     --------->ZAT14                                                   <---------MYB52(1)<-----------     <---------ZAT14                                       <---------ATHB12              --------->MYB46(3)   --------->LBD16                                      <---------ALFIN1                 --------->DEAR3(2)  <---------ANAC58                           <----------DOF2         <---------ICU4     <---------At5g28300  <---------ANAC55(1)                   <-------MYC3    --------->AtMYB61         --------->AHL20(2)  <---------ANAC46          --------->ZAT14 <---------ANAC58         --------->YAB1    <-----------GT1  <---------ANAC58          <---------ZAT14 <---------ANAC58        --------->ICU4<---------AHL20(2) ------GT1 ------->TEIL    <---------ALFIN1 <---------ANAC46--------->YAB1     --------------------->WRI1 ---AHL20(2) *TSS        --------->SPL7 ------->MYC3   --------->MYB46(3)<---------ARR11(3)<---------ATERF1(1)   tcttccgtgcacgaaccaaaacttcagtaccacactgatacacatggcttttagacgaccactcatagtaatcgttatcttcatttatataaccgccggc  8120800                        <-------PIF5                        --------->ATERF1(1)                       <---------ATERF1(1)          --------->RAP2.3(1)          --------->ATERF1(1)         <---------RAP2.3(1)         <---------ATERF1(1)        --------->ANAC46------->PIF5        --------->DEAR3(1)      ------>NtERF2        <---------ATERF1(2)    --------->ANAC58        --------->ATERF1(2)    --------->bZIP60(1)        --------->RAP2.3(3)    --------->DEAR3(1)        --------->RAP2.3(2)    --------->ANAC58       --------->ERF1  <---------DEAR3(2)       --------->DEAR4(2)     --------->RAP2.3(1)      --------->ANAC46       --------->ORA47(2)     <------NtERF2            --------->ANAC58       --------->RAP2.3(1)    --------->ATERF1(1)      --------->ANAC58 -----ANAC58           --------->At4g35610            ------->MYC3 -----ANAC46  --------->LBD16 --------->SPL7          <-------MYC3 -----ANAC58 <------NtERF2  --------->DEAR3(1)        <-------MYC2 -NtERF2<---------DEAR3(1)  ----------->HVH21         <-------PIF5 ---ATERF1(1)<---------ANAC46<---------ATERF1(1)      ------->MYC2 -->LBD16--------->ABI4(1) <------NtERF2              ------->PIF5 ->DEAR3(1) <------NtERF2 ------>NtERF2   <---------ALFIN1 ->RAP2.3(2)<---------LBD16--------->RAP2.3(1)       --------->ANAC58 --DEAR3(1) <---------At4g35610--------->ANAC46      --------->ANAC46 ->ATERF1(2)--------->LBD16--------->DEAR3(2)        --------->ANAC58 --ATERF1(2)------>NtERF2 --------->ABI4(2)        <---------ALFIN1 -LBD16--------->ATERF1(1)<---------ATERF1(1)   <---------ARR14(2)                  ------>ZmHOX2a(2) >DEAR4(2)<------NtERF2<---------DEAR4(2) --------->ANAC58                         <------ZmHOX2a(2) >ATERF1(1)--------->DEAR3(1)------>NtERF2--------->ANAC46                    ------>NtERF2 >RAP2.3(1)<---------ANAC46--------->ATERF1(1)  --------->ARR14(2)            --------->LBD16 >ERF1<---------ATERF1(1)--------->ALFIN1 --------->ANAC58      <-------TEIL<---------LBD16         < -AtMYB77------>NtERF2<---------DEAR3(1)<---------ALFIN1    <---------TOE2(3)<---------DEAR3(1)------   gtgaaaatcgccgccgcggatgagccggtgccgacgccatggccacaccagttccacgcgctaatgttcatgaattactccggcgatctctcgatgatcg  8120900  Previous    Next  AGI:  At4g14080.1    Description:  MEE48 (maternal effect embryo arrest 48); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Probable glucan endo-1,3-beta-glucosidase A6 precursor (A6) [Arabidopsis Thaliana] (GB:Q06915); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT3G23770.1); similar to beta-1,3-glucanase homologue [Brassica napus] (GB:CAA49513.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 8118532    to: 8120353    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g14100.1    Description:  transferase, transferring glycosyl groups. Identical to Uncharacterized protein At4g14100 precursor [Arabidopsis Thaliana] (GB:Q67YC9;GB:O23269;GB:Q8LB66); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G23760.1); similar to unknown [Populus trichocarpa] (GB:ABK94230.1) Range:  from: 8120713    to: 8122412    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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