Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------DAG2       --------->TOE2(3)                --------->ARR11(3) -->HAHB4                               <---------ARR11(3) --->YAB1                          <----------ID1                                          --------->YAB1 ----ICU4                       --------->DAG2                                  <---------YAB1     -- -->ICU4                       ---------->DOF2                       --------->DAG2      <---------TOE2(3) ---YAB1------>ZmHOX2a(1) ---------->DOF2  <----------DOF2          ---------->DOF2     ---------->DOF2   tcacttcttcctcaaattgactagtttcgaaagtaaagcgaagaactttataatccaattccaaaaacccaaaagcgagattacaattgttaaagataac  8117800                                                          --------->ATHB12                 --------->WOX13(1)                                                   <---------LBD16                  --------->ANAC46                                           --------->ANAC58                         --------->ANAC58                                           --------->ANAC58                         --------->ANAC58                           --------->WRKY38(1)--------->ARR14(2)               ----------->HVH21                           --------->WRKY12--------->ANAC46                  <---------ANAC58                         <----------DOF2------->TEIL--------->LBD16          <---------ANAC46       -                   ------>ZmHOX2a(2)  --------->ZAT14    --------->ICU4      <---------ANAC58 -------           <---------GLK1(2)          <---------ZAT14 <------NtERF2          --------->ANAC55(2)  --- ------->MYB52(1)--------->ARR11(3)   <---------ZAT18--------->LBD16      <----------DOF2<---------ATHB12   aaaacagaggctagaatttgatctcgcctttgactcgcagtgaacccgaaatcgccggaatgatggaattcgaacactttcgtgacccgaaatcaatctg  8117900                                                   <---------HSFC1(2)                            --------->ARR14(2)     <---------HSFB2a(1)                --------->MYB52(1)                 --------->HSFB2a(1)               ----------->TGA1              --------->ZAT14               ----------->HVH21             <---------ZAT14              <---------MYB52(2)            <---------ANAC46                        <------ZmHOX2a(1)             --------->At4g35610        <---------ZAT14                --------->ANAC58 ---------------->AGL3   <------ZmHOX2a(1)  <---------ZAT6             --------->ANAC46 -->YAB1     <---------At4g35610        --------->ZAT14  ---------->DOF2          <---------TOE2(3) ---->TEIL<------ZmHOX2a(1) <---------ARR14(2)     --------->HSFC1(2)  --------->ANAC58   aacccaaaatcaggaaactgacgagaaggagaaccgtaagagagtagtgtagaaggtcccaaagaagaagtcgaagccatcgttgaggaagaggcgatga  8118000                                                                                                    -                                                                                                    -                                                                                                <----                                                                                                -----                                                                                               ------      --------->YAB1                                                                          <------ZmHOX2a(2)     --------->ICU4                                             --------->HSFB2a(2)          <-------     --------->KAN4(1) --------->ARR14(2)                       <---------HSFB2a(2)          --------    <---------KAN4(2)  <---------ARR14(2)                   <----------DOF2                  <------- ----------->GT1       ------->TEIL                  <------ZmHOX2a(1)                       --------   agaaggaataatcaggtttcagacgaatttgcatttgcagataagatgaagatgaggactgtctttatagaagaaatggaacagagagagaatgagatct  8118100                                                                 --------->LBD16                                                               <---------LBD16    --------->MYB52(1)                             --------->LBD16         <---------AHL20(2) -------->ANAC58                                  <-----------RAV1(2)    <---------RVE1(1) -------->ANAC58                                  --------->HSFC1(1)     <---------CCA1(1) -----HSFB2a(2)                                   <---------HSFB2a(2)   --------->ARR11(3)     ------ ---->HSFB2a(2)                                   --------->HSFB2a(2) ----------->ARR10        ------ >ZmHOX2a(2)                                      <---------HSFC1(1) <------ZmHOX2a(1)<-------TEIL <- --ARR11(3)                           ------>ZmHOX2a(2)   <---------At4g35610  --------->AHL20(2)  <- ->ARR14(3)           <---------MYB52(1)         ----------------->AGL3 <---------ARR11(3)----------- --ARR14(3)          <-------GAMYB  <---------ARR11(3)    --------->At4g35610<-----------TBP--------- ->ARR11(3) <-----------GT1         --------->ARR11(3) *TSS   --------->MYB52(1) ----------->TBP   --   cgaagcaaacgtagtaaccatgtcgttgtcttgattttgatcttcactggttccagaagaagctcaccggaggagatttttttatatatacattcaatta  8118200                             <---------YAB1                            <---------AHL20(1)                            <---------AHL20(2)                          <---------YAB1                   --------->ANAC58                        --------->YAB1                     --------->ANAC58                        <---------ICU4                    --------->SPL7                       <---------YAB1                     <---------TOE1(2)                       --------->ICU4                   <---------SPL7   <---------AHL20(2)--------->YAB1                    --------->TOE1(1) --->AHL20(2)        <---------ICU4                    --------->TOE2(1) --->YAB1           <---------YAB1                    <---------------AtSPL3                       <- --------AHL20(2)<---------AHL20(2)               <---------ICU4  --------->TOE2(3)               <-- --------AHL20(1)<---------AHL20(1)            --------->YAB1     <----------DOF2                 --- ->CBF           --------->AHL20(1)    <----------DOF2--------------->AtSPL3                    <---- >WOX13(1)   <---------AHL20(2)<---------AHL20(2) <---------GLK1(2)    <---------ZAT6           ----- ------->AHL20(2)--------->AHL20(2)  ---------->ID1   <---------------AtSPL8             <---------ANAC55(2)   aaaaatttatgtgttttaatttattattattatttttttgtctttttgctcataatctcgtacgaaaactttagtgttactcaatggaatcacatgagaa  8118300            <---------At4g35610         <------MYB83         <---------ANAC58 --------->YAB1         <---------ANAC58--------->ICU4         <------MYB46(1) <---------ATHB51        <-----------RAV1(1)        <---------MYB46(3)<---------ICU4                                                            < --------->ANAC46        <---------ATHB12                                                         <-- --------->ANAC58    ------>ZmHOX2a(2)                                                            --- --------->ANAC58    ----------------->AGL2                                                      ---- ----------GT1       <-----------------AGL2                                                      <--- -------ARR14(2)     ----------------->AGL3       <-----------------AGL2                  --------->TOE2(3) ------>ARR14(2) <---------YAB1         --------->AHL20(2)                     <---------ARR11(3)---- -----KAN4(2)  <---------At4g35610    --------->TOE2(3)                        --------->ARR11(3)---- ----->TaMYB80--------->ICU4     <----------DOF2 <---------At4g35610           --------->GLK1(2) <---   tatacgacatttggtgctgatgatccaattatggtctttacattaattcttagctaatttgggtttgtgtttatgtcagaaaatctaaaaattcttaaaa  8118400      <---------ARR11(3)      --------->ARR11(3)   <---------TOE2(3)  ---------->DOF2 ---------YAB1                                          --------->ANAC55(2) -------ICU4                                           <---------TOE2(3) ----->ATHB1                                    --------->ANAC58 ----->ICU4                        ----------->GT1    <-----------GT1 ------AHL20(2)          <----------DOF2      <---------ALFIN1                                      - ----->AHL20(2)        --------->At4g35610   --------->MYB46(3)                    <---------WOX13(1) ----->AHL20(1)        <---------At4g35610 ----------------------->TaNAC69(2)   <---------YAB1  <---- ------YAB1    <---------AHL20(2)---------->DOF2--------->ANAC58  <---------At4g35610        <-------   ttattaaagttcttgatttttttgcagctttagggcaaagtaaatctcccacccatttacgtttttgtagctgttacagtttgtgatagataattttgtt  8118500                                                          <---------AHL20(2)                                                          --------->AHL20(2)                                                       <---------ICU4                                                      --------->AHL20(2)                                              <---------YAB1                        --------->At4g35610 <-----------GT1                   <---------ICU4       --------->AHL20(1)--------->ATHB51                   --------->YAB1       <---------AHL20(2)--------->ATHB12                  --------->ICU4        --------->AHL20(2)<---------ICU4                <---------ICU4         --------->AHL20(2)--------->ICU4                        ------          ----------->GT1 <----------DOF2<---------ICU4--------->YAB1                          <----- -------->ATHB12--------->YAB1    ----------->GT1     <---------AHL20(2)   <---------------AGL15    - -----MYB46(3) <---------YAB1     <----------ID1   <---------AHL20(2)   <-----------GT1     --------- ----RAV1(1)   --------->ICU4    ----------->GT1  --------->AHL20(2)<---------AHL20(2) <---------ARR14(2)   gttgattagagaatgtaataataatcagctttgtaagggaaaaaaattactatttattaattatttgaattttttttctcaacatagcgaaacttgaagc  8118600           --------->AHL20(2)           --------->YAB1        --------->YAB1                                        --------->YAB1        ----------->GT1                                       <---------ICU4   ----------->GT1       <------ZmHOX2a(1)                   <---------ATHB12  --------->DAG2       --------->ANAC58                    --------->YAB1               ----------->HVH21 --->At4g35610         --------->ANAC58                 <----------DOF2                 ------>ZmHOX2a(1) ----At4g35610         <---------------AtSPL8  <---------KAN4(1)             ------>ZmHOX2a(1) --------->DOF2 ---------->DOF2                --------->KAN4(1)            --------->TOE2(3)       - ->DOF2<---------YAB1--------->CCA1(2)        <---------KAN4(2) <---------ANAC55(2)  ------>ZmHOX2a(1)   agaaaaggtataataaaaaaaagataaggaacaatattgagttatacgaataatccagctttaatcatgtgtcttcttcctcaagtcctcctcacagagt  8118700  Previous    Next  AGI:  At4g14070.1    Description:  AAE15 (ACYL-ACTIVATING ENZYME 15); long-chain-fatty-acid-[acyl-carrier-protein] ligase. similar to AMP-binding protein, putative [Arabidopsis thaliana] (TAIR:AT3G23790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39827.1); similar to hypothetical protein OsJ_012769 [Oryza sativa (japonica cultivar-group)] (GB:EAZ29286.1); similar to AMP-binding protein [Brassica napus] (GB:CAA96521.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) Range:  from: 8111957    to: 8118155    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g14080.1    Description:  MEE48 (maternal effect embryo arrest 48); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Probable glucan endo-1,3-beta-glucosidase A6 precursor (A6) [Arabidopsis Thaliana] (GB:Q06915); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT3G23770.1); similar to beta-1,3-glucanase homologue [Brassica napus] (GB:CAA49513.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro:IPR012946); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 8118532    to: 8120353    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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