Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->ANAC55(2)                                 --------->ANAC46                                 <---------ANAC55(2)                                 --------->ANAC58      --------->SPL7             --------->ANAC58    <-----------HVH21        <---------MYB52(2)   <---------ANAC58         ------>MYB46(1)   <---------ANAC58         ------>MYB83  <---------HSFB2a(1)     <---------MYB111(1)              --------->WOX13(1)           --------->TOE2(3)  <---------HSFC1(2)<---------HSFB2a(2)     --------->ANAC58                           <---------ANAC55(2)  --------->HSFC1(2)--------->HSFB2a(2)     --------->ANAC46                         --------->AHL20(2)  --------->HSFB2a(1)     <---------MYB59   --------->ANAC58 <---------ATHB12--------->ATHB12   gagaagcgtcccccatcaacttcgagtaccaacttacgcaaattgcaggcaaatgcaatgccaatcaattttgcagtattcattgaattacataaatgta  8067300                                  <---------DAG2                                ------>NtERF2                               --------->ARR14(2)                         --------->ARR14(2)            <-------TEIL <---------ARR14(2)           --------->AtLEC2<---------LBD16---------->DOF2 <-----------GT1         --------->At4g35610 --------->LBD16          <----------DOF2                             ---       <---------------------WRI1 <----------DOF2 <---------ZAT18                               -----   aatgaactatgagatgcaaactatgcagaaccggagccttatgtgaaagcagagcccttttaacattctttgaaaatgttttgaattcatgtctctgatc  8067400                                       <------------AtMYB77                                     --------->ARR14(2)                                 --------->ANAC46                                                   <                                --------->LBD16                                                     <                         <---------ARR11(3)                                                         -                         --------->ARR11(3)     <---------ANAC58                                    -      ---------->DOF2   --------->REM1(1)       <---------ANAC58                           ----------     --------->YAB1   ----------->RAV1(1)       <---------ANAC46                        --------->ANAC58 ------->DOF2      --------->ANAC46 <---------GLK1(2)                   --------->ANAC46--------->ANAC58 ->ZmHOX2a(2)<---------ANAC46  ----------->RAV1(1)                      ------->GAMYB <------ZmHOX2a(1)   taaagaatcaaagttgagtttaggcaacatcttccacagaaactgccattgcttagacaaaacactcgtggtaacagcaacttctgtaggaagcaaagac  8067500                                   ------>ZmHOX2a(2)                              <---------WOX13(1)                            --------->MYB52(1)                           ----------->HVH21            ---------->DOF2------->GAMYB           --------->YAB1 <---------MYB52(2) --------->At4g35610     <---------At4g35610                                       ----------->RAV1(1) ---------ARR11(3)   --------->ANAC58                                  ------>NtERF2 ---------ARR14(2)   --------->ANAC58     <------NtERF2             <---------At4g35610       ------- -------->ARR14(2)   --------->ANAC46------>ZmHOX2a(1)              --------->At4g35610---------->DOF2 -------->GLK1(2)  <-----------RAV1(2)    --------->LBD16 <---------ALFIN1---------->DOF2     ------- >DOF2  --------->YAB1   --------->At4g35610   --------->YAB1   <----------DOF2 --------->AtMYB61   agtatctgaataatcaaagcctcaggcaactgactgatcctgtccgcattcacaatacctcgacctcttttgctgccaaagaccacaacaaaagacacga  8067600                                                            <---------MYB52(1)                                                           <-----------HVH21                                                          ------->GAMYB                                                         --------->DEAR3(2)                                    ------>ZmHOX2a(1)    <------------AtMYB77                                   --------->TOE2(3)     --------->MYB46(3)                              <------ZmHOX2a(1)         -------->P--------->ATHB12                            <---------TOE1(3)           <---------At5g28300        <---------TOE2(3)   --------->ANAC55(2)        --------->MYB52(1)<-----------RAV1(2)       <- -->ANAC58                  <---------TOE2(3)        <---------MYB52(2)<-----------HVH21          <-- -->ANAC58             <---------ZAT6         ---------->DOF2 <---------DEAR3(2)  <------------CBF<--   attggtttttaagttttggagattactgttaaggaatcctaaaacatagaaagaaactaaccgtcgtttcattggtcaggtttgtattgaagaattttgt  8067700                      <---------At4g35610                                                           -           <------MYB46(1)  --------->LBD16                                                         -           <------MYB83  ------>NtERF2                                                              -          <---------AtMYB61<---------ANAC46                                <---------GLK1(2)       <-         <--------P   --------->At4g35610                             <------ZmHOX2a(1)            -- ------GAMYB        <---------RAP2.6(2)                    <---------TOE1(3)                   <----- -------ANAC58   <---------ARR14(2)                        <---------TOE2(3)                   ------ -------ANAC58   --------->ARR14(2)     --------->DAG2<---------ZAT6<---------TOE1(2) --------->ICU4<   gcgttgatggagttggtcgaattcggctgccgtagaaagtataaggcgaagtagaagagttagggtttcgaaggatagaatttgtgtaatttttgaagat  8067800 -------->ATHB12 -------->YAB1                            <---------AHL20(2) ------->HAHB4                  <---------AHL20(2)                                          --------- --------YAB1             <---------AHL20(2)    <---------ANAC58          <---------YAB1 --------->HSFB2a(2) ------->ICU4             --------->AHL20(2)    <---------ANAC58     <---------TOE2(3)   --------->HSFC1(1) ----ARR11(3)            --------->AHL20(2)  <-----------GT1<---------ANAC46             <---------HSFB2a(2) --->ARR11(3)      <-----------GT1     ------->TEIL      <---------AHL20(2)   <-----------GT1 ---------ICU4  --------->YAB1<---------AHL20(2)<---------ANAC46    ---------->DOF2      <---------HSFC1(1)   aatgattagtcgcataagtcataaccatttattttaaaatgtatttttttccttggaaatttatgtgtattaaagtattatttctatatttctagaatga  8067900                                       --------->MYB52(1)                                    --------->ANAC46                                   <---------------AGL15                                   --------------->AGL15        XXXXXXXXXXXXXXXXXXX>MIR866-3P                                  <-----------------AGL1--------->ANAC55(2)                                 <---------ZAT18--------->ARR11(3)                                 <-------TEIL   --------->GLK1(2)             ----------->GT1     --------->ZAT18<---------ARR11(3)            --------->DAG2   <---------------AtSPL8     <---------ANAC55(2) >YAB1    ---------->DOF2---------->DOF2  ----------->GT1    --------->YAB1   caaattcaaactaaaaggtaaaaacagaaaagaagtacacataatggaaaaatctattacatatcaaaatccatcgtagaagacgtttgaatgggaaaca  8068000                                --------->RAP2.6(2)                                ----------->RAV1(1)                               <----------ID1                             --------->ANAC46                             --------->ANAC58                    <---------ANAC58                                                           ------                    <---------ANAC46  ----------->GT1                                     -----------                    <---------ANAC58---------->DOF2     <-------TEIL                  --------->AHL20(2)              ---------->ID1 --------->ANAC58    ----------->GT1                      <---------AHL20(2)          <----------DOF2  ---------->DOF2  --------->AHL20(2) <<<<<<<<<GATA-1     --------->TOE2(3)   tggtgctaatgtctttgttgtttcttggttaaagccacaaaagaaaaaaaatagtatatacatttatctattgtctacttgagaacattaaaatgtaaaa  8068100                                                                                  <---------------AtSPL8                                                                                  --------------->AtSPL8                                                                                <-----------RAV1(1)                                                                               <---------YAB1                                                                             -------->ATHB1                                                                             <---------ICU4                                                                             --------->ATHB12                                                                            <---------ATHB51                                                                            <---------AHL20(2)                                                                            --------->ICU4                                                                            <---------YAB1                                                                            --------->AHL20(1)                                                                         --------->ICU4 <---------ARR11(3)   <---------MYB52(1)                                                    <---------AHL20(2)  <-------GAMYB                                                          --------->AHL20(2)<--------- ---->DOF2        <-----------GT1                           --------->STY1(2)--------->ATHB51    <--- >GT1 <---------TOE2(3)         ------->TEIL    <----------DOF2   <----------DOF2 --------------->AtSPL3   agtctgttaagaatatagtttttcttcttaaatgtatgttaagagaatagctttaaatctatagctagctttgaaaaaattattgttgtacatctttatg  8068200  Previous    Next  AGI:  At4g13965.1    Description:  F-box family protein. Identical to Putative F-box/LRR-repeat protein At4g13965 [Arabidopsis Thaliana] (GB:Q3EA38); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G26920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63569.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 8066699    to: 8067672    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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