Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------ANAC58                                 <---------GLK1(2)                --------->AHL20(2)      --------->CCA1(2)      ------>ZmHOX2a(2)           <-----------GT1  --------->ZAT18          --------->AGP1 <---------ANAC58        <---------AHL20(2)              <--  <---------ZAT18          --------->ARR11(3)         ----------->GT1               ----------->GT1 -   ttagcgcgatacaagcgggactataaactgatctagattgtttttcttgggaaaaaatgttacaaattttaaatatgtagtttgaattgttaaaccaaga  8054500                                                                                             <-------                                                                                          <---------MYB52(1)                        ----------->RAV1(1)                                              <-------GAMYB              --------->At5g28300                                                        <-----------HVH21              --------->LBD16                               <---------GLK1(2)       ------>NtERF2             <---------ANAC46                           --------->At4g35610        <---------bZIP60(1)             ----------->GT1                            <---------At4g35610        <---------RAP2.3(3)             --------->TOE2(3)                     --------->CCA1(2)               --------->bZIP60(1)           <---------At5g28300    --------->YAB1  --------->ARR11(3)               <---------RAP2.6(2)   ------->GAMYB        --------->MYB52(1)    ---------->DOF2                     --------->RAP2.6(3) -----TEIL<-----------GT1        <---------YAB1   <---------ARR11(3)            ----------->HVH21 ---------->RAV1(1)--------->AHL20(2)--------->YAB1--------->GLK1(1)           <-----------HVH21   ttcaacagaaatataccgtaaataaacaacagttgataatagtcatcgaaaagatatcaactgattcttcacttgggctactgtgacggcccgttagggt  8054600                                                                 --------->MYB46(3)                                                                 <---------MYB55(2)                                                                 --------->DEAR3(1)                                                             <---------ZAT18                                                             --------->ZAT18                                                         ------->MYC2                                                         ------->MYC3                                                         ------->MYC4                                                         <-------MYC4                                                         ------->PIF5                                                         <-------PIF5                                                         <-------MYC2                                                         <-------MYC3                                                        <<<<<<<<<<AtMYC2                      -------                                                        <<<<<<<<<<ABI5               <------ZmHOX2a(2)                                                        <---------TGA1a --------->ANAC46      -------                                                        --------->TGA1a --------->TGA1a    --------->TOE2(2)                                                        <---------O2    --------->O2<-----------ARR10                                                        ===========================================MYC_MYB                                                        <<<<<<<<<<HY5   --------->bZIP60(2)--------->TOE1(2)                                                        --------->bZIP60(2)      --------->SPL7                                                        <--------ABF1   ===========================MYC_MYB                      <------ZmHOX2a(2)                 --------->O2  ----------->RAV1(1)  ------->GAMYB                     --------->ARR11(3)                 --------->ANAC55(2)    <-----------HVH21                     <---------ARR11(3)                 <---------ANAC55(2)    --------->ORA47(1)  --                --------->TOE1(2)                     <---------ALFIN1<---------ALFIN1   --------->ANAC46              <---------ICU4                          <------------OsbHLH66    <---------SPL7 ------- --TOE1(3)   <---------ATHB12               --------->AHL20(2)<---------ALFIN1--------->DEAR3(1)   --   tctcaatataagtcaataactacgatctacgattcactgaaacaaataaaacacagccacgtgtccaccctcccacatcaccgtccgatctaacccacga  8054700                                                                            ------>MYB83                                        <---------MYB52(1)                  ------>MYB46(1)                                 --------->ALFIN1                         <---------MYB55(2)                           <---------ZAT14                                <---------MYB46(2)                           --------->ZAT14    <---------LBD16             --------->MYB46(3)                         <-------MYC2  <-----------TGA1                   <---------MYB111(1)                         ------->MYC2  <-----------HVH21                  <---------MYB111(2)                         <-------MYC3 <---------ANAC58                    --------->AtMYB61         <---------LBD16 <-------PIF5 <---------ANAC55(2)             --------->MYB46(3)     --------->REM1(1)   ------->PIF5 --------->ANAC55(2)            <------ZmHOX2a(2)              < -->ANAC58   <-----------HVH21 <---------ANAC58                     --------->AGP1                 <- -->ANAC58<---------ANAC55(2)  <---------ANAC46                     <---------ARR14(2)         ------ ------->ANAC58          ------->MYC3 <---------ANAC58              --------->ARR14(2)     --------->YAB1 -->ANAC46--------->ANAC55(2)  <---------ANAC58--------->ANAC46     <---------ARR11(3)------------>CBF ------->ANAC58          ----------------------->TaNAC69(2)    -------->P--------->ANAC46--------->GLK1(2)   caagcttacaacacgggtcataccgctcgtgcagcgtgttccgtcatccacgggattacaacttctaccagatccaccaaaccctcaaaacaatctgaac  8054800                                                                 --------->ZAT14                          <---------GLK1(2)                --------->ANAC58                     -----                        <---------AHL20(1)                 --------->ANAC58                     <---- -------TEIL<-----------GT1      <-----------HVH21         <---------ALFIN1               <----------DOF2 --------MYB52(1)       <---------ARR11(3)            ------>ZmHOX2a(1)                ------>NtERF2 ->TEIL  <---------ICU4----------->TBP    <----------DOF2*TSS<---------ALFIN1       ------>NtERF2   cgttcatttcattttgacctcatctatatattctctgtcactccctttctcttctcctcgcacacacttctctctctctctctctctgcctcctttcgga  8054900           ------>ZmHOX2a(2)         --------->HSFB2a(2)  --------->REM1(2)          <------ZmHOX2a(2)    <---------ANAC58        <---------ANAC46         <-----------ARR10     <---------ANAC58    --------->ALFIN1         <---------ARR14(2)  xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         --------->ARR11(3) <<<<<<<<<MYB2        ================================bZIP_DOF         <---------ARR11(3)================================MYC_MYB         --------->ARR14(2)<-------GAMYB         --------->TGA1a         <---------AGP1   <---------ANAC58       <---------O2         --------->AGP1   <---------ANAC46       --------->O2         ---------->DOF2        <---------CCA1(2) <---------bZIP60(2)    <---------TGA1a     <---------WRKY12 <---------CCA1(2)        <---------ANAC58 --------->ARR11(3)        <---------WRKY38(1) ---->ARR14(2)      <---------ATHB12 <---------HSFB2a(2)--------->At5g28300 -----ARR14(2)      --------->MYB46(3)     <---------ARR11(3)      <-----------HVH21     <---------ARR14(2)   ttcaaatctcagatctagctcaaccatggcgttgctcgtcgagaagacctcaagtggccgtgaatacaaggtcaaagacatgtctcaagccgatttcggt  8055000                                                               <---------HSFC1(2)                                                               <---------HSFB2a(1)                                                        <---------ARR14(2)                          -                                                        --------->ARR14(2)                         --                                                     <---------MYB59                               <-                                                    <-----------------AGL1                         <-                                                    ----------------->AG                          <--                                                    ----------------->AGL1                        <--                                                   --------->SPL7                                 <--                                                 <---------SPL7--------->HSFB2a(1)                <--                                                <---------ANAC58                                  ---                                                <---------ANAC58              ---------->DOF2     <--                                           <---------ANAC46    --------->HSFC1(2)                <---                 --------->DEAR3(1)        <---------ANAC58   --------->ARR14(2)                 <---           --------->ZAT2                  <---------ANAC58   <---------ARR14(2)                -----           <---------ZAT2     <---------ANAC46 ---------->ID1 <-----------ARR10               <------ <---------HSFB2a(2)      <---------At4g35610  <---------------AtSPL3      --------->AtLEC2  -------- --------->HSFB2a(2)      --------->At4g35610  --------------->AtSPL3 --------->ANAC46      <--------   cgtctcgaactcgagctcgccgaagttgagatgcctggactcatggcttgtcgtaccgaattcggaccttctcagccattcaaaggcgctagaatcaccg  8055100 ----->ZmHOX2a(2) ------->GLK1(1) -----ZmHOX2a(2) --------GLK1(1) ---------ARR10          --------->DEAR3(1) -------ARR14(2)      ------->GAMYB                                                          -------- -------ARR11(1)      --------->DEAR3(1)                                                     -------- -------AGP1         <---------MYB55(2)                                                      -------- ------>ARR14(2)     --------->DEAR3(2)                                            --------->ARR11(3) -------ARR11(3)     --------->MYB46(3)                                           --------->REM1(1) ------ARR14(1)    --------->ANAC46                     --------->At4g35610     ----------->RAV1(1) ------CCA1(2) ------>MYB46(1)                          <---------At4g35610  ------>ZmHOX2a(1)<------ ---->LBD16    ------>MYB83                    --------->ZAT14    <---------At4g35610 =============== ---LBD16----------->HVH21                 --------->MYB52(1)     --------->At4g35610 <----------DOF2 ->MYB52(1)    --------->AtLEC2         --------->TOE2(3)       <-----------RAV1(2)<---------ARR11(3) ---GT1--------->ANAC55(2)<---------SPL7--------->TOE1(3)       ============================RAV   gatctcttcacatgaccatccaaaccgccgtactcatcgaaaccctaactgctctcggtgctgaagtcagatggtgttcctgcaacatcttttccactca  8055200              --------->MYB46(3)             ------>NtERF2            --------->RRTF1(3)            --------->DEAR3(1)            --------->RAP2.3(3)           --------->ATERF1(1)           --------->RAP2.3(1)           --------->ERF1           <------NtERF2          <---------At4g35610          --------->At4g35610          <---------ATERF1(1)          <------NtERF2          ------>NtERF2          --------->ABI4(1)        --------->RAP2.6(1)        --------->ATERF1(1)        <------NtERF2        --------->RRTF1(1)        --------->RAP2.3(1)       ------>NtERF2       --------->ABI4(1)       <---------ATERF1(1)      --------->RAP2.3(2)      --------->DEAR3(1)      <---------DEAR3(1)      --------->ANAC46      --------->RAP2.3(3)     --------->RRTF1(1)     --------->DEAR4(2)     --------->ORA47(2)     --------->RAP2.6(1)     --------->ERF1               --------->At4g35610     --------->RAP2.3(1)          <---------At4g35610     --------->ATERF1(1)          ------>NtERF2    <---------ATERF1(1)          --------->RAP2.3(2)                                       --------->ZAT18    ------>NtERF2                --------->DEAR3(1)                                      --------->ZAT18   --------->O2                 --------->RAP2.3(1)                               ------->TEIL   --------->ANAC58            ------>NtERF2                                    <---------SPL7   --------->ANAC58     ----------->HVH21                                       <---------ZAT14   --------->bZIP60(2)======================================bZIP_DOF           <---------ANAC58   --------->ANAC46   --------->TGA1a                                          <---------ANAC58 <---------ALFIN1     <---------TGA1a                                          <---------REM1(1) ->ANAC58--------->DEAR3(1)    --------->LBD16<---------HSFB2a(2)           <---------AtMYB61 ->ANAC46--------->RRTF1(2)    <---------ATERF1(1) --------->DAG2        <-----------RAV1(1)     ---- ->ANAC58--------->RAP2.3(2)  --------->DEAR3(1) ---------->DOF2<-----------RAV1(2)      <---------ZAT18 ---ATHB12--------->LBD16     --------->ANAC46--------->HSFB2a(2)  <------ZmHOX2a(1)    <---------ANAC58 ===============================bZIP_DOF    ----------->RAV1(2) =====================RAV<---------ANAC58   agaccacgccgccgcagccatcgctcgtgactccgccgctgttttcgcctggaaaggtgagactcttcaggagtactggtggtgtaccgagcgtgctcta  8055300                                                                                             <-------                                                                                             --------                                                                                         ============                                                                                         ============                                                                                         ------>ZmHOX2a(2)                         <---------YAB1                                                 <------ZmHOX2a(2)                        ------>ZmHOX2a(2)                                               =============                      --------->ARR14(2)                                               <---------ARR14(3)                    ------>ZmHOX2a(1)                                                  --------->ARR11(3)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                 <---------ARR11(3)               <---------MYB46(3)              --------->ANAC58                        --------->ARR14(2)              --------->ALFIN1                 <---------bZIP60(1)                     <---------ARR14(2)            <---------MYB46(3)              ----------->TGA1                           --------->ARR14(3)           <---------AtMYB61                ----------->HVH21                         <---------GLK1(1)           <---------DEAR3(1)         <---------AtMYB61                               --------->GLK1(1)           --------->ALFIN1  <---------MYB46(3)--------->ANAC58--------->YAB1       <------ZmHOX2a(1)         xxxxxxxxxxxxxxxxx>smallRNA(se3) --------->ALFIN1 <---------YAB1      <---------At4g35610         <---------ZAT2<---------At4g35610<---------MYB46(3)  <-------TEIL    --------->At4g35610       <-----------RAV1(2)  <---------WOX13(1) --------->bZIP60(1)         ---------->DOF2<----------DOF2 ----->ATHB12 <---------AtMYB61    <---------YAB1      <----------DOF2  <-------GAMYB----------->ARR10   gattggggtccaggtggtggtcctgatctgattgttgatgatggtggtgacgctactcttttgattcatgagggtgttaaagctgaggagatctttgaga  8055400  Previous    Next  AGI:  At4g13940.1    Description:  HOG1 (HOMOLOGY-DEPENDENT GENE SILENCING 1); adenosylhomocysteinase. Identical to Adenosylhomocysteinase 1 (SAHH1) [Arabidopsis Thaliana] (GB:O23255;GB:O81847;GB:Q8LE20); similar to SAHH2 (S-ADENOSYL-L-HOMOCYSTEINE (SAH) HYDROLASE 2), adenosylhomocysteinase [Arabidopsis thaliana] (TAIR:AT3G23810.1); similar to unknown [Populus trichocarpa] (GB:ABK96105.1); similar to S-adenosyl-L-homocysteine hydrolase [Chrysanthemum x morifolium] (GB:ABQ18314.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64242.1); contains InterPro domain S-adenosyl-L-homocysteine hydrolase, NAD binding (InterPro:IPR015878); contains InterPro domain NAD(P)-bind Range:  from: 8054857    to: 8057134    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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