Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------YAB1 ------At4g35610            <---------TOE1(2)                <---------At4g35610     --------->YAB1 ---At4g35610   <---------AtLEC2      ----------->RAV1(2)    --------->At4g35610    --------->ICU4 -->At4g35610  <-------TEIL------>ZmHOX2a(1)       <------MYB46(1)                 <---------KAN4(2) --MYB46(3) <------ZmHOX2a(1)        ------->TEIL  <------MYB83           --------->YAB1  <---------YAB1   gcttatttaacagaggatgcatgggcctcctagtttccgaacctgatgatgttcggtttcaagagctgaaattgaattgtaacagaatgatcaatatagt  8043400                                                                   <---------ICU4                                   --------->ANAC46         --------->GLK1(2)                                --------->MYB52(1)         <---------GLK1(2)                        -                       --------->ZAT14           ---------->DOF2   --------->YAB1            <-------                    <---------ANAC46  ----------->RAV1(1)----------->ARR10  --------->YAB1  <--------           <---------YAB1       --------->ARR14(2)   <------ZmHOX2a(1)  <---------YAB1 <---------ATHB12   tagaccagttgtcactattgttctgtagactcactatcggccacatatatacaaaggactagattctaagcatcactataaaaaaaccaataaactttca  8043500                                                    <---------At4g35610                                                    --------->At4g35610                                                  <---------ALFIN1                                                ----------->RAV1(1)                                                <---------ALFIN1                                               <------NtERF2                                              ------>NtERF2                                           <------MYB46(1)                                           --------->At4g35610                                           <---------At4g35610                                           <------MYB83                                           <---------ATERF1(1)                                          --------->ALFIN1                                          --------->MYB55(2)                                          <---------MYB46(3)                                         <---------ANAC46                                         <---------MYB55(1)                                        <-------GAMYB                                        <---------At4g35610                                        --------->At4g35610                                        <---------ZAT2                                        --------->ATERF1(1)                                        =============================MYC_MYB                                        ====================RAV                                        <------NtERF2                                        ----------->RAV1(2)                                       <---------RAP2.3(1)                                       <---------RRTF1(1)                                       ------>NtERF2<---------ZAT2                                       <---------ERF1                                      <---------ANAC58                                      <---------RRTF1(2)                                      <---------RAP2.3(2)                                      <---------DEAR3(1)                                      <---------ANAC58<---------ZAT18                                      <---------ANAC46----------->HVH21                                      <---------RAP2.3(3)    ----------->RAV1(2)                                     --------->RAP2.6(3)   --------->ANAC46                        <-----------GT1<---------MYB46(3)  --------->TGA1a               <-------TEIL                     <---------GLK1(1)--------->ATERF1(2)  --------->ANAC58      --------->ARR14(2) -                    --------->ARR11(3)<---------RAP2.6(2)  --------->ANAC58      <---------ARR14(2) - ---------->GT1     <---------ARR11(3)<---------ATERF1(2)<---------ALFIN1     <---------TOE1(2)     - ----HVH21      ---------->DOF2    --------->ALFIN1 --------->ZAT2            <---------TOE2(2)     - --DOF2   --------->AHL20(2)  --------->MYB52(1)=========================RAV <-----------RAV1(2)  <--   gagggtttctaataaactaaaagatttcaccataacagtggcggctggtgccacagctcacacgcctgtcttcatcaactcaggttccagtttcattctc  8043600                                                                   --------->ANAC58                                --------->ANAC58                   --------->ANAC58                                --------->ANAC58                   --------->ANAC55(1)              <                                --------->AtLEC2                   --------->ANAC46                 -                                --------->ANAC46                 <---------ALFIN1                   <                               <-------MYC3                      --------->MYB52(1)                 <               --------->HSFB2a(2)                              <---------REM1(2)                   <               --------->HSFC1(1)                              <---------ALFIN1                     -               <---------HSFC1(1)    --------->MYB46(3)     --------->ANAC46                       <- -------->ANAC55(1)            <-------MYC2                 <---------ALFIN1                       -- -------->ANAC46               ------->MYC2    ---------->DOF2 --------->AtMYB61             -------- -------->ANAC58     --------->TOE1(2) ---------->DOF2  --------->MYB46(3)                  <-------- -------->ANAC58  <<<<<<<ZML2  ------->MYC3 --------->TOE2(3) --------->ANAC46              <-------- -------ALFIN1 <---------HSFB2a(2) ----------->RAV1(1)<-----------GT1                       <--------   acacggcatttcaatctctagaacgagggaacacatgcaacaaaagcctcaaagattaacctccaccacacggcaagagaactgcgatgaatagtcaaag  8043700 --------->KAN4(2) --------->ARR14(2) <---------ARR14(2) ---------HSFC1(2) -------->KAN4(1) ---------KAN4(1) ----------TaMYB80 ---------HSFB2a(1)                                           <---------AHL20(2) -------->HSFB2a(1)                                          <---------AHL20(2) --------KAN4(2)                                             --------->AHL20(2)             --------- -------->TaMYB80                                            <---------AHL20(1)          <---------ATHB12 -->DOF2                                   <-----------GT1   --------->AHL20(1)          --------->ICU4 -WRKY38(1)  <---------LBD16     <---------HSFB2a(2)     <---------AHL20(2)          ------------>CBF -WRKY12    <-----------RAV1(1)  --------->HSFB2a(2)   <----------DOF2          ------------>CBF  *TSS -WRKY45    <---------ANAC46 <----------DOF2     --------->WRKY18(1)    <---------ARR14(2)--------->YAB1   gaatattcgattttctgtggaagcgattagtctttacagaagaattttcaagtcaagctttaatttatttcgaaaatatggagacaatccaatgatcaat  8043800                           --------->YAB1                          <---------ATHB12                         ------>MYB46(1)                         ------>MYB83                        --------->WOX13(1)                     XXXXXXXXXXXXXXXXXXXX>MIR420               --------->YAB1   <---------AHL20(2)                --------->AHL20(2)                             --------->AHL20(2)     --------->At4g35610             --------->AHL20(2)                             --------->YAB1  <---------ANAC46            <---------AHL20(2)                        --------->YAB1    <---------ANAC58 --->CBF    --------->AHL20(2)                       <---------YAB1     <---------ANAC58    <--------   tcgtttcacagaaaataaataaaaaccaatcacagaaaaaacattctacagcaagatgataacaataatatggagcttgtgtttaatcttctgcctttca  8043900                                                                                               <-----                                                                                            ---------                                                                                           <---------ARR14(2)                                                                                           <---------GLK1(2)                                                                                           --------->ARR14(2)                                                    <----------DOF2                 --------->ANAC46                  ---------->DOF2 --------->HSFB2a(2)                               --------->ANAC58 --DOF2   <---------YAB1          <---------HSFB2a(2)                               --------->ANAC58   aactcaatacttgttattgctaaagacttgtgtcttccagaccagagggatgctcttttggagttcaagaacgagttctctatcccaagccccgattctg  8044000                             --------->ALFIN1                           <---------ANAC46                         --------->ZAT14                      <------MYB46(1)                  ----------->HVH21                           <------MYB83                    <------                  --------->ANAC46                            ----------->GT1                <-------                  --------->ANAC58                           --------->ALFIN1              <---------MYB46(3)        <---------GLK1(2)<---------ZAT14                   <---------ANAC46               <---------AtMYB61      <---------YAB1   --------->At4g35610                 <---------ANAC58               --------->ALFIN1    <---------At4g35610<---------At4g35610    <---------WOX13(1)               ------>ZmHOX2a(1) ----YAB1         --------->ANAC58<------ZmHOX2a(1)        <---------ANAC58  ------>ZmHOX2a(2)------- >GLK1(2)       <---------At4g35610         --------->ATHB12 <---------AtMYB61--------->TOE1(2)<-----   atttgatgctgattcttcagacgacagcgaagtggaggaacaacactgattgctgttcttggggtggtatctcttgtgatcctaagacgggagtggtggt  8044100                                                                                                <----                                                                                              -------                                                                                           ------>ZmHOX2a(1)                                                                                     ------>ZmHOX2a(2)                                                                                     =============HOX2a_HOX2a                                                                                    ==============HOX2a_HOX2a                                                                                    <------ZmHOX2a(2)                                                                                   --------->ARR11(3)                                         ------>ZmHOX2a(2)                         <---------ARR11(3)                                        <------ZmHOX2a(2)                          <---------AGP1 ---                      ------>ZmHOX2a(2)--------->ARR11(3)                          --------->AGP1----                     --------->At4g35610--------->CCA1(2)                          --------->ARR14(2)         --------->TOE1(1)      <---------RAP2.6(3)                                <---------ARR14(2) ---MYB46(3)        <---------ARR11(3) --------->AGP1               --------->ARR11(3)     ========== --AtMYB61          --------->ARR11(3) <---------ARR11(3)       --------->REM1(1) <---------CCA1(2) - -->MYB55(2)       --------->ZAT14    --------->GLK1(1)    --------->ZAT6        ----------->ARR10<-- --GAMYB<---------LBD16         <---------SPL7 --------->At4g35610  <---------ARR11(3)<----------DOF2   tgagttagacctcggaaacagtgatctcaatggccgtctgagatctaatagcagcctgtttagactacaacatcttcagagcctagatctttcctacaat  8044200              --------->MYB52(1)              ------>MYB46(1)         ------->TEIL     --------------->AtSPL8    <---------ANAC58    <---------ANAC46    <---------ANAC58 <----------DOF2            <------NtERF2                       <---------ANAC58 -----ATHB12  ------>MYB83 --------->RAP2.6(2)                  <---------ANAC58 -->YAB1 --------->ZAT18 <---------At4g35610                    <-------GAMYB ------>ARR11(3)    --------->GLK1(2)                          <---------MYB46(3)          --------->ANAC46 ----->YAB1   -------->P --------->At4g35610                  <---------TOE1(2)          ------>ZmHOX2a(1) ======HOX2a_HOX2a --------->ARR14(2)                  ------->TEIL                  --------->GLK1(2) ----->ZmHOX2a(2)  <---------ARR14(2)                 <-----------GT1               <---------GLK1(2) -------ARR11(3)   <---------GLK1(2)               --------------->AtSPL8  <----------DOF2 --------->REM1(1)   gatctttcgtgtaccctaccagattccagcggcaacttcaaatatttgagagttttgaacctccttggttgcaatctctttggagagattcctacatcac  8044300  Previous    Next  AGI:  At4g13920.1    Description:  disease resistance family protein / LRR family protein. similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT5G27060.1); similar to disease resistance family protein / LRR family protein [Arabidopsis thaliana] (TAIR:AT4G13810.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT3G11080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41181.1); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 8043798    to: 8046554    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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