Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <-----------GT1                                                   <---------ICU4    --------->HSFB2a(2)                         --------->YAB1                                      -    <---------HSFB2a(2)           ---------->DOF2  --------->AHL20(2)                             --- -----WOX13(1)                 --------->HSFB2a(2)<---------AHL20(2)          <---------ANAC58    <-- -->ATHB12                     <---------HSFB2a(2)--------->AHL20(2)          <---------ANAC58   xxxx   tgttttctaaaaactatagttttcttaagttttctaaaaagaccattgaaaaataatttcacattagtccatagaaaaatgcgtccatggaatattaaac  7969900                                                   <---------AHL20(2)                                                <---------AHL20(2)                                                --------->AHL20(2)                                                <---------ICU4                                                <--------ATHB1                                                --------->ATHB51                                               --------->ICU4                                               <---------YAB1                                          --------->YAB1                                      --------->TOE1(2)                                     <---------At4g35610--------->YAB1                                    --------->ANAC58 --------->YAB1 ---------->DOF2                                  ---------->DOF2  --------->AHL20(1)                                 <---------MYB52(1)<---------AHL20(1)                                <-------GAMYB--------->YAB1   --------->YAB1               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------AHL20(2)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->AHL20(2) ---------->HVH21      --------->GLK1(2)  --------->TOE2(3)   --------->ANAC46                 <----- ------>At4g35610     --------->ARR14(2) <---------YAB1 --------->AHL20(2)                     ------ -------At4g35610     <---------GLK1(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------AHL20(2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->ANAC58--------->AHL20(2)        --------->AHL20(2)   tgctgaccttatacacacttaagagattctctaccgttaagctacgataataatttaataatattcgtaacaaagtatatttatatactaacaaatatca  7970000                                              <---------AHL20(1)                                     --------->MYB52(1)--------->DAG2                                     <-----------GT1  ---------->DOF2                                  --------->YAB1   --------->AHL20(2)                          --------->AHL20(1)  --------->AHL20(2)      --------->AHL20(2)  <---------AHL20(1)  --------->AHL20(1)                 <-----------GT1      <---------AHL20(2)  --------->AHL20(2)  <---------AHL20(2)               --------->KAN4(2)    --------->ANAC55(2)   <---------AHL20(2) <---------AHL20(2)               <---------ICU4  <---------AHL20(2)     <---------ATHB12    --------->AHL20(2)    <---------AHL20(2) ------GT1--------->AHL20(2)  --------->AHL20(2)   <---------AHL20(2)       --------->TOE2(3) --->ZAT6 <---------AHL20(2)  <---------AHL20(2)  --------->AHL20(2)     <-----------GT1      <------   ctatttaagtaattaaaaacttatgcaataaattaaaaataacgaaattaaatttaaaaagttggctatttttttttacattattccccttccattttac  7970100                                                                                      --------->LBD16                                                                                     <---------LBD16                                      --------->YAB1                                <---------LBD16                                     <---------ATHB12                              ------->TEIL                                   <-----------GT1                              <----------DOF2                                 --------->AHL20(2)                           --------->At4g35610                                 <---------AHL20(2)               ---------->DOF2<---------SPL7                             <---------AHL20(2)              ----------->HVH21<---------At4g35610                            <---------YAB1               ------->GAMYB        <---------ZAT2                          <---------ICU4                --------->ANAC58      ----------->RAV1(2)    <---------YAB1    <---------AHL20(2)                --------->DEAR3(1)    --------->ZAT2  <------ -----GT1             --------->AHL20(2)                --------->ANAC58    <-----------RAV1(2)   aacattttgattttgtattgttttttaatttttattttaatcatacaaatgaaaaacaacgccctgaccaaagaagacccagctgtaccgggacaagatt  7970200                <-----------GT1              --------->DOF5.7(2)             --------->TOE2(3)       ----------->GT1             <----------DOF2       ----------->GT1                                                  -     <------MYB46(1)             --------->REM1(2)                                                ---     <------MYB83        <-----------HVH21 ---------->DOF2                                     ------ ------CBF   --------->TOE1(3) --------->LBD16 ---------->DOF2        *TSS         --------->YAB1 ---   gcacatttggttcaactttaacctctccgtctccgagtagagaaataaagaaagagagagagactcatcaaaaacatttccaaaatcaaaatccatggcc  7970300                                                                           ----------->RAV1(2)                                                                      --------->LBD16                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                     --------->ANAC46                                                                    <---------LBD16                                                                  <---------ALFIN1                                                                  --------->DEAR3(1)                                                                  --------->AtMYB61                                                                 --------->ZAT2                                                                 <---------ZAT2                                                                ------>NtERF2               ---------                                                               <---------ALFIN1             <--------                                                               --------->DEAR3(1)         <----------                                                            --------->ANAC58      <------NtERF2                                                            ========================HOX2a_HOX2a                                                            --------->ANAC58     <---------RAP2.6(3)                                                            ------>ZmHOX2a(2)    ------>NtERF2                                                           =========================HOX2a_HOX2a                                               ===================HOX2a_HOX2a   --------->RAP2.3(3)                                               ====================HOX2a_HOX2a  --------->RAP2.3(2)                                               ------>ZmHOX2a(1)<---------ATERF1(1)<---------ALFIN1                                          ========================HOX2a_HOX2a   --------->DEAR3(1)     --------->GLK1(1)                    =========================HOX2a_HOX2a  --------->ANAC46     <---------GLK1(1)                   <---------ALFIN1 --------->ARR14(2)    --------->RAP2.6(2) --------->DOF2                        ===========================HOX2a_HOX2a   <---------ATERF1(2) ------>ANAC58                         ------>ZmHOX2a(1)  <---------ARR14(2)    --------->ATERF1(2) ----------->AGL1          --------->ZAT14------>ZmHOX2a(1)<------ZmHOX2a(2) ------>ZmHOX2a(1) ------>ANAC58 --------->ALFIN1        ============================HOX2a_HOX2a --------->RAP2.3(1)  <   aagaaaggtatcccagagtggctcaacagttctctctggtcctcctctcctcccatcgacgatcgccacctccgcaatcctgccgccacttccatcaccc  7970400                                                                      ------>ZmHOX2a(1)                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                                 --------->At4g35610                            <---------DAG2                       <---------ZAT2                            <----------DOF2                --------->ZAT14                     --------->ZAT18                       --------->ABI4(1)             ================================HOX2a_HOX2a   <---------ZAT18             ===================HOX2a_HOX2a               --------->DEAR3(1)             ------>ZmHOX2a(2)                            --------->AtMYB61            <------ZmHOX2a(2)                             <---------ALFIN1            ====================HOX2a_HOX2a        --------->GLK1(1) <---------ALFIN1            =================================HOX2a_HOX2a --------->ANAC46                        ----       ------>ZmHOX2a(1) ------>ZmHOX2a(1)     --------->LBD16   --------->ZAT2                  <--- >AtMYB61  --------->ARR14(2)                  ------>NtERF2     <---------At4g35610    ------>ZmHOX2a(1) -ALFIN1   <---------ARR14(2)                 --------->ANAC46 <---------ALFIN1------>ZmHOX2a(1) ---- -HVH21=============HOX2a_HOX2a              <---------LBD16 ----------->RAV1(1)     ---------->ID1 ---------ALFIN1     <---------ZAT18  ------>ZmHOX2a(1)<---------ALFIN1  ------>ZmHOX2a(1) ------>ZmHOX2a(1)   ctccatctcctccgatcgtcgagcgtcctcctttttcttcctctccctccgcgatttccaccgcaccagctcctcctcttcctgttcgtcctccttccaa  7970500                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                              <------                                                                                         --------->DAG2          --------->ATHB12                                                          --------->HSFC1(1)        <---------TOE2(3)                                                           <---------HSFB2a(2)       <-----------GT1           --------->ICU4                       <-------GAMYB --------->HSFB2a(2)       --------->MYB52(1)      <---------DOF5.7(2)                   <-----------RAV1(1)---------->DOF2 ----->ARR14(2)             ----------->GT1               --------->LBD16           <---------HSFC1(1) ------ARR14(2)            --------->ALFIN1              --------->ANAC46    --------->ARR11(3)  <--- ----->GLK1(2)             <---------ZAT6               <---------LBD16      <---------ARR11(3) <----   atctgagattaacgatttgcagaatgggagtggtaacgatggtgctggaattgaaactcccgcagtttcttctgttgaagatgtttctcgaaaagcgcag  7970600            <---------MYB46(3)            --------->MYB46(2)            --------->MYB52(2)            --------->MYB111(1)          <---------MYB52(1)       <---------TOE2(3)       <---------TOE1(3)    <---------ANAC46 --------bZIP60(2)                                    <---------GLK1(1) --------ANAC58  <---------ANAC58                   --------->ATHB12 --------ANAC58  <---------ANAC58                 <---------WOX13(1) -----RAV1(2)<-------GAMYB ------->TEIL         --------->ATHB12 --------HVH21   <---------ANAC46              <---------YAB1               --------->ARR11(3) -----ZAT2<--------P       -------->P      ------->TEIL     <----------DOF2--------->REM1(1)   <-----   gtcgtggctgaggttagttgcttaaaatcaacctcatgctctatgcattttgattgatttctctttgtgatatacttacatcttgattttttcagttatc  7970700                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                         --------->ANAC46                                                                                       <---------DOF5.7(2)                                                                                    <------MYB46(1)                                                                                    <------MYB83                                                 ----------->RAV1(2)         <---------ANAC46                                                -------->P                  --------->ATHB12        <---------WOX13(1) <------ZmHOX2a(1)--------->ARR11(3)        >>>>>>>>>>>>>>>>>LFY ----HSFB2a(2)           <---------TOE2(3)  <---------ARR11(3)        <------ZmHOX2a(2)--------->MYB52(1)   gaagaaggtgatagacttgaaggaattgaggaagatagcttcacaaggtctacctgatgatgctggaattcgatccattgtttggaaggtaacgccattc  7970800  Previous    Next  AGI:  At4g13730.1    Description:  RabGAP/TBC domain-containing protein. similar to RabGAP/TBC domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G04830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50089.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) Range:  from: 7970270    to: 7974244    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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