Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ANAC58                 --------->ANAC58           ------>ZmHOX2a(1)           --------->LBD16         ----------->RAV1(2)                                                                 --------    <-----------GT1                                                                   --------->GLK1(2) ---------ARR11(3)        <-----------GT1   --------->YAB1    ---------->DOF2<---------MYB46(3)<-----   atgattttacctcctggcaacgcattttatacctgcaagtatacaataatctacagaaattactcaaagtttgagaaattggttagagaatcaaattgtt  7936100                                                                --------->AHL20(2)                                                                --------->YAB1                   --------->GLK1(1)               <---------ATHB12  --------->AHL20(2)                  --------->ARR14(2)         ----------->GT1   <---------ATHB12            ----------                  <---------ARR14(2)       <--------P        --------->WOX13(1)      --------->YAB1               --------->YAB1            <------MYB46(1)   <---------ATHB12          <---------ICU4             --------->ANAC58            <------MYB83    --------->WOX13(1)         <---------ATHB12      --------->WOX13(1)                --------->MYB59<---------ATHB12        --------->ANAC46 --->GT1     --------->ANAC58    <-----------------AG--------->WOX13(1)    <---------AHL20(2) ----YAB1--------->YAB1         --------->ZAT6   --------->WOX13(1)  <---------AHL20(2)--------->DOF5.7(2)   atttgaatcaattacaagcatatatccaaatctaagactaatttggtaagttaatcaatcaatcaatcaaattatatataaacacaatcgttaccacaga  7936200                     --------->DOF5.7(2)                    --------->TOE2(3)                    --------->TOE1(3)                         <---------AHL20(2)                   --------->YAB1                          ----------->GT1                   >>>>>>>>                  <---------ATHB12                  <---------AHL20(2)                    >>>>>>>>>TBF1                --------->WOX13(1)                 --------->AHL20(2)                --------->ANAC58     --------->MYB52(1)                            <---------AHL20(2)                --------->ANAC58 ->RAV1(1)   ------->TEIL                         <---------WOX13(1)                 --------->ANAC46   gaaaactcaacgatgaatcaatcgttaacacagagaaactccttgcgatttgattaatttttagtaaattagagaattgaaactcacacgaagaagaaga  7936300                    --------->ANAC58                    --------->ANAC58                --------->ANAC58                          <-----------GT1                --------->ANAC58                      <---------AHL20(2)            --------->HSFB2a(2)            ------>ZmHOX2a(1)            <---------HSFB2a(2)            <---------At4g35610           <---------LBD16       --------->ANAC46<---------RAP2.6(3)      --------->ARR11(3)       <---------DOF5.7(2)<---------MYB52(1)     <---------GLK1(1)       --------->DOF5.7(2)<---------ANAC46     --------->GLK1(1)--------->YAB1       --------->At4g35610   <----------DOF2       <----------DOF2 >TBF1<---------ARR11(3)    --------->TOE2(3) ------>NtERF2 <-----------GT1   --------->YAB1   agttgagaaatcttggggaagcaagcacaacgtaaacggctcttcctctgccgtttttattttctctctttgttcaaaaatcaaaacttcttttttagtt  7936400                                            <---------MYB52(1)                                            <------NtERF2                                           <---------RAP2.6(3)                                           ------>NtERF2                                           <-----------HVH21                                          --------->DEAR3(1)                                          --------->RAP2.3(2)                                          --------->RAP2.3(3)                                          --------->RRTF1(3)                                       --------->ANAC58                                       --------->ANAC46                                     --------->ARR14(1)                                     --------->CCA1(2)                                    <---------ARR14(2)   ------>NtERF2                                    --------->ARR14(2)   --------->ABI4(1)                                    --------->ARR11(1)   <---------ATERF1(1)                                --------->At4g35610      --------->ORA47(1)                        --------->SPL7 --------->ANAC58  <---------ALFIN1                           -                   <---------At5g28300<-------TEIL      <---------ETT(1)              <---------AHL20(2)                  ------------------>SPL14--------->RAP2.6(2)   <---------ATHB12    <---------CCA1(1)                  <-----------GT1 ----------->ARR10     --------->DEAR3(1)          <---------RVE1(1)         <-------GAMYB<---------SPL7<---------GLK1(2)   --------->DEAR4(1)         <---------ARR11(3)         <---------At4g35610    <---------At4g35610     ----------->HVH21          --------->ARR11(3)         --------->At4g35610  --------->ZAT18    <---------AHL20(2)         ------>ZmHOX2a(1)     <--   ttcaaaacttcagttgcaaatcaccgtacgagtgagcagatacgccgtcattttatcgccgaccccatcactctcttcctcttgagattttttttttttt  7936500                                                                               <---------ATHB12                   --------->ANAC55(1)           <---------ANAC58          ------------>CBF                   <---------ANAC55(2)           <---------ANAC58         --------->CCA1(2)                   --------->ANAC58      --------->ANAC46                 <------ZmHOX2a(2)                   --------->ANAC46   --------->ARR14(2)                 <---------ARR11(3)            *TSS   --------->ANAC58 <----------DOF2                      --------->ARR14(2)       <---------AHL20(1)           <<<<<<<<<<ATML1                      --------->ARR11(3)       <---------AHL20(2)           <<<<<<<<<<PDF2                       <---------ARR14(2)       --------->AHL20(2)--------->YAB1  --------->ANAC58                --------->AGP1      ----------------------->TaNAC69(2) --------->ANAC58         --------->ETT(2) ---------->HVH21  --------->ANAC55(2)<---------ARR14(2)          <----------ARF1                  -- --------DOF2<-----------GT1      <---------ZAT18--------->ALFIN1 <---------ETT(2)    <---------AtLEC2   ctttgacattttattttacacacgtaatcaaatttgtgcatttacgcaaatgtgtgccaactaatttgtagacaagatccaatctatagcatggagataa  7936600                                                      <---------TOE2(3)                                                      <---------TOE1(3)                                               <---------------AGL15                                               --------------->AGL15                              <--                                              <-----------------AGL2      ---------->DOF2     -------            --------->ICU4             --------->TOE2(3)           ---------->DOF2           --------         <---------AHL20(2)           <---------ANAC55(2)     ----------------->AGL1 <---------ZAT2 <---------YAB1                     --------->AHL20(2)--------->MYB59<----------ID1 --------->ANAC58 ------->CCA1(2)        <---------TOE2(3)     <-----------------AGL3 ----------->GT1--------->ANAC58   gttatgagtatttaatgagtattttttatgttatacaattacataaattctatatttaggtttgtccaaaaaagaaaaaagaaggcaagcttagaaaaag  7936700                                                       --------->ANAC46                                                       --------->ANAC58                                                       --------->ANAC58                                            <---------ARR11(3)      --------->ARR14(2)                    --------->AHL20(1)      <---------ARR14(2)                    --------->ARR11(3)                       <---------ZAT6 -------REM1(1)                            --------->AHL20(2)                        ----------->GT1 -->DAG2                               --------->MYB46(3)                        <---------ZAT14 -->DOF2          ---------->DOF2  <-------TEIL <-------TEIL            ----------->HVH21      ------   ttgaagcaaatacacaaactaaaagagaggctacagattcaacaaatatatacatagacgctaagacaagtttgatgacagagtttagagttaaatacaa  7936800                     <---------ARR14(2)                     --------->ARR11(3)                     --------->GLK1(2)                   ----------->ARR10               ----------->GT1         <---------AHL20(2)        --------->AHL20(2)        <---------AHL20(2)                                                                    ------- ----->RAV1(1) --------->At4g35610                                                            <------   catagcaaaattaaataagctaaaatctggtctcgctctctctctctctcttgctaacttcatccaatgctactactaggcataacccatccagcatcat  7936900       ------->GAMYB       --------->AtMYB61                                            --------->LBD16       <---------ALFIN1                                           <---------LBD16      --------->MYB46(3)                                         --------->MYB52(1)     -------->P                                              ----------->HVH21    ------->GAMYB                                          --------->At4g35610   <---------MYB111(2)                                     <---------At4g35610   <---------MYB55(2)                                      <---------ZAT2           <---------HSFB2a(2)   <---------MYB111(1)                                     --------->ZAT2           --------->HSFB2a(2)   --------->MYB46(3)                                      ----------->RAV1(2)   --------->ALFIN1  ------>MYB46(1)                 ------>ZmHOX2a(1)       ------->TEIL       <---------ZAT14  ------>MYB83                --------->ANAC46           <-----------RAV1(2) --------->ZAT14 -->YAB1                    --------->ZAT6              ------->GAMYB       ------>ZmHOX2a(1)    ---- ---ICU4                    <---------ALFIN1           --------->ANAC46--------->GLK1(1)         <---   gaccaacaaccacactatctccatttccaaacactcctcgttgtctcttcttcatcaacgcagctgataccggacttcctacagtgctggaagtcagaga  7937000  Previous    Next  AGI:  At4g13630.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43544.1); contains InterPro domain Protein of unknown function DUF593 (InterPro:IPR007656) Range:  from: 7933904    to: 7936512    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g13640.1    Description:  UNE16 (unfertilized embryo sac 16); transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G24120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43550.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 7936588    to: 7938635    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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