Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <----------DOF2                                                                    <---------ARR11(3)                                                                    --------->ARR11(3)                                                                   <---------GLK1(1)                                                                   --------->GLK1(1)                                                               --------->YAB1                   --------->AHL20(2)                        <XXXXXXXXXXXXXXXXXXXXMIR1886.3--------->ANAC46                 <----------DOF2                         --------->ANAC46                 <---------ZAT14              <---------ARR11(3)                         --------->ANAC55(1)              --------->ZAT14              --------->ARR11(3)                         <---------ANAC55(2)              <---------REM1(2)             <---------GLK1(1)          <-------TEIL     --------->ANAC58            <---------CCA1(2)         <---------HSFB2a(2)       --------->AHL20(2)    ----------->GT1   <---------At4g35610         --------->HSFB2a(2)       <---------AHL20(2)    --------->ANAC58  --------->At4g35610   --------------->AtSPL8   --------->ZAT6               --------->ANAC55(2)    <---------At4g35610   actagttagtactagaaatctttaaatcgaactctaaaaaaattcatttccatatgaacaagtaataagaaatctttagctaagctcatctctacacaat  7903600                                                                <---------HSFC1(1)                                                                --------->HSFC1(1)                                                                --------->HSFB2a(2)                                                        <---------TOE2(2)                                                        <---------TOE1(2)                                                       --------->ALFIN1                                                      --------->TOE1(2)                                                      ------->MYC3                                                      --------->TOE2(2)                                                      <-------MYC3                                                     --------->O2                                                     --------->TGA1a                <----------DOF2                      ==========================================bZIP_DOF                ===============================================bZIP_DOF            <---------ZAT18                 --------->ANAC58    <---------HSFB2a(2) ---------->DOF2         <---------ANAC46        ----------->GT1     <---------O2               --------->ANAC58         <---------ANAC58    <------ZmHOX2a(1)       <---------TGA1a            --------->ANAC58         <---------ANAC58  <---------TOE1(2)--------->ANAC46<XXXXXXXXXXXXXXXXXXXXMIR395A/D/E    ---------->DOF2        <---------TOE2(2)--------->ANAC58<XXXXXXXXXXXXXXXXXXXXMIR395B/C/F   ccatagcaaagtcgtggactttcaagtcgtaggaagagtaacttacaaggaagaaacgtgggttttctcgaactcttcggacaaggcaaagtttcagaca  7903700                             <-------TEIL<-------GAMYB                            --------->CCA1(2)                            ------------>MYB.PH3(1)              --------->GLK1(2)         <---------MYB46(3)                            --------->ARR11(3)            <---------HSFB2a(1)         <-----------RAV1(1)                           <---------ARR11(3)            <---------HSFC1(2)        <---------At4g35610                        <-------TEIL            --------->HSFB2a(1)      <-----------RAV1(1)                      --------->At4g35610            --------->HSFC1(2)     <---------At5g28300                        <---------At4g35610     --------->MYB52(1)    <---------ARR14(2)                               <---------ZAT18      ----    --------->ARR14(2)     --------->ARR11(3)                          <---------ANAC58  <----------DOF2    <---------ARR14(2)     --------->ARR14(2) <---------ANAC46         <---------ANAC58 ------>ZmHOX2a(2)   gagacagaaacgggagtttctgtattgaagatacagttactgctgttgctgtggaattagcattcttgctcaagcttgtgagcttcatgatctttttatt  7903800                 <---------ARR11(3)                 --------->ARR11(3)                 --------->AHL20(2)                 <---------AHL20(1)                 --------->AHL20(1)                --------->CCA1(2)               --------->ARR11(3)               <---------ARR11(3)               <---------ARR14(2)               --------->ARR14(2)      --------->ANAC55(1)      --------->ANAC46                         <---------ANAC58      --------->ANAC55(2)                      <---------ANAC58      --------->ANAC58            <---------ANAC58       ----------->GT1      --------->ANAC58            <---------ANAC46      --------->DAG2                              <     <---------LBD16         <---------ICU4    <---------ANAC46                           <----------    --------->MYB52(1)  <---------ZAT6 <---------At4g35610                   --------->ATHB12 ------- ----->YAB1<---------At4g35610    <---------ANAC58     ---------->DOF2---------->DOF2 <----------DOF2   cagaattcacggaagcagatatattagtgaaacattgcttgagttgatttcgtttgataaagtagaaacccagaaagaaagattgagacttttttccgaa  7903900                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                                  <------MYB83                                                                                  <------MYB46(1)                                                                                  <---------ANAC58                                                                                 <------MYB83                                                         <---------ANAC58      <--------P--------->ZAT6                                                         *TSS                  ======================                                                         <---------ANAC46      <---------MYB52(1)                                              <---------ARR14(2)              <-------GAMYB                                          --------->CCA1(2) <---------GLK1(2) =======================                               <------MYB83  <------ZmHOX2a(1)               <---------MYB46(3)<----- <---------At5g28300           <------MYB46(1)--------->ARR14(2)  =================================== -----------GT1               <---------MYB46(3)         <---------ANAC58   <---------RAP2.6(2)<----- -GT1                         --------->MYB46(2)        <---------LBD16    <---------ZAT18    ------- -->LBD16                     <---------AtMYB61--------->GLK1(1)  <----------DOF2<------MYB46(1)<----   ttttactgcaaatcgaagaagagaagaatggtttggtgatggagataggatttgcaatttcgggttctctttgtctgtgcggttgggtttgactctagat  7904000        <-------GAMYB        <---------ZAT14       --------->ALFIN1    ------->PIF5    <-------MYC4    ------->MYC4    <-------PIF5    ------->MYC2    <-------MYC3    ------->MYC3    <-------MYC2   --------->O2   <---------ANAC55(2)   <---------ANAC46   <---------TGA1a   <---------O2   =============MYC_MYB           --------->ANAC58   <--------ABF1                  --------->ANAC58   --------->TGA1a --------->HSFC1(1) <------------OsbHLH66           --------->RAP2.6(3)                                       <---------AHL20(2) ============MYC_MYB            --------->MYB52(1)                              ----------->GT1 ============MYC_MYB       --------->MYB52(1)                               --------->ARR11(3) <----- -------CBF        <---------HSFB2a(2)                                     <---------bZIP60(1) <----- ============bZIP_DOF    --------->ARR11(3)        --------->ZAT14         --------->bZIP60(1) ------ ----GLK1(2)       --------->HSFB2a(2)     <-----------TBP               --------->YAB1   <---------AHL20(2) -->ATHB12<---------ANAC46 <---------DOF5.7(2)     <---------ZAT14      <---------YAB1 <---------AHL20(2) -----WOX13(1)     <---------HSFC1(1)  <------NtERF2              ---------->DOF2      --------->AHL20(2)   tggccacgtgtgttgtgagttctcgaagataacgaaacggcatcgttttatagtttactgagaagtgagaaagtatgatatcatgttatttttttatttt  7904100                 ----------->GT1        <------NtERF2                                                        <---------WOX13(1)       <---------RAP2.3(1)   ----------->RAV1(1)                          --------->AHL20(1)      <---------DREB2C(2)    <---------ALFIN1                             <---------AHL20(1)      --------->ETT(1)      <---------MYB55(2)                            <---------AHL20(2)      <---------DEAR3(1)    --------->MYB46(3)                         <--------HAHB4      <---------At1g77200  ------>MYB46(1)                             --------->ATHB51      <---------DEAR4(1)   ------>MYB83                               --------->ICU4      <---------RAP2.3(3)--------->AtMYB61                            <---------YAB1     <---------ORA47(1) --------->MYB46(3)                          --------->TOE1(3)            ----   <-----------RAV1(1)<-----------GT1    <---------MYB52(1)         --------->TOE2(3)           ----- ----AHL20(2)    <---------YAB1    <---------ZAT14          ------->TEIL  --------->AHL20(2)    <---- ----AHL20(1)<---------ARR11(3)    --------->ZAT14     <---------AtLEC2<---------ICU4           <---- --->AHL20(2)--------->ARR11(3)  --------->At5g28300 <-----------GT1--------->YAB1     ------->TEIL -   attttttgtcggcgatatcatgttaaaccacccacagtaaaccgttttttgttttttacatgaatgtaaaccataattaattgaaaatgaaactatatat  7904200                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------   --------->TOE2(3)                                                                          <------  <---------YAB1                                                                              <------ --------->ARR11(3)                                                                         --------- <---------ARR11(3)         --------->AHL20(1)                                          --------->YAB1 ----->YAB1------------------------>ANAC81                                          <---------AHL20(2) ---->AHL20(2)              --------->AHL20(2)                             ----------->GT1 --------->YAB1 -----YAB1---------->DOF2   <---------AHL20(2)                           --------->TOE1(2)<---------YAB1 -----AHL20(2)             --------->AHL20(2)                         <-----------GT1  <---------AHL20(2) -------->YAB1      ----------->GT1         ------->TEIL        ----------->GT1    --------->AHL20(2)   aattatcttagagaaagaagaagagaaaaaaaaattgttgaaaatgaattttctgcgatattgcagaagttataacctagtaatattaaataatcatacg  7904300       <----------ID1       ----------->GT1   ---------->DOF2 ---->TOE2(3)                                                                    ------>ZmHOX2a(1) ---->TOE1(3)                                                        --------->AHL20(2) ------>GT1                                                --------->ZAT6       --------->TOE1(3) ----->GT1            <-----------GT1                    <-----------GT1        --------->TOE2(3) ---TOE2(2)           --------->YAB1        <---------TOE2(3)        <---------AHL20(2) ---TOE1(2)     ----------->GT1             <---------TOE1(3)        --------->AHL20(1)          ---- >TOE2(2)  --------->AHL20(2)  ----------->GT1 --------->CCA1(2)    --------->AHL20(2)          -----   ttaaaaaaagagaaaaaatagaaataacaatatcagttaaaagtttaagatttgattttttactctacaaaaaaattgtgttccttaaatgtctatagaa  7904400                                              ---------->DOF2                   <---------AHL20(2)          <---------YAB1               --------->WOX13(1)                 ----------->GT1          <---------AHL20(2)         <---------YAB1                    <------MYB46(1)       ------->TEIL              <---------DAG2        --------->DAG2  <------MYB83               <--   ------->TEIL                  <----------DOF2      ---------->DOF2 --------->MYB111(1)        <--- ----->DAG2   ----------->GT1 <-----------GT1 --------->AHL20(2)      --------->MYB59           <---- ----->DOF2  <---------YAB1--------->YAB1<---------ATHB12             --------->MYB46(2)      -------   aagtgtatgtatattattgtaaataacaaaaatcactttattaatcaataaaacagaaaagttcaaaaacattaggtagtaatttatgtgtgtttcgata  7904500  Previous    Next  AGI:  At4g13590.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G64150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71558.1); contains InterPro domain Protein of unknown function UPF0016; (InterPro:IPR001727) Range:  from: 7901212    to: 7903957    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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