Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------>ZmHOX2a(1)               <---------AHL20(2) -------->TOE2(3)         --------->YAB1 ------->YAB1           <---------TOE2(3) ----->ARR14(2)    ------>MYB83 --------->AHL20(1)                                                <-- -->MYB46(3)       ------>MYB46(1)                                         --------->YAB1    <------- ->ANAC58          --------->MYB52(1)--------->YAB1                       <---------YAB1     <------- ->ANAC58        <---------MYB46(2)  ----------->GT1                    <----------DOF2    <---------ICU4 ->ANAC46        <---------MYB59<---------AHL20(2)           <-----------GT1              --------->ICU4 --GT1        <-----------GT1   --------->AHL20(2)   <----------DOF2 <-----------GT1<-----------GT1   atcctaaatttgattttgacctaactaatgaaaatttaatagtaaaaaactattactttgattttacattttaactttgatagttttttctaatttttat  7864000                                                                                          <---------AHL20(2)              <---------AHL20(2)                                                          --------->AHL20(2)             <---------AHL20(2)                                        ----------->RAV1(1)--------->AHL20(1)          ------>MYB83                                    <---------YAB1             <---------AHL20(2)          ------>MYB46(1)                              <---------AHL20(2) ------->GAMYB  --------->AHL20(2)        <---------MYB59<---------WRKY12             <---------AHL20(2) --------->MYB52(1)<---------AHL20(2) ---------GT1<---------AHL20(1)                   <---------AHL20(2)--------->ANAC46 --------->AHL20(2) --YAB1 --------->TOE2(3)                         <---------YAB1<-----------GT1<---------AHL20(2) --AHL20(2)  --------->AHL20(2)            --------->YAB1 <---------AHL20(2)   --------->AHL20(2)   taactagaaacctaattttttttcgtcaactagaaaactattctatcttgatattattttataattttacagacaacagaattatatataaataatttga  7864100                                                  --------->CCA1(2)      --------->AHL20(2)                 <---------YAB1         <---------AHL20(2) ----------->GT1            <----------DOF2   --------->YAB1     --------->ARR14(2) --------->YAB1        ---------->ID1     --------->YAB1        <---------ARR14(2) --------->AHL20(2)    ------>ZmHOX2a(1)     --------------->AtSPL8--------->WOX13(1)   <------ZmHOX2a(1)--------->YAB1     <---------ICU4<--   gtttttttttgtagcttttaaaattgcattaatcaaatttgtttaatagaggatataaacatggtattaataaaaaaaaattctaaaaattcctctagtt  7864200                             --------->TOE2(3)                             ----------->GT1                           ------->TEIL                      <---------At4g35610                   <---------At4g35610                       --------->At4g35610            --------->ARR14(2)                            <-------TEIL<---------ICU4       <---------At4g35610<---------CCA1(2)             --------->ARR14(2) --------->ANAC58 <-------- <----------DOF2   --------->At4g35610                  <---------GLK1(2)  --------->ANAC46<---------AHL20(2) <---------DAG2 ------>ZmHOX2a(1)                       <---------ARR14(2) --------->ANAC58--------->AHL20(2) -------ALFIN1 --------->TOE2(3)             --------->AHL20(2)    <---------ICU4      ----------->GT1   ccacttttcagccaattcctcaactgatgtatcttaaaaaaaaaaaaaaaaatccacagattcagctaaaaatcactacgaaaaatgaacgattaaaatt  7864300             <------------CBF          ------------>CBF                 ----------->RAV1(1)        --------->REM1(1)               ----------->RAV1(1)        --------->bZIP60(2)          <---------PCF5      ----------->RAV1(1)     ---------->DOF2                        --------->TOE2(3)    *TSS      - -YAB1<---------ALFIN1      --------->ARR11(3)           ---------->DOF2   --------->TOE2(3) --------   aacatgggccacatcaattgggcctaagaagataaagatgggccacaacatttaggcctaaaagaaaatgacctcaacatcaaaacttcgacagtcagtc  7864400                         >>>>>>>>>TBF1                     --------->LBD16                    --------->LBD16                   --------------->AGL15                   --------->HSFB2a(2)                   <---------HSFB2a(2)                                    <---------GLK1(1)                  ----------------->AGL1                            --------->At4g35610               <----------DOF2                                      --------->ZAT2              ------>ZmHOX2a(2)                                     <---------ZAT2             <------ZmHOX2a(2)                                      <---------At4g35610            --------->ARR11(3)                                     ------->TEIL            <---------ARR11(3)                                <---------At4g35610            --------->AGP1                           --------->CCA1(2)   --------->ARR14(2)            <---------AGP1      <----------ID1  ----------->GT1   <-----------RAV1(2) -------->At5g28300<---------------AGL15 --------->CCA1(2) ------>NtERF2 <---------ARR14(2)         < ->WOX13(1)<---------CCA1(2)   ------------------------>ANAC81--------->At4g35610                <---   actgtaacattttagatctttcccgaagaagaaaacgaagaagagacgaagagagaaatgaggccgatgcagctggatatgttatcggagatggatgatg  7864500                                                                                         ------>NtERF2                                                                                        <---------DEAR3(1)                                                                                        --------->DEAR3(1)                                                                                       --------->SPL7                                                                                       <------NtERF2                                                                                       --------->ATERF1(1)                                               --------->ANAC58                       ------>NtERF2                                               --------->ANAC58                       <---------ATERF1(1)                                            --------->ARR14(2)                       ----------->HVH21                                            <---------ARR11(3)                       --------->DEAR3(1)                                            --------->ARR11(3)                       <---------DEAR3(1)                                            <---------ARR14(2)                       --------->At1g77200             xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                 --------->DEAR3(2)  <-------TEIL                            ----------->ARR10            --------->At4g35610 <---------ARR11(3)                    --------->AtLEC2       <---------ANAC58     <---------ATERF1(1) <---------ARR14(2)               --------->ANAC58            <---------ANAC58 --------->ZAT2 --------->ARR14(2)               --------->ANAC46          <------ZmHOX2a(1) --------->ANAC58 ---------GLK1(2)                 --------->ANAC58       <------ZmHOX2a(1)    --------->ANAC58------- --------RAV1(2)  ------->TEIL<---------HSFB2a(2) --------->MYB52(1)   <---------At4g35610<------NtERF2   caggttcttcgatggccatggacgttgatgacctcgaagccatggagatactcaacgaaggaggacttgtctcagataacaagctcgccgacgccgattt  7864600                                                           ------>ZmHOX2a(1)                                                          --------------->AGL15                                                 <---------MYB52(1) <---------GLK1(1)                        ----------->HVH21      ----------->GT1     <---------ARR11(3)                --------->ATHB12               --------->LBD16     --------->ARR11(3)                <---------ICU4               <---------LBD16     <---------TOE1(3)               --------->ICU4              <---------ARR14(2)    <---------TOE2(3)               <---------YAB1              --------->ARR14(2)<----------DOF2        ------>ZmHOX2a(1) -->GLK1(1)  --------->YAB1      --------->GLK1(1)     <-----------GT1             --------->TOE2(3)   cttcaacaaattcgatgatgatttcgatgacaccgatatcaactaaatccggttaagtttcctctttaagatttcagttttttttcctaaacttgatgta  7864700                                     <---------HSFB2a(2)                                     --------->HSFB2a(2)                <-----------GT1                                    <---------LBD16        ----------->GT1 --------------->AGL15                                  --------->ARR11(3)       <---------ANAC55(2)                               <---------ICU4              --------->ANAC55(2)                         ----------->GT1                 <---------ANAC46  <---------------AGL15           --------->TOE2(2)  --------->ICU4    <---------YAB1<-----------GT1--------->ATHB12   atttgtggagaaacctatgtagtaagtgtgtaataagttctgggatttttatgtttgtggtatgtaacaatgtttttcttcatttggattactaaaacat  7864800                                                                                --------->ICU4                                                                           --------->LBD16                                                                          --------->HSFB2a(2)                                                                          <---------HSFB2a(2)                  <----------DOF2                                   <---------TOE1(2)     <---------ANAC46                                             <---------ANAC58     <---------ANAC58      <---------WOX13(1)                     <---------ANAC58 <---------YAB1     <---------ANAC58   <---------YAB1                         <-----------GT1<---------At4g35610   ttgatttgtgtgttattgtgctttgtctgattgttttttttggctcaaatttagaatgttttttttttccttggttctggagatgatgatgttttttgga  7864900  Previous    Next  AGI:  At4g13520.1    Description:  SMAP1 (SMALL ACIDIC PROTEIN 1). similar to unknown [Populus trichocarpa] (GB:ABK95761.1) Range:  from: 7864390    to: 7864920    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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