Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------DAG2                                                                                          <----------DOF2                                                  --------->TOE2(3)                   ------->GAMYB                                                  <----------DOF2                    <---------MYB52(2)                                             <---------ANAC55(2)                     <------------MYB.PH3(2)                                             --------->ANAC55(2)                     --------->MYB46(3)                                            --------->MYB59                        ----------->RAV1(1)                                            --------------->AtSPL8                <----------ID1 ------ARR11(3)     <---------AHL20(2) --------->DAG2    --------->ANAC55(2)    --------->ANAC58 ----->ARR11(3)    --------->AHL20(2) ---------->DOF2    <---------ANAC55(2)  ---------->DOF2 >YAB1   ---------->DOF2        <-----------GT1 ------->TEIL   ----------->HVH21--------->ANAC58   --   atcttgatgagaaaagaactatataatatcaaatttacaataaagttatgtactttaatacatatttgacagattaagaacaaagcaacaaactttttgg  7790900                                                <------MYB46(1)        --------->AtLEC2                                                <------MYB83           <XXXXXXXXXXXXXXXXXXXXMIR861-3P                                               --------->MYB59       <---------ANAC58              --                                 <---------ARR14(2)                  <---------ANAC58           <----                                 --------->ARR14(2)        ------>ZmHOX2a(1)                    -----           <-------TEIL         <------ZmHOX2a(1)      --------->ARR14(2)                     ------- <---------TOE2(3)  <----------DOF2          <---------MYB52(1)     <---------ICU4   <-----------RAV1(1) -------->DOF2      --------->TOE2(3)     <-------TEIL <---------ARR14(2)            ================   ttaaaggaagtgattcatacatctttaacagagaggattccaagtccattaggtccaaatccttcttcaatccttgcagacaaatctatgttgctctcct  7791000     <------ZmHOX2a(1)                                                                          -----   <---------TOE2(3)                                                                       --------->CCA1(2) --------->ICU4              <---------ZAT14                                              --------->ARR11(3) ------->YAB1                --------->ZAT14                                              <---------ARR14(2) -----------AGL15      --------->MYB52(1)                                                 --------->ARR14(2) ->ZmHOX2a(1)       --------->ANAC58                                          --------->At4g35610 ---->RAV1(2)       --------->ANAC58                                 ----------->HVH21   <------ZmHOX2a(1) =====RAV           --------->ANAC46  <----------ID1   <------ZmHOX2a(1)      <---------At4g35610   gtaataaggaagagtttagaagacgaaacagaacacagagaagacaaataagaagaaggacttggctcaatctgaccttgagctctgagtaggatatggt  7791100                                                                                                  <--                                                                                            <------MYB46(1)                                                    <-------GAMYB                           <------MYB83                                                    ==========================================MYC_MYB                                                   --------->MYB52(2)                      --------->MYB46(2)                                                   <---------MYB46(3)                      <---------DEAR3(1)                                                   <------MYB83                           <---------MYB55(1)                                                   <------MYB46(1)                        <--------P                                                 <--------P                              <-------GAMYB                                                 =============================================MYC_MYB                                                ==============================================MYC_MYB                                                <-------GAMYB                            <---------MYB52(1)                              ============================MYC_MYB                       <---------MYB46(3)                              ================================================bZIP_DOF  <---------DEAR3(2)                              ==========================MYC_MYB                        <---------DEAR3(1)                              <---------TGA1a  --------->MYB55(2)                   <---------O2  ---                              --------->TGA1a  <---------MYB46(3)                   --------->TGA1a                              --------->O2    <---------AtMYB61                     --------->O2-----                              <---------O2 --------->ALFIN1        ---------->DOF2  <---------TGA1a                              ==========================MYC_MYB    ===========================bZIP_DOF                     --------->ZAT14      <-------MYC3     --------->At4g35610      =============MYC_MYB                    --------->ALFIN1      ------->MYC3     <---------At4g35610      ================= ------>HVH21 <------ZmHOX2a(1)       <-----------------------TaNAC69(2)            ===============MYC_MYB   gaccgtggaaacagtaggaacggtggagtccgacgagagagacatgtggaggttggttatcagatgagagaaagaatggaaggaagacgtcggtaggcga  7791200                                     <---------ARR11(3)                                    <---------GLK1(1)                              --------->MYB52(1)                          --------->ATERF1(1)                          <------NtERF2                          <---------At4g35610                          --------->At4g35610                         ----------->RAV1(1)                         <---------ATERF1(1)                         <---------RAP2.3(1)                        <---------RAP2.6(2)                        <---------DEAR3(1)                        <---------ATERF1(2)               --------->ANAC58     --------->GLK1(1)                              <---------ANAC58      ---------->DOF2   --------->ATERF1(2)                            --------->AHL20(2)    ----------->HVH21   <---------RAP2.3(2)                            <---------AHL20(2)  --------->LBD16      <---------LBD16                            <---------YAB1*TSS<----------DOF2 < -------ARR14(2)       --------->At4g35610                       <---------AHL20(2)<---------ANAC58 < ------>ARR14(2)   --------->ARR14(2)--------->ARR11(3)   <-----------GT1<---------YAB1            <- ------>ARR10  --------->ANAC58  --------->LBD16   --------->ANAC58   <---------AHL20(2)    <-------- ================bZIP_DOF------>NtERF2             --------->ANAC58<---------AHL20(2)    <-----------GT1   gaaccggtgaaagagaaacgaaatcggcggcagaccggagttcttagaactggaagcaattgactatttttatttattttagtttgctttcttactttac  7791300                                                                                 --------->GLK1(1)                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                                                                                ------->TEIL                                                                          <---------TGA1a                                                                          --------->O2 <---------ZAT2                                                                          <---------O2 --------->ZAT2                                              <---------ICU4              --------->ANAC58                                             --------->AHL20(1)           --------->bZIP60(2)  <-----  <------MYB83                         <---------ATHB12                   --------->TGA1a      ------  <------MYB46(1)                    --------->WOX13(1)                   =========================== --------->MYB46(2)                ------------>CBF         <----------DOF2<-----------HVH21   ------ --------->MYB59              <---------YAB1 <---------AHL20(1)------------>CBF <---------ARR11(1) --------->MYB111(1)          <---------AHL20(2)            ========================bZIP_DOF   ------ --------P    <-----------GT1<---------AHL20(1)      --------->ANAC46     --------->ANAC46   <------- ---------MYB55(1)           --------->YAB1 --------->YAB1--------->At4g35610  <---------ARR14(1) --------MYB52(1)            --------->AHL20(2)  <-----------GT1          --------->ANAC58 <--------- --DOF2  <---------YAB1 ------------>CBF--------->YAB1    <---------At4g35610  <---------CCA1(2)   aggtaggttttatttttaaccaaaaaaacaatattattccaatcaaaaatattacacatcagctttccaatttgccacgtcgtatctccagcttgtcaca  7791400            ----------->GT1           --------->DAG2          ---------->DOF2 ----bZIP60(1) --->bZIP60(1)          <------ZmHOX2a(1)                                                        ---- ====================bZIP_DOF                                                                  <----- --->bZIP60(2)        <---------TOE2(3)                                                      <------- --->O2----------------->AG                                                                  -------- ----GT1--------->HSFB2a(2)                                                                 --------- --HVH21<---------HSFB2a(2)             <-----------GT1                          <---------At4g35610   tcaccattttccaaaagtgaaattaaggagacttcaagagttttacaagagtcttaagtaagtgataagtcttaacaatattctgcttcttcttgtctac  7791500                                <---------YAB1                      --------->TOE2(3)      ---------->DOF2 ------>DOF2          --------->TOE1(3)    <---------YAB1 ----REM1(2)        --------->ARR11(3)   --------->YAB1                                   --------->ZAT14 --ETT(2)           <---------ARR11(3)  <---------YAB1                          <---------At4g35610 ->ETT(2) ------>ZmHOX2a(1)  --------->TOE2(2)                       <----------ID1       <---------ZAT14 ->ARF1  --------->TOE2(3)   --------->TOE1(2) <----------ID1  ------->TEIL     --------->At4g35610   aaagacatcatcctcaaaacaagaccttaaacctatgagtgtatgataaaagacaagagtaaatgaatatagagacgaattgagcttaagagtgaagacc  7791600                                            --------->AHL20(2)                                            --------->ATHB51                                            <---------ICU4                                            <--------ATHB1                                            <---------AHL20(2)                                           --------->ICU4                                           <---------YAB1                                         --------->YAB1                                  <---------MYB52(1)                                        <---------AHL20(2)                          <---------ARR14(2)                                    --------->AHL20(2)                              --------->ARR14(2)                                  --------->ANAC58            --------->LBD16       <---------ARR11(3)                                  ----------->GT1            --------->HSFB2a(2)   --------->GLK1(1)                                  --------->ANAC58           <---------HSFB2a(2)  ---------->TaMYB80                              --------->ANAC46              <---------LBD16   --------->ANAC46                              --------->ANAC58     --------->TOE2(3)<----------DOF2--------->KAN4(1)   --------->TOE2(3)          --------->ANAC58  <-----------GT1 --------->ARR14(2)<---------KAN4(2)   ataaaacttaaactgaattactcaaggtgatcacccaagtaaataataatttacattagtcatccggaaactttatttacagggaatatccattagtccc  7791700                                          <---------ICU4                                          -------->HAHB4     ----------->RAV1(1)                                          <--------ATHB1   <---------ZAT2                  --------->ICU4                                          --------->ATHB12 --------->At4g35610          <---------AHL20(2)             --------->At4g35610          --------->ATHB51 --------->ZAT2               --------->AHL20(2)          --------->ARR14(1)             --------->AHL20(2)<------NtERF2       <---------ICU4<-------        --------->ATHB12          ---------->DOF2         --------->ANAC58     --------->ATHB12------       <---------YAB1       <---------AHL20(2)  ---------->DOF2    ---------->DOF2  <---------TOE2(3)    ------>MYB83       --------->ARR11(3)--------->ICU4   --------->ANAC58    <---------ATHB12<------    ------>MYB46(1)    <---------ARR11(3)<---------AHL20(2)<---------At4g35610<---------YAB1---------    -------->P        --------->YAB1     <---------ATHB51 <---------ATERF1(1) --------->ICU4<--------   taaacctacatgattcgctgagaatgatattaaaaccaaagaaataattgaaaagaaggccagcaccagtaaagaaacccatgattaagtttaattatca  7791800  Previous    Next  AGI:  At4g13400.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G63290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65570.1); contains domain Clavaminate synthase-like (SSF51197); contains domain no description (G3DSA:2.60.120.330) Range:  from: 7787818    to: 7791280    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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