Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                    <---------AHL20(2)            --------->ZAT14      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)     <---------GLK1(2)     --------->ARR14(3)     <---------ARR14(3)     <---------ARR11(3)                                           <---------AHL20(2)     --------->ARR11(3)   <----------DOF2<---------bZIP60(1)      --------->AHL20(2) -----AHL20(2)     --------->AHL20(2)    --------->bZIP60(1) <-------TEIL              <-----------GT1 -----YAB1  --------->ZAT18          <---------TOE2(3)    <---------MYB46(3)      <----------DOF2 ->AHL20(1) <---------ZAT18         --------->YAB1     <---------ANAC58           <---------DAG2 ---- --AHL20(1) <---------ZAT14       <---------WOX13(1)   <---------ANAC58        <-----------GT1  <----   tattcaagattttgtgcactatttaatactttggagattgatgatgtgattttgtattcgtggttcatataattttagtttttactttttcaccgattat  7774700                                   ------>ZmHOX2a(1)                                  --------->TOE2(3)                                  --------->TOE1(3)                               --------->GLK1(2)                               --------->ARR14(2)                               <---------ARR14(2)                               <---------ARR11(1)                   <---------YAB1                              <---------ARR14(1)                ----------->GT1                        --------->CCA1(2)            --------->ARR11(3)                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   ---------->DOF2 ----->YAB1            <---------ARR14(2)            --------->AHL20(1)                    --------->MYB52(2) -----YAB1             --------->ARR14(2)            <---------AHL20(1)         --------->LBD16     -   gaaaattttaaaccaaaaactcacatatatgcgaatccttatctagttagacatatatattgtctaaagtaatattgtaaaccgcatatgtgttaattgc  7774800                                              --------->YAB1                                             <---------YAB1                                 ---------                                             --------->ICU4                                <---------AHL20(2)                                            --------->AHL20(2)                   --------->ZAT6                                            <---------AHL20(2)                   <-----------GT1                                            <---------AHL20(1)                 <-----------GT1                            <---------MYB46(3)<---------ICU4                <---------ARR14(2)                <------ZmHOX2a(1)          --------->YAB1                   --------->ARR14(2)              --------->ANAC58            <---------YAB1                    <---------ARR11(3)              --------->ANAC58       <------MYB83                           <---------GLK1(2)   -----      <---------YAB1 --------->ANAC46<---------MYB46(3)                    <------ZmHOX2a(1)<--------   <---------YAB1    --------->ANAC58<------MYB46(1)                    <---------LBD16    --------->AHL20(2) <---------AHL20(2)  --------->ANAC58----------->GT1                <---------AHL20(2)  <---------AHL20(2) -------->AHL20(2)<---------KAN4(2)<---------WOX13(1)              --------->AHL20(2)  --------->AHL20(2)   gatttaatattgttgtaaggaataagccatttgttagattggttattataattagtttccaattggctattaattcaggattttcactattaaataaatc  7774900                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                                                                 --------->AHL20(1)                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                                                --------->AHL20(2)                                                                <---------AHL20(2)     <---------ARR11(3)                                       --------->YAB1                 ------->GAMYB     --------->ARR11(3)                                     --------->AHL20(2)              --------- >AHL20(2)             <---------YAB1                      --------->YAB1      --------->AHL20(2) ---->YAB1      --------->AHL20(2)                        --------->AHL20(2)--------->WOX13(1) -AHL20(2)      <---------AHL20(2)                  <-----------HVH21<---------AHL20(2)   --------->MYB52(1)   atcttaaaatcttcttattttaatgctgattttcgaacatgttttttttttttctgtcaaataaaaataatttaaaatcaattacatggactcaaccgct  7775000                                   <----------DOF2                            --------->DAG2                           ---------->DOF2                         --------->MYB46(3)                       ----------->RAV1(1)                    --------->ANAC58         ---------->DOF2    ---------->DOF2                   <--                    --------->ANAC58 <-----------GT1        --------->At4g35610                  <---         ------->TEIL <----------ID1 --------->MYB52(1)     <---------At4g35610 -------->P     <----- >MYB46(3)       ---------->DOF2   <---------DAG2       ----------->HVH21  <-----------GT1    -------   cgaatcaaatggaccgagacaaaggcaacaaaagtgactttacggtctaaagaaacctctgaagcagaaagagtgtttcacttaccatctctatctccgt  7775100          ------->TEIL          <---------ARR14(2)     --------->YAB1          --------->ARR14(2)     <---------ICU4         <---------CCA1(2)      <---------YAB1   <---------YAB1             --------->YAB1                                                        < --------->At4g35610          <---------ICU4                         --------->ARR14(2)             < <---------At4g35610         <---------YAB1                          <---------GLK1(2)              < -------At4g35610          --------->YAB1                            <---------ARR14(2)             - ------DEAR3(1)           <---------YAB1  <----------DOF2        --------->LBD16                    < ------HVH21            *TSS<---------ARR11(3)            <----------DOF2       --------->HSFB2a(1) - -->ANAC46<---------ARR11(3)--------->ARR11(3)---------->ID1  XXXXXXXXXXXXXXXXXXXX>MIR865-3P       --   cgctgatgactgtatcttcttcaccactatgatcatcatcaaaactttgtctcatcgcatctttttccccaaattctcacaaaccttctcttctcaattc  7775200                                                             <------NtERF2                                                           <---------ANAC58                                                           <---------ANAC46            --------->GLK1(2)                              <---------ANAC58           --------->ARR14(2)                             <------NtERF2           <---------GLK1(2)                           --------->ATERF1(1)           <---------ARR14(2)                         <---------ZAT2         ----------->ARR10                            --------->ZAT2  ------>MYB46(1)                                     <---------At4g35610  ------>MYB83                                        --------->At4g35610 ---------MYB55(2)                                   <---------ARR14(2)      <---------TOE2(3) ---------MYB111(2)                                  --------->ARR14(2)    ---------->DOF2 ---------MYB111(1)               --------->GLK1(1) <------NtERF2          <---------DOF5.7(2)      < -------->MYB46(3)         ------>ZmHOX2a(2)       --------->LBD16       --------->DOF5.7(2)      <-- ---------MYB46(2)        <------ZmHOX2a(2)        <------NtERF2        --------->TOE1(3)         <-- -------->AtMYB61        --------->ARR14(2)       <---------DEAR3(1)    --------->TOE2(3) ----------- ------->ANAC46          <---------ARR14(2)      <---------LBD16  --------->ATHB12      <-----------GT1   caccaaaccctcagattctcaatctccgatcgtcggaaattctcagcgatggccggagctggcgtcgatgatttcgttaaaggaaatgtttttccgaatg  7775300                                                  --------->ANAC55(2)                                      ------->GAMYB ----------->HVH21                   ----------->GT1                                     --------->ANAC46                                  --------->DAG2       --------->YAB1                --------->ANAC58                                 ---------->DOF2 ------NtERF2                        --------->ANAC58     <----------DOF2    <---------TOE1(2) -------REM1(1)           ---------->DOF2         <---------At4g35610     <---------ANAC46        <-- ---------RAV1(1)        --------->AtMYB61       <---------TOE2(3)        <---------ANAC58       <--- ------>AGL1            --------->MYB46(3)   ------->TEIL<---------DAG2   <---------ANAC58     ------   gtgtcgctctcatcactctcgatcgaaccaaagctctcaacgccatgaatttaggtgacccttttgaatttttgtttcttgggtttgataaagtaagaac  7775400                                                                                                    <                                                                                                    -                                                                           <---------ANAC58    ------                                                                           <---------ANAC58   <------                                                                        <---------WOX13(1)  ---------                                                                      -------->HAHB4       --------->ICU4                                                                      --------->ATHB12     <---------YAB1                                 ---------->DOF2                      <---------ICU4     --------->YAB1    <---------ZAT6         <---------AHL20(2)                        --------->ICU4     <---------YAB1 --------DOF2              --------->AHL20(2)                        <---------YAB1     --------->AHL20(2) ------DAG2          <---------ARR11(3)                              <---------ATHB12   <---------AHL20(2) ->TEIL<---------ZAT14 <---------ICU4        <----------DOF2     --------->MYB46(3)   --------->CCA1(2)   cttttagtgtttactgaattcaaaatcatttttttaaaaggaattggctttgaaatagttggatgtaacaaatgattgctaggctcagatataattataa  7775500                                ----------->GT1                         ----------->GT1                    --------->ARR14(2)                               --------->LBD16       --------->YAB1         ---------->DOF2                <---------At4g35610       <---------ICU4--------->CCA1(2)                      --------->ARR14(2)   <-------TEIL     <---------ARR14(2)                      <---------ARR14(2) ---------HSFC1(2)  --------->ARR11(3)        <---------ANAC58     ------>ZmHOX2a(2) -------->HSFC1(2)<XXXXXXXXXXXXXXXXXXXXMIR2112-3P  <---------YAB1--------->ARR14(2) --->YAB1 --------->YAB1   --------->CCA1(2)  <---------ANAC58   <---------ARR14(2) ---YAB1 <---------YAB1 ----------->GT1    <----------DOF2  --------->GLK1(2)         <---------TOE2(3) >YAB1--------->ICU4--------->ARR11(1)---------->DOF2      <---------GLK1(1)          <---------YAB1   gaagcttcattatgatgttacagatatggatataaagtataaaagctttcttgatgaatgggaatctgatccgagagtgaaatgtgttatcgttgaagga  7775600  Previous    Next  AGI:  At4g13360.1    Description:  catalytic. similar to enoyl-CoA hydratase/isomerase family protein [Arabidopsis thaliana] (TAIR:AT3G24360.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96659.1); contains InterPro domain Crotonase, core; (InterPro:IPR001753) Range:  from: 7775124    to: 7777891    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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