Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------YAB1                  ----------->RAV1(1)--------->ATHB12                                         <------               --------->ANAC46   --------->CCA1(2)                                 --------->AHL20(2)   --------->CCA1(2)             <---------ARR11(3)                             --------------->AGL15 -ANAC58       --------->ANAC58  --------->ARR11(1)             <----------DOF2 <---------HSFB2a(2) -ANAC58       --------->ANAC58  --------->ARR11(3)         ------>ZmHOX2a(2)   --------->HSFB2a(2) <   atgagatttggatttgaacgcaacattctacataagatatgatttgccacaactaattttgatccgattttttgaaagttttctaaaaatataactatga  7764700                                                                                      <---------ANAC58                                      --------->TOE2(3)                               <---------ANAC58                                     <---------ICU4                         --------->ATHB12                                     --------->ATHB12                       <---------ICU4                                     <--------HAHB4      <---------TOE2(3)  --------->YAB1                                    <---------YAB1     <---------AHL20(2)  <---------YAB1 <---------TOE2(3)         <---------TOE2(3)      <----------DOF2       --------->AHL20(2) ---YAB1 ------>ZmHOX2a(1)---------->DOF2     --------->KAN4(2) ----------->GT1     <-----------GT1 -----------GT1    <---------AHL20(2)--------->YAB1   <---------AHL20(2)<---------AHL20(2)---------->DOF2   tttaacatttcctgtttatattttatattaaagtttttatcattagtttattcttttttaatgttttggttaaatttatcattgttttacttgaaagttg  7764800                                         --------->ANAC58                                         --------->ANAC58            <------NtERF2                                         ----------->GT1            ------>NtERF2                                       ---------->DOF2       --------->ARR14(2)                                     <------NtERF2           ------->TEIL                                    ------>NtERF2            <---------ARR14(2)                                    --------->LBD16    --------->TOE1(2)                          <--                                   <---------ANAC46    --------->TOE2(2)                          ---                                  <---------LBD16     --------->YAB1----------->RAV1(1)          <---       <---------ANAC46          ------->GAMYB       <---------YAB1<---------ETT(2)           -------       <---------ANAC58       --------->MYB52(1)   --------->YAB1  <----------ID1----------->GT1 ----       <---------ANAC58    --------->TOE2(3)    --------->YAB1     --------->ETT(2)   <---------ANAC46   gaaactatagcgtcgaatggagacagaaaacttaacggcgggaaagcaaaaaataatcatacgaatttggcgacaaaacaagattgtaacttgtaagaat  7764900                                                                             <---------ARR14(2)                                                                             --------->KAN4(2)                                                                             --------->ARR14(2)                                                                            --------->KAN4(1)                                                                            <---------KAN4(1)                                                                     --------->ATHB51                                                                     --------->ATHB12      <---------DAG2                                                <---------YAB1      <----------DOF2                                               --------->ICU4               ----   <-----------GT1                                               <---------YAB1                 -----  --------->AHL20(2)                                           ------>ZmHOX2a(2)            <------ZmHOX2a(1) -------AHL20(2)                                               ====================================HOX2a_HOX2a ------>AHL20(2)                            ----------->GT1  <---------ARR11(3)     <---------------AGL15 ------AHL20(2)   <----------ID1      ---------->DOF2        --------->ARR11(3)    <-----------------AG -->YAB1     --------->YAB1     ----------->GT1         --------->ICU4<------------CBF    --------->MYB59 ----->AHL20(2) ---------->DOF2----------->GT1        ---------->DOF2<---------ICU4<-----------------AGL1   aaaattaactttttatcaaaaagacaaaataaactgttaaaaaaggaagaaaaatggaaagatgatcttcattattgaatattctcacaaattaggaaac  7765000                                                           ----------->RAV1(1)                                                        --------->ANAC58                                                 --------->ANAC58        ---------->DOF2                      --------->ANAC58        <---------AHL20(2)       --------->AHL20(2)               --------->ZAT6  --------->ANAC46   --------->AHL20(2)                   --------->ANAC46--------->ANAC58  <---------AHL20(2)                  <-----------GT1 --------->AtLEC2---------->DOF2  --------->AHL20(2)         <-----------GT1 --------->ANAC58        *TSS     ---------->DOF2 ----->TOE2(3)         --------->AHL20(2) --------->ANAC46--------->ANAC46---------->DOF2 ---->YAB1     ----------->GT1------------>CBF   --------->ANAC58  ----------->TBP       ---------->DOF2   ataaataaataaaagagaagaaaaaaaaaattcacaatttatacactacgcatgccatacacaacacatatataaagaaagaaagtgttttaaaagagag  7765100                     --------->TOE1(3)                     --------->TOE2(3)             ----------->RAV1(1)            <----------ID1 --------->ICU4                        ------>ZmHOX2a(2)               <---     --------->At4g35610   <---------ATHB12<<<<<<<<<TBF1     ----------->HVH21      --------->YAB1  - XXXXXXXXXXXXXXXXXXXX>MIR390A/B         <<<<<<<<<TBF1 <-----------GT1      <---------GLK1(1)    -----   caaactcagaagaaacaacaaaacctgaaatcattcattttcttcttcttcacaattttctctctgatcgtttttgggtttctcatttataagtaaaacc  7765200                                 <------ZmHOX2a(2)                                --------->ARR14(2)                                --------->ARR11(3)                            <------ZmHOX2a(2)                            --------->CCA1(2)                            --------->ARR14(1)                           --------->ARR14(2)                                                     <--                           <---------ARR11(3)     --------->ANAC46                         <---------                           <---------ARR14(2)     --------->ANAC58                        <---------DAG2   --------->YAB1          --------->AGP1<----------DOF2                           <---------ANAC58 ------------AGL15--------->ANAC46------>ZmHOX2a(2)                            <----------DOF2<------ -------->YAB1  <-----------GT1 <---------ARR14(2)----------->RAV1(1)      <---------CCA1(2)  <------ ---->TOE2(3) <-----------GT1------>ZmHOX2a(2)    --------->ANAC58<---------GLK1(2)<---------ANAC58 -   tctaataagaaacatttttcacatcaccagatccgatcttgagcttttgcaccagcaaaaaaaaaacaggttctcttctatctttgcttctacctttctt  7765300           <------MYB46(1)           <------MYB83       --------->ARR14(2)       <---------GLK1(2)    --------->YAB1     ------->MYC3                --------->YAB1   <-----------------AGL1                         <---------YAB1   <-----------------AG<-------MYC3             <---------ICU4 --------->WOX13(1)  ------->TEIL               --------->YAB1 -------ARR11(3)   <-------TEIL              <---------ICU4                                      ---- -DOF2 <---------ARR14(2)                    --------->YAB1   --------->ARR11(3)                ----- ---ANAC58 ----------->GT1                --------->YAB1      <---------ARR11(3)    <---------ANAC58 ---ANAC58--------->MYB59--------------->AtSPL8--------->ICU4 --------->GLK1(2)     <---------ANAC58 ----->ZmHOX2a(2) --------->AtLEC2    ----------->GT1        <---------GLK1(2)      <---------ANAC46-   gatctatcagatttggtaacatgcatgtgagtactactacttgttaataataatcatacataagaatctttcgattcacaaatgtttcttgggaaaataa  7765400                                             --------->ZAT6     <---------ARR14(2)           --------->HSFC1(1)                          --------->AHL20(2)     --------->ARR14(2)           --------->HSFB2a(2)                      ----------->GT1 ----->DAG2                       <---------HSFB2a(2)                      --------->TOE2(3)     ---- ----->DOF2                      <---------LBD16                          ----------->GT1       <---- -------->ALFIN1             <---------MYB52(1)             --------->AtLEC2  <---------AHL20(2)-----   aagtggggattcgagttttgtattttcatccgttttctggaatccaaacactaaatttcttcttgcaaaccccaaaatgttaaattagtttttcaaaaga  7765500            <---------PCF2                                                                      -----            <---------PCF5                                                                      -----      <------NtERF2                                              <---------At4g35610            <---- <---------TOE2(3)                     <----------DOF2      <----------DOF2          ----------->RAV1(1) ----->CCA1(2)               <---------DAG2                <---------ANAC58    <---------DAG2   ----- -----ARR11(3)               <----------DOF2<-----------GT1<---------ANAC58    <----------DOF2  ----- ---->ARR11(1)    <---------ATHB12 <----------DOF2     <----------DOF2    <---------MYB59       -----   tttgaggcagagagggaccagtcaatactcacttttcctttctttttttctcactgtctttgctttctgctaattatctaacttttccaacagattagac  7765600  Previous    Next  AGI:  At4g13345.1    Description:  MEE55 (maternal effect embryo arrest 55). similar to TMS membrane family protein / tumour differentially expressed (TDE) family protein [Arabidopsis thaliana] (TAIR:AT3G24460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65555.1); contains InterPro domain TMS membrane protein/tumour differentially expressed protein; (InterPro:IPR005016) Range:  from: 7765069    to: 7769684    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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