Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  ---------->DOF2                                                            --------------->AGL15                                                            <----------DOF2                                                         <---------AHL20(2)                                                      <---------ICU4                                                      --------->AHL20(1)                                                      <---------AHL20(1)                                                      --------->ARR11(3)                     <-------                                                   --------->AHL20(2)                     <------MYB83                                                   --------->YAB1                         <---------MYB46(3)        <---------ATHB12                          <---------ATHB12                        <------MYB46(1)     <-----------GT1                              <---------ATHB51                       <---------AtMYB61 ------TEIL                             <-------TEIL  <---------ARR11(3)              <-----------RAV1(1)   attcatttcactcattcagacaaattttgagaaaattagaaatacattggcaataatattttctttaaaagttatttctgcgaaaattttgttggtggat  7679700                                                                                                 ----                                                                                                 ----                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------             --------->YAB1                                                                 <--------           ------>MYB46(1)                                                                 --------->MYB52(1)           ------>MYB83                                                                <-------------         <---------MYB46(2)                                                           ------>NtERF2         <---------MYB59                                                             --------->LBD16         <---------MYB111(1)                                                        --------->LBD16       ------->TEIL                                                                 <---------LBD16   --------->YAB1           <---------YAB1        <---------YAB1                   <---------LBD16 --MYB46(3)--------->MYB52(1)             <----------DOF2                <-----------GT1 <----------DOF2   aactataagaacctaacatagttttgttttatgaatggcctagtctttgtttattgttgaaatagttgccaagtttatcgtctctcccgggctttacgga  7679800     --------->MYB46(3)   --------->ANAC58   --------->ANAC58   --------->ANAC46 ----->ANAC58 ----->ANAC58 ->HSFB2a(2) --HSFB2a(2) ->ANAC58                                                                     <-----------------AG ->ANAC46                                                                     <-----------------AGL1 ->ANAC55(2)                                                                 <-----------GT1 ->ANAC58        --------->TOE2(3)                    <---------TOE1(3)    <---------WOX13(1) --ANAC55(2)  <<<<<<<<<GT-1     ----------->GT1       <---------TOE2(3)  --------->ATHB12 -LBD16  <---------ATHB12   ---------->DOF2     --------->AHL20(2)    <------------CBF -----SPL14   <-----------GT1   <----------ID1--------->TOE2(3)  <---------CCA1(2)   agcacaaaccactgatttacctttgaacaccaaagagaaaaaaaaaaaacttaaataaggtttctgcctatctattgatttactattttggtatagaaca  7679900                                                                  --------->ATHB12                                                          ------->MYC3                                                          <-------MYC3                                                         --------->O2                                              <---------ANAC58 <---------ANAC58                                              <---------ANAC46 --------->TOE2(3) <---------TOE2(3)                                              <---------ANAC58 <---------ANAC58  <---------TOE1(3)                                 --------->HSFC1(2)      <---------TGA1a       <---------ICU4                  ----------->HVH21   --------->TOE2(3)  --------->TGA1a    <---------ICU4         ------>ZmHOX2a(1)       --------->HSFB2a(1)     <---------O2       --------->ATHB51        --------->TOE1(3)      <---------GLK1(2)        <---------TOE1(2)   <--------HAHB4        --------->TOE2(3)   --------->HSFB2a(2)        <---------ALFIN1    <---------YAB1     --------->ARR14(2) <----------DOF2------>ZmHOX2a(1)<---------TOE2(2)--------->YAB1          ----     <---------ARR14(2) ===========================================bZIP_DOF--------->ICU4--------->LBD16   aatttcaaatccttaaatctgtgacactttctcgattcttcctcattttcgtgcatcccacgtttccttgatttgtcataattaaggcttccacagattt  7680000                                                               --------->AHL20(2)                                                         >>>>>>>>>SPL1                                                         ------------>CBF                                                         >>>>>>>>>SPL4                                                       --------->LBD16                                                       <---------SPL7                                                     --------------->AtSPL8                                              <---------YAB1   <---------AHL20(2)                          --------->GLK1(2) <----------DOF2   --------->AHL20(2)                      --------->YAB1     <-----------GT1 >>>>>>>>>SPL5                       --------                     <---------YAB1      <---------AHL20(2)   <---------AHL20(2)           ----------              <---------ANAC58     ------------>CBF<-----------GT1                        <---------AHL20(2) ------->GT1  <---------ANAC58  <---------ETT(2)<---------GLK1(2)<---------GLK1(2)   <---------KAN4(2)   agaaaaatttgtagttgcatactataataatctgtcgaacaatttactttgattctccgtacaattaaattctctctcgttcttgggaatattaaaagta  7680100                                                                          --------->YAB1                                                                          <---------ICU4                                                                        --------->ANAC58                                                                     <---------KAN4(2)                                                                   <------ZmHOX2a(1)                                                               <---------TOE1(1)               <----- --->GT1                                                  <---------TOE1(2)         <-------TEIL >DOF2  <-----------TBP   ---------->DOF2              --------->ATHB12 --------->ANAC58     --------   aaaagtttgtatttgtagagaagaaaacaaaagaaaggttttggtaccatggttccatcgttggaacgaggaataagcatcacgagttcattcaatcttg  7680200                       ---------->DOF2                   --------->LBD16                  <---------LBD16                                <------NtERF2                 <---------LBD16                   <---------ARR14(2)               <---------ALFIN1        --------->TOE2(3)       <---------ANAC46              ------>ZmHOX2a(1)      -------->P<---------LBD16<---------LBD16                       <    --------->ATHB12--------->LBD16 ------->GAMYB--------->LBD16--------->LBD16--------->ANAC58     - ----YAB1     ----------->HVH21    <---------MYB111(2)  -------->P  ----------->GT1     <---------DEAR3(1) ->YAB1     ----------------->AGL1 --------->MYB46(3) --------->MYB46(3)       --------->ANAC58     <   atagaatgtttgattcctcaccgggaaaagaacaacaacaacctcatctcgcggaaacaaccatgccggagagtcaaactcaagacagcctcggtggaag  7680300               <------NtERF2                                     <---------MYB52(1)              ------>NtERF2                                     ----------->GT1              <---------ATERF1(1)                    --------->ANAC58   <---------TOE2(3)             <---------ATERF1(2)                 <------ZmHOX2a(1) <---------MYB46(3)             --------->DEAR3(1)            <---------ETT(2)     --------->LBD16             --------->RAP2.6(2)           --------->ETT(2)   <---------LBD16   --------->REM1(2)                     --------->LBD16    <---------ARR14(2)            <----------  --------->ALFIN1                     --------->HSFB2a(2)  --------->GLK1(2)          --------->ATHB51 --------->LBD16  <---------At4g35610  <---------HSFB2a(2)--------->MYB46(3)           <---------ICU4 ---------ANAC46  --------->At4g35610  <---------LBD16  ----------->RAV1(1)           <---------YAB1 -------->O2--------->DEAR3(2)     --------->GLK1(1) --------->ANAC58  ---------->DOF2--------->ICU4 ---------O2--------->MYB46(3)     <---------GLK1(1) --------->ANAC46<---------YAB1<-------TEIL<-----   tcccgtggagactagccgcccgatgacttctcgtctgatttcccgtagacaggacaagcaacaatccggtgattaaagaagaagtttcattatttctgtt  7680400                                                                                                    <                                                                                              -------                                                           <---------ICU4                     -------                       --------->CCA1(2)          --------->LBD16                          <-------TEIL                      <---------ARR11(3)         <---------ANAC46                        <---------GLK1(2)            <---------ARR11(3)    --------->DAG2 <---------ANAC58              <---------YAB1 ------- -GT1       --------->ARR11(3)   ---------->DOF2 <---------ANAC58           --------->ICU4--------->CCA1(2) ----MYB52(1)         --------->ARR11(3)        <---------LBD16           <---------At4g35610 -------   cgtttaagaactaagaactctagagatatatatcaaaaagcttacaattttgcgggtttaaacattgtagagacggagatgatgaaagatagattcacga  7680500                          <---------MYB46(3)                                        --------->At5g28300                      <---------MYB46(3)                                           --------->LBD16                      <-----------RAV1(1)                                          ----------->GT1                --------->CCA1(2)       ------->TEIL                       --------->ARR14(2)               <---------ARR11(3)       --------->ARR11(3)                 <---------ARR14(2)         --------->HSFB2a(2)            <---------ARR11(3)                 <-----------ARR10         <---------HSFB2a(2) <---------MYB46(3)                            --------->GLK1(2)   <---------------AGL15 --------->ALFIN1                                  ------->TEIL   --------------->AGL15 <---------AtMYB61                              <---------ANAC55(2) -----------GT1--------->ARR14(2)       --------->ARR14(2)              --------->ANAC55(2)         - -->ANAC46     <---------ARR14(2)       <---------ARR14(2)              --------->ANAC58        ----- -->ANAC58     --------->ARR11(3)      <---------CCA1(2)                --------->ANAC58   ---------- -->ANAC55(2)  --------->ARR11(1)    --------->ALFIN1              --------->bZIP60(1)    --------->DAG2 -->ANAC58   ----------->ARR10  ---------->DOF2  <----------DOF2   <---------bZIP60(1)   ---------->DOF2   aattacttcttggagaagatatgtctggtggtggtaaaggtgtatcttctgctttggcactatcaaatgccatcacgaatctagccggtaaaaaagtaac  7680600  Previous    Next  AGI:  At4g13240.1    Description:  ATROPGEF9/ROPGEF9 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/. similar to ATROPGEF8/ROPGEF8 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor/ [Arabidopsis thaliana] (TAIR:AT3G24620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65507.1); contains InterPro domain Protein of unknown function DUF315, plant (InterPro:IPR005512) Range:  from: 7680149    to: 7682618    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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