Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <------MYB83                                                                       <------MYB46(1)                                                                   --------->ATHB12                                                           <---------TOE1(2)                                                       --------->ZAT18 <---------MYB46(3)          <---------------AGL15                        ----------->HVH21          --------------->AGL15   --------->ZAT14    <---------At4g35610      <---------At4g35610 ---------YAB1             --------->ATHB12          --------->At4g35610      --------->ZAT2 -------ICU4              <---------YAB1      ---------->DOF2  <-------TEIL   <---------ZAT2<-------- ------>YAB1          <---------ZAT6      XXXXXXXXXXXXXXXXXXXX>MIR319A/B      --------->At4g35610   <   gtatgactaaaaccatttagagtagagtttgattagtgaagacaagactaaagagagctcacaggtacaagattggttccagcttcaattccatctttcc  7674900                                                     --------->ZAT14                                                 <-----------GT1                                                <---------YAB1                                              <---------ICU4                                <--------       --------->ANAC46                      --------->ICU4                           ----------->HVH21       --------->ANAC58                      <---------YAB1            <---------ARR11(3)  <---------DAG2      <---------LBD16                       --------->TOE2(3)    ----------->RAV1(1)  <---------ATHB12 --DOF2--------->ANAC58                    <---------ICU4   <-------GAMYB         <---------ATHB12 ---------KAN4(1)                          --------->YAB1  <-----------RAV1(1)  --------->WOX13(1)   caatattccacgcagttctaagaactgttcaacaaaatcacacaaacattattactaaactctgttgcaacaatttcttcatcaatcaatgacccttttg  7675000                                                                       --------->ZAT2                                                                       --------->At4g35610                                                                       <---------At4g35610                                                                --------->ZAT14                                                                --------->ZAT18                                 --------->ALFIN1           --------->GLK1(2)                             ---------->DOF2  --------->MYB46(3)<---------ZAT14                         <----------ID1    <----------ID1--------->ANAC46   --------->AHL20(2) ---------->DOF2   ---------->DOF2  --------->ANAC58 --DOF2             --------->YAB1   ----------->GT1     --------->ANAC58   ctcaatttcatagacatagctatcaaaagaacaaagtgagggtaaagaacaaacctttcaagaaactggactgagcagacaaaacaagggttttggaccg  7675100                                                  <---------ANAC58                 <------ZmHOX2a(1)                <---------ANAC46               --------->ALFIN1                   <---------ANAC58        <-------GAMYB                            <-------TEIL       <---------MYB46(3)                    --------->ICU4                                     <----      <---------TOE2(3)                    ---------->DOF2                              ----------->GT1      <---------AtMYB61                 <---------ANAC46  <-----------GT1           <------ZmHOX2a(1)   aagtcgttgtggttgaagaggagcaattcgagttctcaagttgagtaaagatgcgttttttaacttcaaaacagagcatggagagaggaatggagaattg  7675200                                                                             <---------WOX13(1)                                                                           --------->ATHB12                      --------->GLK1(2)                       --------->ANAC58                  <----          <---------TOE1(3)                          --------->CCA1(2)    <---------YAB1      <------          <---------TOE2(3)          <---------------------WRI1         --------->ANAC55(2) ---------       <<<<<<<<<MYB98 --------->ARR11(3)        ---------->DOF2    ----------->HVH21      <----------DOF2 -----LBD16          <---------GLK1(2)     <------ZmHOX2a(1)  --------->ANAC58    ---------->DOF2   gggaattgggttagggtttgtaagaatcttggagcgagaggcgaaggattcaaagatagagaagaagccatgacatgtgattgctaaagccgcttgattt  7675300                   ---------->DOF2       --------->GLK1(2)                                      <------------CBF      <---------ARR14(2)                                 <------------CBF      <---------GLK1(2)      <------------CBF    --------->ARR11(3) <---------At4g35610      --------->ARR14(2)    --------->DAG2     --------->ANAC58     --------->At4g35610    ----------->ARR10<----------ID1            --------->ANAC58     <---------ZAT2 -------GT1     --------->ANAC46  <---------ANAC46     <---------YAB1                         <------MYB83 ---WOX13(1)    --------->ANAC58  <---------ANAC58     <---------TOE2(3)                      <------MYB46(1) >ATHB12 *TSS   --------->ANAC58  <---------ANAC58 <------------CBF --------->ZAT2           --------   actactcagattctctacaagaaaagacaaaaattggcctgttttagataagaaattgagattgaattgaagctgagaaactaatcggtttgagttcggt  7675400                                                  ------>MYB46(1)                                               --------->MYB46(3)                                               --------->DEAR3(2)                                          --------->At4g35610                                          <---------At4g35610                                         ------>NtERF2                                         <---------DEAR3(2)                    <---------AHL20(2)                         <---------MYB46(3)  --------->MYB52(1)       --------->DEAR3(2)                       <-------GAMYB    <---------DEAR3(1)            --------->MYB46(3)                  <----------DOF2     <-----------HVH21             --------->ARR14(2)               ------>ZmHOX2a(2)    <-------TEIL------->GAMYB       <---------ARR14(2)     --------->ARR11(3)              <------ZmHOX2a(2)   <---------GLK1(2)                ==============HOX2a_HOX2a        <             --------->ARR14(2)   --------->ARR11(1)        ------->GAMYB <---------ATHB12--------->RVE1(1)             <---------ARR14(2)<---------WOX13(1) ------>MYB83     <------ZmHOX2a(1)  <---------AHL20(2)          <---------ANAC46--------------------->WRI1      <-----------------AGL1      --------->AHL20(2) ->MYB59 <---------LBD16<---------MYB52(1)<------NtERF2  <-----------GT1  <------ZmHOX2a(2)<---------ARR11(3)   ttgagttgagtttcggatcgctttcggttattgatagattcgtcggctaaccgactgtataaccgaataggaaccgatcatttttttttttaatatctcg  7675500                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                              <------ZmHOX2a(2)                                             --------->ARR11(3)                                             --------->ARR14(2)                   --------->HSFB2a(2)                                <----------DOF2------>ZmHOX2a(2)                  <---------HSFB2a(2)                            <---------CCA1(2)<---------ARR11(3)           --------->At4g35610 -------                   --------->At5g28300       <---------ARR14(2)         --------->YAB1       <-------  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)      <---------GLK1(1)           <---------ICU4  <---------ARR11(3) ----------DOF2   ----------->GT1           --------->GLK1(1)          <---------ATHB12 --------->ARR11(3)   acctttacatttctgagagacagtgaattcatctcttttggagaagagatcccttctaacatgcctcgaactaatcatctccatctggaagatttatgac  7675600                                                                 <---------AHL20(2)                                                                 <---------YAB1                                                                <---------AHL20(2)                                                              <---------YAB1                                                   <---------ARR11(3)                                                   <---------AHL20(1)                                                   --------->ARR11(3) <---------AHL20(2)                                                  --------->AHL20(2)<---------YAB1                  <              <---------WRKY18(1)         --------->CCA1(2) <---------AHL20(2)                    ---             --------->WRKY12            --------->ARR11(3) --------->AHL20(2)                   <---             --------->WRKY38(1)     --------->YAB1--------->AHL20(1) --------->AHL20(2)        -----     <---------ATHB12    ---------->DOF2 <---------ARR11(3)<---------AHL20(2)                   <---- -->ATHB12   ----------->HVH21      <---------ATHB12       --------->AHL20(2)                  ------ --YAB1      --------->WRKY45     --------->WOX13(1)       <---------AHL20(1)          --------->GLK1(2)   tggaccaataactcgttgaccactcacaaaagttttcaatcaagatttacaaatatatcaaattatttttattaaaacaaacacatgagtttctatatga  7675700                             <---------ICU4                             -------->HAHB4                            <---------ATHB12                            <---------ATHB51                            --------->ICU4                          ------>MYB46(1)                          ------>MYB83                        --------------->AGL15                        <---------MYB59                                                             -                        <---------------AGL15                                                       <   --------->YAB1      --------->ANAC55(2)                                                       <---  <---------YAB1       =============================================================================MADS_MADS ---------CCA1(2)      <---------ANAC55(2)                                                <---------ANAC55(2) ------>YAB1           <-----------------AGL1        --------->ANAC46                     <------MYB83 ------YAB1            ----------------->AG  <---------HSFB2a(2)                          <------MYB46(1) ---->ARR11(3)       <-----------GT1         --------->HSFB2a(2)                          ----------- -----ARR11(3)   <---------YAB1             <-----------GT1   <---------ZAT6             --------->MYB59 --->YAB1     --------->AHL20(2)     <---------ARR11(3)       ----------->GT1     <-----------------AG   tcatatcataacccgatttattcttacctaataatgcaatatgttttctcgatacaaaccagaagtgtaaaacagattaaaacaaactcattaggtaaat  7675800  Previous    Next  AGI:  At4g13220.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN75300.1) Range:  from: 7674284    to: 7675309    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g13230.1    Description:  late embryogenesis abundant domain-containing protein / LEA domain-containing protein. similar to late embryogenesis abundant domain-containing protein / LEA domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G72100.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78519.1); contains domain PTHR23241:SF11 (PTHR23241:SF11); contains domain PTHR23241 (PTHR23241) Range:  from: 7675649    to: 7676676    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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