Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <------ZmHOX2a(2)                                 --------->ARR14(2)                                 <---------ARR14(2)                                <------ZmHOX2a(1)                         <------MYB46(1)                               <---------HSFB2a(1)                        <------MYB83                               --------->HSFB2a(1)                       --------->MYB59                               <---------HSFC1(2)                        <---------AtMYB61                   --------->ANAC58------>ZmHOX2a(2)                   <---------MYB52(1)   <------ZmHOX2a(1)            ----------->GT1    --------->HSFC1(2)                   <---------TOE2(3)     <---------TOE2(3)   ----------->GT1 --------->ANAC58<-------TEIL<---------LBD16 <----------ID1             <---------TOE1(3)   tcaagaagtaaaacctgtaacaagtaagcgagaaggatccatagaaaactctggagccattgaagacaacaaggttaggttttgaaaggtttaaggaaaa  7652200           --------->MYB46(3)           <---------MYB55(2)         <---------ARR14(2)         --------->ARR14(2)       --------->LBD16                                                                           ----      --------->ANAC46                                 <---------ARR11(3)                        ----     <---------LBD16                  <---------GLK1(1)--------->ARR11(3)       --------->KAN4(2)----   cccattcaccggaaccaccatggaagacaacattcttgggatttgtgtctccaacgagaccttgttttgactcttgtctgtttattctctctgtgattca  7652300                                    --------->AHL20(2)                                   --------->YAB1                                   --------->AHL20(2)                                   <---------AHL20(2)                          --------->LBD16                                               <---------YAB1                         --------->ANAC55(2)                                           <---------AHL20(2)           --------->ATHB12     --------->YAB1                                    <---------AHL20(2)          <---------AHL20(2)   <---------AHL20(2)                                 <---------AHL20(1)         <----------DOF2 ----------->GT1                                          --------->AHL20(1)     <---------MYB52(1)  <---------ANAC55(2) --------->ICU4         <-----------GT1  <---------YAB1   --------->DEAR3(1) --------->GLK1(2)  --------->AHL20(1)   <---------TOE2(3)   --------->AHL20(2) ----->ANAC58         <---------ARR14(2) --------->AHL20(2)  --------->MYB52(1)  <---------AHL20(2) ----->ANAC58         --------->ARR14(2) <---------AHL20(2)  <---------DOF5.7(2) --------->AHL20(2) ----->ANAC46        --------->RVE1(1)--------->YAB1         <-----------GT1  --------->YAB1  -------   agacaccgtcgttttattggaaaaaatccgtaaataataaaaataaaatgattttttggaaattaacgattatccatctataattttatttttattagat  7652400                     <---------AHL20(2)                 --------->AHL20(2)                <---------AHL20(2)                --------->AHL20(1)                                 <---------TOE2(3)                <---------AHL20(1)                                <-----------GT1            --------->AHL20(2)        ---------->DOF2        --------->ICU4            <---------AHL20(2)       <---------AHL20(2)   <---------YAB1     <-----------GT1 --------->AHL20(2)<---------TOE2(3)--------->YAB1           --------->LBD16 -->At4g35610--------->AHL20(2)      --------->AHL20(2) --------->AHL20(2)     <---------LBD16<------   gaaagtttcactatttaaaatatttaaaatttttaaaaattaaagaaaaattttaaaattataaatattaacattttatactccggattgaattttaaaa  7652500                                                                                              -------                                                                                              <------                                                                                            <--------                                                                              <xxxxxxxxxxxxxxxxxxxxxx                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                  <-------TEIL<xxxxxxxxxxxxxxxxxxxxxx                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 <-----------GT1    ----------->GT1                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <-----------GT1       xxxxxxxxxxxxxxxx>smallRNA(i)                                                    --------->YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                   --------->AHL20(2)        ------>NtERF2 --------->AHL20(2)                                                   <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                               --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                          --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                     <---------YAB1<---------AHL20(2)   xxxxxxxxxxxxxxxx>smallRNA(i)                               <---------AHL20(1) <---------AHL20(1)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               <---------ARR11(3) --------->AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ----------->GT1             --------->AHL20(1) --------->AHL20(1)<xxxxxxxxxxxxxxxxsmallRNA(i) ---YAB1                       --------->AHL20(2) <---------AHL20(2)xxxxxxxxxxxxxxxx>smallRNA(i)   ttgatgagttaaatcgatactaatacaagacgatatattacgaatgaaataatataattatctatatatacatttttgcagccattttgtaaaataaatc  7652600                                          <------------CBF                                         --------->ATHB51                                         <---------ICU4                                         <---------AHL20(2)                            --------->At4g35610                                                    --                          --------->MYB46(3)                                                  <------                         <---------At4g35610                                                  -------           xxxxxxxxxxxxxxxx>smallRNA(s)  -------->HAHB4                                       -------           xxxxxxxxxxxxxxxx>smallRNA(i)  -------->ATHB1              <---------WOX13(1)       <------         xxxxxxxxxxxxxxxx>smallRNA(s)    --------->ATHB12       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        xxxxxxxxxxxxxxxx>smallRNA(s) <---------AHL20(2)       --------->AHL20(1)              <------   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------ATHB51      <---------AHL20(2)              ------- -->ARR11(3)             <------NtERF2  --------->ICU4        --------->AHL20(2)   <---------AHL20(1) ---ARR11(3)        xxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------AHL20(1)   --------->ARR11(3) -AHL20(2)xxxxxxxxxxxxxxxx>smallRNA(s)  <---------YAB1       <---------ATHB12      --------->AHL20(1) xsmallRNA(si3) ------------>CBF     --------->AHL20(2)  ------------>CBF--------->MYB46(3)  -------- xsmallRNA(fl3)<-----------GT1    <----------DOF2   <----------DOF2--------->ATHB12<---------ARR11(3)   ttggagttagaacttatttacaatggcagccactgacttttaattattgattttcttttagcaataaattgattaacaaacaaaaaatatttcaaatata  7652700        <---------CCA1(2) ---------->CBF      --------->GLK1(1)                              --------->ARR11(3)              x ---AHL20(2)         <---------GLK1(1)                   <---------AHL20(2)                  -------- -->ARR11(3)        <---------ARR14(2)               <---------AHL20(2)                   <---------- -->AHL20(2)        --------->ARR14(2)               --------->AHL20(2)                 <---------AHL20(2) ---ARR11(3)      <---------TOE2(2)                 <---------AHL20(2)                  <---------YAB1 ---AHL20(1)   --------->ANAC58                     --------->ICU4  --------->AHL20(1) <---------AHL20(1) -->AHL20(1)   --------->ANAC58              <---------LBD16        <---------AHL20(1) --------->AHL20(1) ->AHL20(2)    --------->ANAC46            <---------GLK1(1)        <---------ARR11(3) --------->AHL20(2)   ttccaatctcatatatcacgcagatttcttcaaaatttgaactagatttcggaaattatttaaaacaaaaaatatttgacaaaacaaaatataattgcaa  7652800                                                    <---------AHL20(1)                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                          <---------ZAT14                                          <---------ZAT18                           <-------TEIL   --------->ZAT14                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                   ------->TEIL           --------->ZAT18 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    --------->At4g35610 ------------>CBF ---->CBF       --------->ANAC58    <-----------GT1 --------->AHL20(1) --CBF          --------->ANAC58   <-----------GT1 --------->AHL20(2)                      <---------AHL20(2)   tcccttcaaatgagcaaaacgcacataaatacattttttatcagttcactaaattttatttctccaatatttgaattagatttcgacaactatttaaaac  7652900                                    --------->LBD16                                   <---------ANAC58                                   ----------->GT1                                   <---------ANAC55(2)                                   --------->ANAC55(2)                                <---------ANAC46                                   <---------ANAC58                                   xxxxxxxxxxxxxxx                                   <---------ANAC46                     <---------RVE1(1)                                --------->ARR14(2)      --------->MYB52(1)<---------AHL20(2)        -                                <---------ARR14(2)     xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxx                               <---------GLK1(1)   --------->AHL20(2)  <---------GLK1(2)     xxxxxxxx                       <---------YAB1              <---------AHL20(2)  <---------ARR11(3)<xxxxxxxxxxx                       <---------AHL20(2)         --------->AHL20(2)   --------->ARR11(3)<xxxxxxxxxxx                      <---------AHL20(1)    <---------AHL20(2)<---------ZAT14      ----------->HVH21x                      --------->AHL20(1)    --------->AHL20(2)--------->ZAT14      xxxxxxxxxxxxxxxx>smallRNA(i)                      --------->AHL20(2)   --------->AHL20(2) <---------ZAT18  <-----------GT1    <--   aaaaatttgtttgacaaactaaaatataattgcaattccgtaaaaaaaaattttaaattagcggtgtactacagatttttttaacgggacgggtttggaa  7653000             <---------YAB1           --------->YAB1           <-----------GT1                                                                       <---           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                 ------         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                 <-----         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                 xxxxxxxx       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------AHL20(2)                            <-------     --------->ANAC55(2)                       <---------YAB1                              --------->ARR14(2)     <---------ANAC55(2)                       --------->AHL20(2)                        xxxxxxxxxxxx   <-----------GT1                            <---------AHL20(1)                     -------->HAHB4 < <xxxxxxxxxxxxxxxxsmallRNA(s)                 --------->AHL20(2)                     <---------ICU4 < xxxxxxx>smallRNA(se3)                        --------->AHL20(1)                     --------->ATHB51 ---------->GT1                              --------->YAB1                          <--------ATHB1 - xxxxxx>smallRNA(si3)             <---------AHL20(2)                                --------->ICU4  < xxxxxxxxxxxxxxx>smallRNA(le3) --------->AHL20(2)                                   <---------AHL20(2) xxxxxsmallRNA(s)              <---------AHL20(1)                                   <---------ATHB51x xxxxxxxxxxxxsmallRNA(se3)    <---------AHL20(2)              --------->AHL20(2)    <---------YAB1 -- xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   >>>>>>>>>GATA-1    <----------DOF2        --------->YAB1<---- ----ZmHOX2a(1)  --------->YAB1--------->AHL20(1)   <-----------GT1 <-----------GT1 --------->AHL20(2)   ggatgttacttaataacaattgtaaactataaatattttatagataaatataatttacagacttttatatatactaattttaaaaaataattgtttccgc  7653100  Previous    Next  AGI:  At4g13150.1    Description:  unknown protein Range:  from: 7651532    to: 7652585    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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