Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->LBD16             --------->ANAC55(2)            ------>ZmHOX2a(2)          <---------ARR14(2)          --------->ARR14(2)                ----------->GT1    --------->ARR14(2)            --------->ANAC58    --------->GLK1(2)             --------->ANAC58    <---------ARR14(2)            --------->ANAC46  <---------REM1(1)  <---------HSFB2a(1) <----------DOF2    --------->GLK1(2)                                          <  <---------HSFC1(2) <---------ANAC58   --------->ARR14(2)       <---------YAB1                     -  --------->HSFC1(2) <---------ANAC58   <---------ARR14(2)     <---------ICU4            ------------  --------->HSFB2a(1)<---------ANAC46   <---------GLK1(2)    <---------GLK1(2)           <----------- -YAB1  ------>ZmHOX2a(1)       ---------->DOF2 <---------AHL20(2)            ------->TEIL        ---   tggaagaatcctgatccgtagtggcttttagactcaaagccagaacctgttatattgtagctagattatgacaaactatgtatttggatgttttgtacaa  7632500 ---------AHL20(2) -------->AHL20(2)                         <---------YAB1                      --------->YAB1 --->AtSPL8                       <---------YAB1                         --------->TOE1(3) ----AtSPL8                       --------->ICU4    ----------->GT1      --------->TOE2(3)         -- ------>AHL20(2)         <-------TEIL    <-----------GT1          --------->YAB1    <-------TEIL  <--   atttatatatatcgaaaacaattaagctacatagtcatttttgttacaatagtttagtaaaaaactaattagaaacctcaagtatattcatataagaaaa  7632600                                                     ---------->DOF2                                                    <---------AHL20(2)                            <--                                                    --------->AHL20(2)               <---------KAN4(1)        <---------YAB1                        ----------->GT1                        --------->KAN4(1)      --------->YAB1                     <---------TOE1(2)                          <---------KAN4(2) <---------WOX13(1)                   <---------ANAC58       ----------->GT1       --------->YAB1 <-- ------->ATHB12     --------->AHL20(2)<---------ANAC46      >>>>>>>>>TBF1   ----------->RAV1(2)   --- -------YAB1     --------->YAB1       <---------ANAC58<---------TOE2(3)    ------->TEIL     ---------   atgatagatgataatacactcataaatttttaaaacgatgtcgtagtttggaaattaaagaagaagaaaaaacattgaacctgaagaataatccatggag  7632700                               --------->CCA1(2)                              --------->ARR11(1)                 <---------ANAC58        ---------->ID1                                       <------                <---------MYB46(3)   ------>ZmHOX2a(2)                                        -------               <---------TOE1(2)   <---------ARR11(3)                                      ------->PIF5             <---------ANAC58 <---------ARR11(3)                                           <-------PIF5 -------At4g35610<-------GAMYB--------->ARR14(2)                                     <-------PIF5 -------ZAT2 <---------ANAC58 <---------ARR14(2)             <---------ZAT18         ------->PIF5 ------>At4g35610<---------ANAC58  --------->ARR11(3)   --------------------->WRI1  --------->ANAC46 >AtLEC2<----------DOF2       --------->ARR11(3)  <-----------GT1                 <---------ALFIN1   agctgaacttcttttccttggttgagtttcaagatatgatcttgtccccatgtaacgacatagttcacatcgaaatctatagctccacgtccacgagctc  7632800                                                                --------->AHL20(2)   --------->KAN4(2)                                                         ------>ZmHOX2a(1)          <----------TaMYB80                                                <---------ARR11(3)                 <---------KAN4(2)                                                <---------AHL20(1)                 --------->ARR14(2)                                                --------->ARR11(3)              <---------ANAC46 ---ARR11(3)                                    --------->AHL20(1)       <-----------GT1  <---------LBD16 -->ARR11(3)                                    <-----------ARR10<---------AHL20(2)<---------ARR14(2)   ttgcattagcagtaaacatcaagaacaatactgaaactaattcaaaacaatatcttatcctattcattttatatgttaccttgagtatattctcagggag  7632900                                                         <---------ANAC58                                                         <---------ANAC46                                                         <---------ANAC58                                                         <------MYB83                                                         <------MYB46(1)                                                         <---------ANAC55(1)                                                        --------->MYB46(2)                                                        --------->MYB111(1)                                                        --------->MYB111(2)                                                        --------->MYB59                                                      <---------MYB52(1)                                                    <---------MYB46(3)                                                    --------->MYB52(2)                                                    --------->MYB111(1)                                                    --------->MYB46(2)     <---------At4g35610                          <--------P     --------->GLK1(1)                           <-------GAMYB     <---------GLK1(1)                           ------------>MYB.PH3(2)     --------->ZAT2   <---------ANAC58          ----------->GT1   <-----------GT1     --------->At4g35610               --------->AHL20(2)--------->ANAC55(2)     <---------ZAT2   <---------ANAC58 <---------AHL20(2)<---------ANAC55(2)   aagagagagctcccctacttatattcgtgtgtgttaggggattaattagagggttagttaggtgtttttttctaaatggaagtaattttctaaaattcta  7633000                                                                                 ----------->GT1       --------->TOE2(3)                 <---------WRKY45                      <------------CBF       --------->YAB1                    <---------WRKY38(1)               --------->ANAC58   <<<<<<<<<WRKY18                       <---------WRKY12                  --------->ANAC58         <  ------------>CBF                      --------->WRKY18(1)             --------->WRKY18(1)     <----   cctcgtcaatgttaacaaaactacatttgaaccaaaactttggtcaacaaaactacatttgaaccaaaattttggtcaagaaattgttaatagaaatgtt  7633100                                                                                      <---------ANAC58                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                        --------->AHL20(1)                                                                        --------->AHL20(2)                         <---------------AGL15                       --------->AHL20(2)            <------MYB83 --------------->AGL15              --------->YAB1   --------->YAB1            ----------->GT1        --------->GLK1(1)       <---------YAB1 --------->YAB1    <-----------GT1     ----------------->AGL2           --------->YAB1--------->YAB1 <---------ANAC58 ----------DOF2  <---------ANAC55(2)           --------->YAB1    >>>>>>>>>RAP2.2--------->DAG2 -------GT1 <------MYB46(1)    --------->YAB1  <---------ICU4 <---------CCA1(2)---------->DOF2   tccttttaactatttggttacataaaaccaaaatgagaattcttacctataatgacatatcatcatatctaaaaaataataaaaagtagcatgcattctc  7633200                                                                <---------ICU4                -------                                                               --------->ICU4                 <------                                                   ----------->GT1                      <------------                         <---------WRKY38(1)  <------MYB46(1)  <---------YAB1           -------------                <---------AHL20(2)      <---------YAB1--------->AHL20(2)               --------------               <---------YAB1         --------->YAB1  <---------AHL20(2)               --------------           ------->TEIL  <---------WRKY12     <------MYB83   <---------ICU4            <-------------        <---------ATHB12 <---------WRKY45--------->ATHB12  --------->ARR11(3)   --------->HSFB2a(2)      --------->WOX13(1)--------->WRKY18(1)   ----------->GT1--------->YAB1     <---------HSFB2a(2)   tcttatatcaatgaatttttattttggtcaacatactaaattatcatttggtatattaaaaaatcatgatgaacagagttatcgagaaaactatttttag  7633300                                                                                         <---------AHL20(2)                                                                                    <---------AHL20(1)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                <---------ZAT6                                               ------->TEIL                    <---------YAB1        --------->AHL20(2)                  <---------ATHB12                <---------YAB1  ----------->GT1                         --------->WOX13(1)              -------->ATHB1<---------AHL20(2) -->HSFB2a(2)                           <---------YAB1                    --------->ATHB12         -- ---HSFB2a(2)                         --------->GLK1(1)                   --------->ATHB51        <-- ---AGL15                             --------->CCA1(2)                   <---------ICU4--------->AHL20(1) -->AGL15                            --------->ARR11(3)                  --------->AHL20(2)  <------- --->AGL2                            <---------ARR11(3)                  <---------AHL20(2)  <------- --->AGL3                     --------->AHL20(2)   <---------YAB1        <---------ATHB51--------->AHL20(2) ----AGL3<---------AHL20(2)   <---------AHL20(2)  <-----------GT1        --------->ICU4 --------->AHL20(2)   aaattggttataaaatgactagtttgtcaaaatttataagatatcaatgaattttcattttggtgaacatactaaattattagtattaaatttaataact  7633400  Previous    Next  AGI:  At4g13090.1    Description:  xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative. Identical to Xyloglucan endotransglucosylase/hydrolase protein 2 precursor (XTH2) [Arabidopsis Thaliana] (GB:Q9SV60;GB:Q4PSI7); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT4G13080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23048.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Xyloglucan endotra Range:  from: 7631532    to: 7632867    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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