Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                  ---                                                                                          <--------P-                                                                                       --------->ALFIN1                                                                                       <---------AtMYB61                    --------->ANAC46                                                 --------->ALFIN1                    --------->ANAC58                                       <---------TOE2(3) <-------                    --------->ANAC58   <------ZmHOX2a(1)              <---------AHL20(2) <-------GAMYB       <---------LBD16             ------->GAMYB                      --------->AHL20(2)<---------MYB46(3) ----->YAB1----------->ARR10    --------->MYB52(1)        <---------At4g35610--------->ARR11(3)   --- ---TEIL ----------->GT1       --------->MYB46(3)         --------->At4g35610<---------ARR11(3) -----   catgacatatggggagaaatgcaagaaacaaaaacaaccgaggatgagtcttatgctcttagctaaaaacatttatttagattttaggtgtggttgcgac  7600100                                                                                     --------->ARR14(2)                                                                                  --------------->AGL15                                                                                  <---------------AGL15                                                                                 <---------ATHB12                                                                                 ----------------->AGL2                                                                                 <-----------------AGL2                                                                                 ----------------->AGL3                                                                                 <-----------------AGL3                                                                                 ----------------->AG                                  <----------CDC5                               -------->P                                 --------->ZAT2                                 ------>MYB83                                --------->ALFIN1                              <---------MYB111(1)        --------->AHL20(2)    <---------ANAC58                                --------->AtMYB61 ------->MYB46(3)             <---------ANAC46                               <---------MYB52(2) ------>ANAC58                <---------ANAC58                               --------->DEAR3(2) ------>GAMYB                 <---------bZIP60(2)                            --------->MYB46(3) ----- --ETT(1)    <-------TEIL  ----------->HVH21                              <------ZmHOX2a(1)     <---- ------>ANAC58            <---------WOX13(1)                          --------->LBD16<---------ARR14(2) ---->MYB46(3)          --------->ATHB12                        ---------->DOF2 ------>MYB46(1)>>>>>>   aaccaaaaaaaaaaatacattacaaacgattgacgtgctgagcgagaaattaagaagtcgagtccctaaacccgtaggaaccaaccatatatggtgagac  7600200                     --------->ANAC58                     --------->ANAC46       <---------At4g35610       --------->HSFB2a(1)          --------->TOE1(3)       --------->At4g35610          --------->YAB1        <------ZmHOX2a(1)       <---------HSFB2a(1)       <-----------GT1         --------->ANAC58      <---------ARR14(2)   --------->YAB1             <---------ZAT2      --------->GLK1(2)  --------->ANAC58             --------->ZAT2    ----------->GT1      --------->ARR14(2) --------->ANAC58 ------->GAMYB  --------->ANAC58                          <- ---->ZAT18          --------->ANAC58    --------->MYB46(3)         <---------WRKY18(1)            <- -----ZAT14         ------->GAMYB<<<<<<<<<GT-1  <---------MYB46(3) ----------->HVH21  --------->MYB52(1) >>>>>>>>>>>LFY    <---------ALFIN1 --------->TOE2(3) --------->At4g35610    --------->ICU4       <--   cactgtggaatctgccagacaacacccaagcatattaaccataaccacagtggctgagcaggaaactgtttgactggtaatgactcattaacagaaaaat  7600300                                                   <---------ICU4                                                   --------->ATHB51                                                   --------->ATHB12                          ----------->GT1         <---------YAB1                         <---------TOE2(3)        --------->ICU4                         <---------TOE1(3)      <---------ICU4 <---------AHL20(2)                         --------->MYB59       <------ZmHOX2a(2)                         --------->DAG2        <---------YAB1  --------->AHL20(2)                     --------->YAB1           <---------ARR11(3)                                 ----               ----------->GT1                --------->ARR11(3)         <<<<<<<<<<<<<<<<<LFY    ---- --------YAB1 --------->DAG2         ------>ZmHOX2a(2)        --------->AHL20(2)               ------ --------TOE2(3)    <---------YAB1 <---------ARR14(2)         --------->YAB1                  <------ ---------GT1---------->DOF2       --------->ARR14(2)         <---------AHL20(2)     ---------->DOF2   taacattgcagaaaaaaaagttataataaggtaaatggatcgtcccaagatcattattggataattaaaatcactggccagtggaattaaagcccaaaca  7600400                                                           ==========================================                                                           ==========================================                                                           =====================================MYC_MYB                                                           <---------ANAC58                                                           <---------bZIP60(2)                                                           --------->bZIP60(1)                                                           <---------ANAC55(1)                                                           <---------TGA1a                                                           <---------O2                                                           --------->O2                                                           >>>>>>>>>>HY5                                                           <---------ANAC58                                                           --------->TGA1a                                                           --------->ANAC55(2)                                                           <---------bZIP60(1)                                                           <---------ANAC55(2)                                                           <---------ANAC46                                                          <-----------------------TaNAC69(2)                                                          ----------->bZIP910(1)                                                          ----------->bZIP911(1)                                                          ----------->STF1                                                         <---------TGA2(2)                 --------->GLK1(2)                                                        ----------->HVH21         --------->MYB52(1)                                                      <---------At4g35610        <---------ALFIN1                                                      --------->At4g35610       --------->ZAT18                                              <---------SPL7                   --------->ANAC46                                             <---------ANAC58             <---------ARR14(2)       <-    --------->YAB1       --------->MYB46(3)  <---------ANAC58       --------->GLK1(2)     <---------GLK1(2)   <---------YAB1       =============================================MYC_MYB  <---------LBD16 <------ ----->ANAC58           -------->P           <---------ANAC46      <---------GLK1(2)    ----------->ARR10 ----->ANAC58          --------->WOX13(1) --------->bZIP60(1)      --------->ARR14(2)  <--------P  == ---->DOF2           <------ZmHOX2a(2)    <---------bZIP60(1)      <---------ARR14(2) <---------MYB52(1) ---ATHB12          <---------ARR11(3) <---------ATHB12 ----------->TGA1  --------->ARR14(2)  =======   agcccatgataactcaaaactagatcaaccagtaatggcccatgatgtcgtacttgaggtgacgtggcaaattctgaattcgcgcaccggtagattcttt  7600500                                          --------->ARR14(2)                                          <---------ARR14(2)                                  >>>>>>>>>>HY5                                  <---------ANAC55(1)                                  <---------ANAC58                                  <---------ANAC46                                  <---------O2                                  --------->O2                                  --------->ANAC55(2)                                  --------->TGA1a                                  <---------TGA1a                                  <---------bZIP60(2)                                  <---------bZIP60(1)                                  --------->bZIP60(1)                                  <---------ANAC55(2)                                  <---------ANAC58                                  ===============================bZIP_DOF                  ------------>CBF===============================bZIP_DOF      --------->LBD16            ----------->STF1     <---------ANAC58            ----------->bZIP910(1)     <---------ANAC46            ----------->bZIP911(1)     <---------ANAC58           <---------TGA2(2)    <---------LBD16            ----------->HVH21 ====bZIP_DOF   <----------DOF2----------->TGA1    <---------ALFIN1          <---------At5g28300 ====bZIP_DOF   ============================bZIP_DOF                        <-----------GT1 ---------DOF2 <---------DAG2--------->At4g35610  --------->MYB46(3)     <----------DOF2       ------ ----DOF2 <-----------GT1    <---------At4g35610*TSS               <-----------GT1            ------>NtERF2 ===========================================bZIP_DOF  <---------DAG2<---------At5g28300       ------- ===========================================bZIP_DOF  <----------DOF2    <---------DAG2     <--------   tctttttccgtataacacctttcaatacttgaggtgacgtggcaaattcacaaccactttttatatgatataccgcttttaccccttaagcctctccgcg  7600600                           <---------MYB46(3)                          <---------MYB52(1)                         <-------GAMYB                 <------NtERF2                    --------->MYB46(3)               <---------DEAR3(1)                   --------->ANAC58                 <------NtERF2                   --------->ANAC58               <---------DEAR3(1)               --------->TOE2(3)           <------ZmHOX2a(2)                   <---------ANAC46------ --->ANAC46  --------->ARR11(3)           <---------ARR11(3)              <---------ICU4       ------ -->LBD16    <---------ARR11(3)           --------->ARR11(3)       --------->TOE2(3)           ------ -LBD16      --------->GLK1(2)           --------->GLK1(1)         --------->TOE1(3)          -------   taaaaccgagaacaaaatcttaagcaccgttgttccgattcagagatcatcgtcgtcgtcgttcagaaaccttcaaaaatggctggaaaactcatgcacg  7600700                                --------->LBD16                              --------->RAP2.3(1)                              --------->ATERF1(1)                              <------NtERF2                              <---------LBD16                             ------>NtERF2                             --------->ABI4(1)                             <---------ATERF1(1)                            <---------ATERF1(2)                            --------->RRTF1(2)                            --------->RAP2.3(3)                            --------->RAP2.3(2)                            --------->RRTF1(3)                            <---------DEAR3(1)                            --------->ATERF1(2)                            --------->DEAR3(1)                           <---------ABI4(2)                           <------NtERF2                           --------->ATERF1(1)                           --------->RAP2.3(1)                           --------->DEAR3(2)                           --------->ORA47(2)                           --------->ERF1                           --------->DEAR4(2)                           --------->RAP2.6(1)                           --------->RRTF1(1)                          ------>NtERF2                          <---------RAP2.3(1)                          <---------ATERF1(1)                          <---------ORA47(2)                          <---------ERF1                          <---------DEAR4(2)                          <---------RAP2.6(1)                          <---------RRTF1(1)                         <---------RRTF1(3)                         <---------RAP2.3(3)                         <---------RRTF1(2)                         <---------PCF2                         --------->DEAR3(1)                         --------->TCP16(1)                         <---------DEAR3(1)                         <---------RAP2.3(2)                        <------NtERF2                        --------->RAP2.3(1)                        --------->ATERF1(1)                        <---------ABI4(2)                       <---------ERF1                       <---------ATERF1(1)                       <---------RAP2.3(1)                      <---------DEAR3(1)                      --------->ALFIN1                      <---------RAP2.3(3)                     --------->ATERF1(1)                    --------->ABI4(2)                    <---------MYB46(3) --------->ZAT14    --------->MYB55(2)                        <---------AHL20(1) --->ANAC58        <---------AtMYB61                  <----------DOF2 --->ANAC46        --------->ALFIN1             <---------CCA1(2) --->ANAC58        <---------DEAR3(1)           <---------At4g35610  ------>ZmHOX2a(1) >TEIL         <---------At5g28300     <---------TOE2(3)      <---------ARR11(3)                <----   ctcttcagtacaactcttacggtggtggcgccgccggattagaggttttcatctctcttttctatatattcctctaaactactgtgttattgcgatttga  7600800                                                                                               ------                                                                                              <------                                                                                            <--------                                                                                    <-----------RAV1(1)                                                                                    =================                                                      <---------ANAC58          <---------ARR14(3)                                                      <---------ANAC46          --------->ARR11(3)                                                      <---------ANAC58          --------->ARR14(3)                                                     <-------TEIL               <---------GLK1(2)         <-----------GT1   --------->AHL20(2)  ------>NtERF2     <---------YAB1 <---------ARR11(3) -----GLK1(2)              <---------AHL20(2)  <---------At4g35610              <---------ARR14(2) --   ttctctgtatttatcgataccgtctcgattttatttgtattcttctctctgccgatgcgttgattttttgataaacttagaagattttgttgcctcagat  7600900                                                                        --------->ICU4                                                                        <---------YAB1      >>>>>>>>>>>>>>>>>LFY                                            <---------ICU4 --->ARR11(3)                                                         --------->YAB1 ---At4g35610                                                        --------->ICU4 ---RAV1(2)                                                          <---------ATHB12 ===RAV    <---------ATHB12                           <---------ANAC55(2)--------->ATHB12 --------->GT1                        ---------->DOF2 --------->ANAC55(2)<---------ICU4            <-   gttgaaaaatccaatgttttcatcaatttgatttggattgtaaaggctactagattacatgataaaacacaatcatgattgtaaatgattttcttcattt  7601000  Previous    Next  AGI:  At4g13010.1    Description:  oxidoreductase, zinc-binding dehydrogenase family protein. Identical to Putative chloroplastic quinone-oxidoreductase homolog [Arabidopsis Thaliana] (GB:Q9SV68); similar to oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT1G23740.1); similar to unknown [Populus trichocarpa] (GB:ABK96194.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol Range:  from: 7600548    to: 7602726    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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